mRNA_M-pyrifera_M_contig122592.4652.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig122592.4652.1 vs. uniprot
Match: A0A2D8LXI7_9ACTN (Histidine kinase n=7 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8LXI7_9ACTN) HSP 1 Score: 231 bits (588), Expect = 4.550e-71 Identity = 125/175 (71.43%), Postives = 146/175 (83.43%), Query Frame = 1
Query: 1 LSPVGDVRRAAESLAAGELDTRVDMPADHDLASLATSFNGMATSLEDRIERDARFASEVSHELRSPLMTLSASVEVINNSREAMPERTQQALTLLNDDVQRFTQLVEDLLEISRFDVGTASLQPEPLGVVEFVRRAVEHSARPEALVTATPEVIDLVIAADKRRLGQVIANLIQN 525
L+P+G+VR AAESLAAGELDTR+D PAD DLASL SFNGMA SLEDRIERDARFASEVSHELRSPLMTL+ASVEV+NN+R++M ER Q AL LL DDV RFT LVEDLLEISR+DVGTASL+ EP+ +VEFVR++V+HS P +V + LV+A DKRRL QV+ANL+ N
Sbjct: 191 LTPLGEVRLAAESLAAGELDTRLDPPADADLASLTASFNGMARSLEDRIERDARFASEVSHELRSPLMTLNASVEVLNNNRDSMTERNQTALDLLTDDVTRFTALVEDLLEISRYDVGTASLRAEPIDLVEFVRQSVDHS--PYDVVIDVGALQYLVVAGDKRRLAQVVANLVDN 363
BLAST of mRNA_M-pyrifera_M_contig122592.4652.1 vs. uniprot
Match: A0A6B1AY82_9ACTN (Histidine kinase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1AY82_9ACTN) HSP 1 Score: 225 bits (573), Expect = 2.750e-69 Identity = 119/175 (68.00%), Postives = 140/175 (80.00%), Query Frame = 1
Query: 1 LSPVGDVRRAAESLAAGELDTRVDMPADHDLASLATSFNGMATSLEDRIERDARFASEVSHELRSPLMTLSASVEVINNSREAMPERTQQALTLLNDDVQRFTQLVEDLLEISRFDVGTASLQPEPLGVVEFVRRAVEHSARPEALVTATPEVIDLVIAADKRRLGQVIANLIQN 525
L+P+ D+R AAESLAAG+L TR+D PAD DLASL+ SFNGMA SLEDRI+RDARFASEVSHELRSPLMT SAS EV+NN R M R+Q AL LL DD+ RFTQLVE+LLEISR+DVGTA+LQ EP+ EFVR A+ +S RP+ ++ + + LVI ADKRRL QVIANLI N
Sbjct: 149 LTPLADIRAAAESLAAGDLKTRLDPPADADLASLSASFNGMAQSLEDRIDRDARFASEVSHELRSPLMTFSASAEVLNNDRYQMSHRSQTALALLTDDIARFTQLVENLLEISRYDVGTAALQAEPVFFAEFVRHAISYSTRPDIALSVSEDGESLVIVADKRRLAQVIANLIDN 323
BLAST of mRNA_M-pyrifera_M_contig122592.4652.1 vs. uniprot
Match: A0A3M2GVI6_ACTSX (Histidine kinase n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GVI6_ACTSX) HSP 1 Score: 221 bits (562), Expect = 4.810e-67 Identity = 117/175 (66.86%), Postives = 141/175 (80.57%), Query Frame = 1
Query: 1 LSPVGDVRRAAESLAAGELDTRVDMPADHDLASLATSFNGMATSLEDRIERDARFASEVSHELRSPLMTLSASVEVINNSREAMPERTQQALTLLNDDVQRFTQLVEDLLEISRFDVGTASLQPEPLGVVEFVRRAVEHSARPEALVTATPEVIDLVIAADKRRLGQVIANLIQN 525
L+P+G+VR AAESLAAGELDTR+D PAD DLA+L SFN MA +LEDRIERDARFAS VSHELRSPLMTL+AS+EV+ NS + +P R+Q AL LL+ D+ RF QLV+DLLEISR+DVGTA+L EP+ + EFVR+AV HS P+A V T DLV+ ADKRRL QV+ANL+ N
Sbjct: 198 LAPLGEVRAAAESLAAGELDTRLDPPADADLAALVASFNEMARALEDRIERDARFASAVSHELRSPLMTLTASLEVLRNSYDELPPRSQTALDLLDADISRFQQLVQDLLEISRYDVGTAALDAEPVLLSEFVRQAVAHSTTPDARVIVTDTAEDLVVLADKRRLAQVLANLLDN 372
BLAST of mRNA_M-pyrifera_M_contig122592.4652.1 vs. uniprot
Match: A0A7X6AR84_9ACTN (Histidine kinase (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X6AR84_9ACTN) HSP 1 Score: 189 bits (481), Expect = 3.900e-57 Identity = 106/175 (60.57%), Postives = 122/175 (69.71%), Query Frame = 1
Query: 1 LSPVGDVRRAAESLAAGELDTRVDMPADHDLASLATSFNGMATSLEDRIERDARFASEVSHELRSPLMTLSASVEVINNSREAMPERTQQALTLLNDDVQRFTQLVEDLLEISRFDVGTASLQPEPLGVVEFVRRAVEHSARPEALVTATPEVIDLVIAADKRRLGQVIANLIQN 525
L PV VR AAESLAAGELDTR+D PAD DLASLA SFN MA SLE RIERDARFASEVSHELRSPLMTL+AS+EV+NN RE + R+Q AL SRFDVGTA+L+ EP+ + EF+R+AV+HS RP+ V A VI DKRRL QV+ANL+ N
Sbjct: 53 LRPVAQVRAAAESLAAGELDTRLDPPADADLASLAASFNEMARSLEYRIERDARFASEVSHELRSPLMTLNASIEVLNNDRERLSARSQTALXXXXXXXXXXXXXXXXXXXXSRFDVGTAALRAEPILLAEFIRQAVQHSTRPDIAVDAQTTAEHTVIMGDKRRLAQVVANLVDN 227
BLAST of mRNA_M-pyrifera_M_contig122592.4652.1 vs. uniprot
Match: A0A520Y0Z8_9ACTN (Histidine kinase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A520Y0Z8_9ACTN) HSP 1 Score: 194 bits (492), Expect = 9.140e-57 Identity = 102/175 (58.29%), Postives = 131/175 (74.86%), Query Frame = 1
Query: 1 LSPVGDVRRAAESLAAGELDTRVDMPADHDLASLATSFNGMATSLEDRIERDARFASEVSHELRSPLMTLSASVEVINNSREAMPERTQQALTLLNDDVQRFTQLVEDLLEISRFDVGTASLQPEPLGVVEFVRRAVEHSARPEALVTATPEVIDLVIAADKRRLGQVIANLIQN 525
L P+ DV AAE++A G L+TR+D D DL+SLA SFN MA LE+RI+RDARFASEVSHELRSPLMTL+ASVEV+ N+R MP R Q AL LL+ D+ RF LVEDLLEISR+DVGTA LQ + + EFVR AV+ ++ + V +P+ ++++ ADKRRL +V+ANL+ N
Sbjct: 190 LRPLRDVGEAAEAIAGGRLETRLDTKGDEDLSSLAASFNEMAGGLEERIQRDARFASEVSHELRSPLMTLAASVEVLENARADMPPRAQTALELLSSDIHRFQNLVEDLLEISRYDVGTADLQTDAILFAEFVRAAVDVASSSDIPVEVSPDAENVILEADKRRLARVVANLVDN 364
BLAST of mRNA_M-pyrifera_M_contig122592.4652.1 vs. uniprot
Match: A0A538DK25_9ACTN (Histidine kinase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538DK25_9ACTN) HSP 1 Score: 193 bits (490), Expect = 1.550e-56 Identity = 102/173 (58.96%), Postives = 129/173 (74.57%), Query Frame = 1
Query: 7 PVGDVRRAAESLAAGELDTRVDMPADHDLASLATSFNGMATSLEDRIERDARFASEVSHELRSPLMTLSASVEVINNSREAMPERTQQALTLLNDDVQRFTQLVEDLLEISRFDVGTASLQPEPLGVVEFVRRAVEHSARPEALVTATPEVIDLVIAADKRRLGQVIANLIQN 525
P+GDV AAE++A G LDTR+ PAD DLASL SFN MA +L++R+ERDARFASEVSHELRSPLMTL+ASV V+ + +PER Q A+ LL+ D+QRF QLVEDLLEISRFDVGTA L+ E L +VEF R+AV ++ + P + +I ADKRRL +V+ NL++N
Sbjct: 175 PLGDVAAAAEAIAGGRLDTRLVPPADRDLASLTASFNEMAGALQERVERDARFASEVSHELRSPLMTLTASVAVLETRMDELPERAQVAVELLSSDLQRFKQLVEDLLEISRFDVGTARLELEELNLVEFTRQAVSRASNEPVPIIYDPAMESTIILADKRRLARVLYNLVEN 347
BLAST of mRNA_M-pyrifera_M_contig122592.4652.1 vs. uniprot
Match: A0A7Y2D8I4_9ACTN (Histidine kinase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2D8I4_9ACTN) HSP 1 Score: 191 bits (485), Expect = 9.160e-56 Identity = 103/175 (58.86%), Postives = 131/175 (74.86%), Query Frame = 1
Query: 1 LSPVGDVRRAAESLAAGELDTRVDMPADHDLASLATSFNGMATSLEDRIERDARFASEVSHELRSPLMTLSASVEVINNSREAMPERTQQALTLLNDDVQRFTQLVEDLLEISRFDVGTASLQPEPLGVVEFVRRAVEHSARPEALVTATPEVIDLVIAADKRRLGQVIANLIQN 525
LSP+ ++ AA ++A G LDTR+D AD DL L++SFN MA +LE RI+RDARFA+EVSHELRSPLMTL+AS+EV+NN++ + R AL LL+DD+ RF QLVEDLLEISRFDVG+ASLQ E + V EFVR+A+ + + V P LVI ADKRRL QV+ANL++N
Sbjct: 188 LSPLREISDAAAAIAGGRLDTRLDPKADRDLERLSSSFNEMAGALEHRIQRDARFATEVSHELRSPLMTLTASMEVLNNTKAELSPRAATALQLLDDDINRFAQLVEDLLEISRFDVGSASLQVEEIAVCEFVRQAIRLATTDDIPVLCPPRSEALVIEADKRRLAQVMANLVRN 362
BLAST of mRNA_M-pyrifera_M_contig122592.4652.1 vs. uniprot
Match: A0A848UHH2_9ACTN (Histidine kinase n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A848UHH2_9ACTN) HSP 1 Score: 190 bits (483), Expect = 3.200e-55 Identity = 106/173 (61.27%), Postives = 129/173 (74.57%), Query Frame = 1
Query: 7 PVGDVRRAAESLAAGELDTRVDMPADHDLASLATSFNGMATSLEDRIERDARFASEVSHELRSPLMTLSASVEVINNSREAMPERTQQALTLLNDDVQRFTQLVEDLLEISRFDVGTASLQPEPLGVVEFVRRAVEHSARPEALVTATPEVIDLVIAADKRRLGQVIANLIQN 525
PVG +AA+++A G LDTR+++ D DL+ LA SFN MAT+LE+RIERDARFAS+VSHELRSPLMTLSASVEV++ R+ +PER + AL LL DV RF LVEDLLEISRFD G L E L V EFVR+AV S+ P+A V ATP ++I D+RRL +VIANLI N
Sbjct: 212 PVGVAAQAAKAIAGGRLDTRLELTEDPDLSVLANSFNDMATALEERIERDARFASDVSHELRSPLMTLSASVEVMDARRDELPERARAALDLLKSDVVRFQGLVEDLLEISRFDAGAVRLHLEELLVAEFVRQAVRISSVPDAPVDATPRSEQVLINGDRRRLARVIANLIDN 384
BLAST of mRNA_M-pyrifera_M_contig122592.4652.1 vs. uniprot
Match: A0A7K2E820_9ACTN (Histidine kinase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2E820_9ACTN) HSP 1 Score: 185 bits (469), Expect = 9.210e-55 Identity = 103/178 (57.87%), Postives = 131/178 (73.60%), Query Frame = 1
Query: 1 LSPVGDVRRAAESLAAGELDTRVDMPADHDLASLATSFNGMATSLEDRIERDARFASEVSHELRSPLMTLSASVEVINNSREAMPERTQQALTLLNDDVQRFTQLVEDLLEISRFDVGTASLQPEPLGVVEFVRRAVEHSARPEALVT---ATPEVIDLVIAADKRRLGQVIANLIQN 525
L+P+ VR AAE+LAAG LDTR+ P D DLASL SFN MA +LE+RI RDARFASEVSHELRSPLMTL+ASVEV+ N + + ER + AL LL+DD+ RF +LVEDLLEI+R+DVGTA L+ E + +VEFV+ A+ V A P + V+ ADKRRLG+V++NL++N
Sbjct: 46 LNPLVKVRTAAEALAAGALDTRLTPPDDADLASLTASFNEMARALEERIARDARFASEVSHELRSPLMTLTASVEVLYNMADELGERGRTALDLLSDDISRFRRLVEDLLEINRYDVGTADLEAEEVHIVEFVQHAIFQFGLDSTAVVDFEAAPGMETTVLLADKRRLGRVVSNLVEN 223
BLAST of mRNA_M-pyrifera_M_contig122592.4652.1 vs. uniprot
Match: A0A6I3C0Z6_9ACTN (Histidine kinase n=4 Tax=root TaxID=1 RepID=A0A6I3C0Z6_9ACTN) HSP 1 Score: 187 bits (476), Expect = 2.150e-54 Identity = 102/175 (58.29%), Postives = 129/175 (73.71%), Query Frame = 1
Query: 1 LSPVGDVRRAAESLAAGELDTRVDMPADHDLASLATSFNGMATSLEDRIERDARFASEVSHELRSPLMTLSASVEVINNSREAMPERTQQALTLLNDDVQRFTQLVEDLLEISRFDVGTASLQPEPLGVVEFVRRAVEHSARPEALVTATPEVIDLVIAADKRRLGQVIANLIQN 525
L P+ + AAE++A G+L TR+ PAD DLASLA SFN MA +L++RIERDARFASEVSHELRSPLMTL+ASVEV+ R+ +PER Q A+ LL+ D++RF QLVEDLLEISRFDVGTA L + + +VEFVR+A ++ VT P ++ I DKRRL +V+ NLI N
Sbjct: 190 LRPLAEASAAAEAIANGKLGTRMVAPADRDLASLAASFNEMAGALQERIERDARFASEVSHELRSPLMTLTASVEVLETRRDELPERAQTAVDLLSSDLERFKQLVEDLLEISRFDVGTARLNLDEINLVEFVRQATLRASDRGIPVTYDPTMVHTYIRIDKRRLARVVQNLIDN 364 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122592.4652.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig122592.4652.1 >prot_M-pyrifera_M_contig122592.4652.1 ID=prot_M-pyrifera_M_contig122592.4652.1|Name=mRNA_M-pyrifera_M_contig122592.4652.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=175bp LSPVGDVRRAAESLAAGELDTRVDMPADHDLASLATSFNGMATSLEDRIEback to top mRNA from alignment at M-pyrifera_M_contig122592:3..527- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig122592.4652.1 ID=mRNA_M-pyrifera_M_contig122592.4652.1|Name=mRNA_M-pyrifera_M_contig122592.4652.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=525bp|location=Sequence derived from alignment at M-pyrifera_M_contig122592:3..527- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig122592:3..527- >mRNA_M-pyrifera_M_contig122592.4652.1 ID=mRNA_M-pyrifera_M_contig122592.4652.1|Name=mRNA_M-pyrifera_M_contig122592.4652.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1050bp|location=Sequence derived from alignment at M-pyrifera_M_contig122592:3..527- (Macrocystis pyrifera P11B4 male)back to top |