mRNA_M-pyrifera_M_contig122721.4666.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig122721.4666.1 vs. uniprot
Match: D2VRL3_NAEGR (Predicted protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VRL3_NAEGR) HSP 1 Score: 162 bits (410), Expect = 4.440e-44 Identity = 84/165 (50.91%), Postives = 101/165 (61.21%), Query Frame = 1
Query: 1 CNDTLPHVRDGYPTGPLDTNSDGTNTISSATADDVEYGRHETLEYYNMCVGRERNRGLYTAD-------RTVTSTRATHTRQNENGNRHGFECGEERDYYPYWAPSPWRDIAVLTTDTKACPYYQRESQNVRGVGYCTGASGL-QPIT-ESQCTSGGGTWKIRGA 468
CNDT P++RDG P D T+TIS AT ++ YG HE +EYY C R RN GLY AD R + ++ A TRQN NGNRHG+EC EERDYYPYW P+PW+DIA+ T +T C +YQ S+NVRG G C SG P E C SGG W +R A
Sbjct: 115 CNDTAPNLRDGTPENEKDA---ATDTISEATNNNPRYGLHEPMEYYMKCRTRRRNSGLYIADQRQENWGRLLENSPAVETRQNPNGNRHGWECPEERDYYPYWHPTPWKDIAIFTFNTSMCQWYQENSENVRGRGECLQESGAPSPFNNEKSCISGGHNWHVRPA 276
BLAST of mRNA_M-pyrifera_M_contig122721.4666.1 vs. uniprot
Match: A0A1Y1I4T4_KLENI (NADPH oxidase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I4T4_KLENI) HSP 1 Score: 150 bits (378), Expect = 5.240e-39 Identity = 76/133 (57.14%), Postives = 94/133 (70.68%), Query Frame = 1
Query: 70 TNTISSATADDVE--YGRHETLEYYNMCVGRERNRGLYTADRTVTST-RATHTRQNENGNRHGFECGEERDYYPYWAPSPWRDIAVLTTDTKACPYYQRESQNVRGVGYCTGASGLQPITESQCTSG--GGTW 453
T TI++ +A DV+ GRHE+ +YY+ C R+RNRGL+TADR + AT TRQNENGNR+GFEC EERDYYPYW P+ W D AVLT+DT CPYY RES+NV+G G+C S Q ++ C G GGTW
Sbjct: 129 TTTITATSAGDVDPSSGRHESFQYYSDCRARQRNRGLFTADRNMRDDIGATSTRQNENGNRYGFECPEERDYYPYWHPTMWNDAAVLTSDTTRCPYYARESENVKGRGFC---SLPQYNNQAACEGGTAGGTW 258
BLAST of mRNA_M-pyrifera_M_contig122721.4666.1 vs. uniprot
Match: UPI000644D9C9 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644D9C9) HSP 1 Score: 147 bits (371), Expect = 1.740e-38 Identity = 77/156 (49.36%), Postives = 96/156 (61.54%), Query Frame = 1
Query: 7 DTLPHVRDGYPTGPLDT-NSDGTNTISSATADDVEYGRHETLEYYNMCVGRERNRGLYTADRTVTSTRATHTRQNENGNRHGFECGEERDYYPYWAPSPWRDIAVLTTDTKACPYYQRESQNVRGVGYCT----GAS--GLQPITESQCTSGGGTW 453
D + VRDG LD N +S D YG HE+ +Y C R RN+GL+TA++T+ + A TRQNE G+++G+EC EERDYYPYWAPSPW+DIA+ T DT C YQRESQNVR YC GA+ L PITE +CT+ G W
Sbjct: 108 DPMTQVRDGTTVDNLDADNITAIGAVSGGAGTDFVYGMHESYYHYTNCTTRARNQGLFTANKTLDDS-ARFTRQNEGGDQYGWECPEERDYYPYWAPSPWKDIAIFTGDTDQCSLYQRESQNVRSKFYCVLPGVGATRDNLAPITEVECTAQNGKW 262
BLAST of mRNA_M-pyrifera_M_contig122721.4666.1 vs. uniprot
Match: A0A7S3YVQ7_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YVQ7_9EUKA) HSP 1 Score: 147 bits (370), Expect = 4.400e-38 Identity = 86/207 (41.55%), Postives = 108/207 (52.17%), Query Frame = 1
Query: 1 CNDTLPHVRDGYPT--------------------GP----------------LDTNSDGTNTISSATADD-----------VEYGRHETLEYYNMCVGRERNRGLYTADRTVTSTRATHTRQNENGNRHGFECGEERDYYPYWAPSPWRDIAVLTTDTKACPYYQRESQNVRGVGYC--TGASG--LQPITESQCTSGGGTWKIRGA 468
CNDTLP VRDGYP+ P ++TN +GTNTI + ++D +EYG HE ++Y C RN LYT+D+ + A +TRQN NG R G EC EERDYYPYW P PWRDIAVL ++ C +YQ SQNV VGYC T AS L PI+++ C + G TW+ R A
Sbjct: 105 CNDTLPAVRDGYPSRNQADGGDCWDSSNNNNQNGAPNVACNTQTTWAARRFRVNTN-EGTNTIPTGRSNDFYMATDSANDGIEYGMHENYDFYRTCETTSRNTRLYTSDQKLKGNSAKYTRQNPNGGRRGLECPEERDYYPYWRPQPWRDIAVLVSNITYCQHYQETSQNVNDVGYCDCTSASNNNLCPISQAGCAAKGYTWRTRSA 310
BLAST of mRNA_M-pyrifera_M_contig122721.4666.1 vs. uniprot
Match: UPI0003F0DF2F (protein DD3-3-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F0DF2F) HSP 1 Score: 146 bits (369), Expect = 5.930e-38 Identity = 73/135 (54.07%), Postives = 90/135 (66.67%), Query Frame = 1
Query: 1 CNDTLPHVRDGYPTGPLDTNSDGTNTISSATADDVEYGRHETLEYYNMCVGRERNRGLYTADRTVTSTRATHTRQNENGNRHGFECGEERDYYPYWAPSPWRDIAVLTTDTKACPYYQRESQNVRGVGYCTGASG 405
C+D +VRDG T + T D N +D+EYG E +YYN C RERN+GL+TAD+ V T A +TRQN NGNR+G+EC EERDYYPYW PSPWRDIAV+T + + CPYYQ+ES NV+ C SG
Sbjct: 45 CHD---NVRDGAVTTTIPT--DLNNCYGYDCNNDLEYGMQENYDYYNNCKLRERNQGLFTADQNVKGTTAKYTRQNPNGNRYGYECPEERDYYPYWQPSPWRDIAVMTNNARMCPYYQQESANVKSKWACVVPSG 174
BLAST of mRNA_M-pyrifera_M_contig122721.4666.1 vs. uniprot
Match: A0A6A5BY55_NAEFO (Uncharacterized protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BY55_NAEFO) HSP 1 Score: 143 bits (361), Expect = 2.870e-37 Identity = 73/162 (45.06%), Postives = 93/162 (57.41%), Query Frame = 1
Query: 1 CNDTLPHVRDGYPTGPLDTNSDGTNTISSATADDVEYGRHETLEYYNMCVGRERNRGLYTADRT-------VTSTRATHTRQNENGNRHGFECGEERDYYPYWAPSPWRDIAVLTTDTKACPYYQRESQNVRGVGYCTGASGLQPIT--ESQCTSGGGTWKI 459
C+DT P +RDG P D+ T+TI ++ YG HE +EYY C R RN GLY AD+ + ++ ATHTRQN NG RHG+EC EERDYYPYW P+PW+DIA+ T +T C +YQ S+NV G C G + E C S G W +
Sbjct: 65 CDDTSPGLRDGTPQSETDS---ATDTIDEKNNNNTRYGMHEPMEYYKKCSTRRRNNGLYLADQKQQNPGFLLPTSPATHTRQNANGARHGWECPEERDYYPYWHPTPWKDIAIFTHNTSMCEWYQANSENVVGRYECLTNDGKPTVYNGEQDCISEGNLWVL 223
BLAST of mRNA_M-pyrifera_M_contig122721.4666.1 vs. uniprot
Match: A0A7S0ZV96_NOCSC (Hypothetical protein (Fragment) n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S0ZV96_NOCSC) HSP 1 Score: 141 bits (355), Expect = 7.070e-37 Identity = 75/161 (46.58%), Postives = 95/161 (59.01%), Query Frame = 1
Query: 1 CNDTLPHVRDGYPTGPLDTNSDGTNTISSATADDVEYGRHETLEYYNMCVGRERNRGLYTADRTVTST-RATHTRQNENGN-----RHGFECGEERDYYPYWAPSPWRDIAVLTTDTKA-CPYYQRESQNVRGVGYCTGASGLQPITESQCTSGGGTWKIR 462
C P +RDGY G +T + A+A D+E G HE L+YY C RERNRGLYTAD+ V AT TRQN +GN RHG EC EERDYYPYW P+PW DIA+ T + + C +Y+ ESQNV+ G+C P T C + G +WK++
Sbjct: 115 CESDNPDLRDGYRRGKQNTAGGEVEPPNEASASDLELGEHEPLDYYLDCRLRERNRGLYTADQDVVDAFGATATRQNPDGNVVATERHGMECPEERDYYPYWHPTPWHDIAIFTDEPEERCHFYESESQNVQEKGFCNDPQFNNPAT---CEANGASWKVQ 272
BLAST of mRNA_M-pyrifera_M_contig122721.4666.1 vs. uniprot
Match: A0A0D2X2I4_CAPO3 (Uncharacterized protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2X2I4_CAPO3) HSP 1 Score: 140 bits (354), Expect = 7.830e-36 Identity = 75/168 (44.64%), Postives = 95/168 (56.55%), Query Frame = 1
Query: 1 CNDTLPHVRDGYPTGPLDTNSDGTNTISSATADDVEYGRHETLEYYNMCVGRERNRGLYTADRTVTSTRATHTRQNENGNRHGFECGEERDYYPYWAPSPWRDIAVLTTDTKACPYYQRESQNVRGVGYCTGAS------------GLQPITESQCTS-----GGGTW 453
C+D +RDG T + T + + T DVEYGRHE+L +YN C R+RN+GL+TA++ + A TRQN G R G+EC EERDYYPYW P+ WRDIAVLT D CPYY +SQNV+ YC G PIT++QC + GTW
Sbjct: 94 CDD---RIRDGTTTNTIPTTPNQCENNNCDT--DVEYGRHESLNWYNYCKYRQRNKGLFTANQNLNGDSARFTRQNNAGTRRGYECPEERDYYPYWYPTVWRDIAVLTNDATMCPYYTAQSQNVKSRWYCAAPQAFINDRASRNQEGFIPITKAQCEAIYFAGQNGTW 256
BLAST of mRNA_M-pyrifera_M_contig122721.4666.1 vs. uniprot
Match: UPI001CFDCFA0 (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFDCFA0) HSP 1 Score: 139 bits (350), Expect = 1.580e-35 Identity = 73/160 (45.62%), Postives = 91/160 (56.88%), Query Frame = 1
Query: 1 CNDTLPHVRDGYPTGPLDTNSDGTNTISSATADDVEYGRHETLEYYNMCVGRERNRGLYTADRT-------VTSTRATHTRQNENGNRHGFECGEERDYYPYWAPSPWRDIAVLTTDTKACPYYQRESQNVRGVGYCTGASGLQPIT--ESQCTSGGGTW 453
C+DT P +RDG P N T+TI ++ YG HE +EYY C R RN GLY AD+ + ++ AT TRQN NG RHG+EC EERDYYPYW P+PW+DIAV T +T C +YQ S+NV G C G + E C S G +W
Sbjct: 117 CDDTSPGLRDGTPESE---NDPATDTIDEKNNNNTRYGMHEPMEYYKKCNTRRRNNGLYLADQKQQNPGFLLPTSPATRTRQNPNGARHGWECPEERDYYPYWHPTPWKDIAVFTHNTSMCEWYQANSENVVGRYECLTRDGNPTVYNGEQDCISEGHSW 273
BLAST of mRNA_M-pyrifera_M_contig122721.4666.1 vs. uniprot
Match: A0A6A5CI59_NAEFO (Uncharacterized protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5CI59_NAEFO) HSP 1 Score: 139 bits (349), Expect = 2.530e-35 Identity = 70/140 (50.00%), Postives = 86/140 (61.43%), Query Frame = 1
Query: 1 CNDTLP----------HVRDGYPTGPLDTNSDGTNTISSATADDVEYGRHETLEYYNMCVGRERNRGLYTADRTVTSTRATHTRQNENGNRHGFECGEERDYYPYWAPSPWRDIAVLTTDTKACPYYQRESQNVRGVGYC 390
CNDT+ VRDG PT D+N D T+TIS +T +D+ +G+HE + Y C R+RN+GLY ADR + A TRQN G R GFEC EE DYYPYW SPW DIA+ T++T C +YQ SQNV G G C
Sbjct: 113 CNDTVVGTDKVYGNYYSVRDGIPT---DSNDDATDTISESTQNDLRFGQHEPFDNYKKCTIRDRNKGLYIADRGLGGNSAIFTRQNNGGERFGFECTEEHDYYPYWHFSPWVDIAIFTSNTSMCQWYQENSQNVVGRGEC 249 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122721.4666.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig122721.4666.1 >prot_M-pyrifera_M_contig122721.4666.1 ID=prot_M-pyrifera_M_contig122721.4666.1|Name=mRNA_M-pyrifera_M_contig122721.4666.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=156bp CNDTLPHVRDGYPTGPLDTNSDGTNTISSATADDVEYGRHETLEYYNMCVback to top mRNA from alignment at M-pyrifera_M_contig122721:6..524- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig122721.4666.1 ID=mRNA_M-pyrifera_M_contig122721.4666.1|Name=mRNA_M-pyrifera_M_contig122721.4666.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=519bp|location=Sequence derived from alignment at M-pyrifera_M_contig122721:6..524- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig122721:6..524- >mRNA_M-pyrifera_M_contig122721.4666.1 ID=mRNA_M-pyrifera_M_contig122721.4666.1|Name=mRNA_M-pyrifera_M_contig122721.4666.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=936bp|location=Sequence derived from alignment at M-pyrifera_M_contig122721:6..524- (Macrocystis pyrifera P11B4 male)back to top |