mRNA_M-pyrifera_M_contig122159.4563.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig122159.4563.1 vs. uniprot
Match: UPI0014022AC5 (uncharacterized protein LOC116970282 n=1 Tax=Amblyraja radiata TaxID=386614 RepID=UPI0014022AC5) HSP 1 Score: 58.2 bits (139), Expect = 6.880e-8 Identity = 32/83 (38.55%), Postives = 48/83 (57.83%), Query Frame = 1
Query: 25 IKLWDAAL------NEEVRHIDGHGDRVNACRFLTENLLVTASHDRTARVWDVRVNGGKRRADVAMFHCKAPVSALAVSPANS 255
I+ WD + ++ + H H DRV A T++++VTASHD++ R+WD R V F C+APV +LA+SPA+S
Sbjct: 265 IRPWDGSNMMIREDSDNITHKQVHSDRVTAV-VATDDIIVTASHDQSVRLWDRRT-----LRQVGFFQCRAPVLSLALSPASS 341
BLAST of mRNA_M-pyrifera_M_contig122159.4563.1 vs. uniprot
Match: A0A1V9Z5H9_9STRA (LisH domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z5H9_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 1.870e-7 Identity = 27/79 (34.18%), Postives = 46/79 (58.23%), Query Frame = 1
Query: 13 YDGAI-KLWDAALNEEVRHIDGHGDRVNACRFLTENLLVTASHDRTARVWDVRVNGGKRRADVAMFHCKAPVSALAVSP 246
YD AI +LWD + H+ GH +N+ ++ T +L+++AS DRT R+WDVR ++ + +P ++A+SP
Sbjct: 599 YDDAIVRLWDLETSTVSSHLPGHSSELNSVQYQTPHLILSASQDRTVRLWDVRSGCCEK-----LLKLHSPAQSIAISP 672
BLAST of mRNA_M-pyrifera_M_contig122159.4563.1 vs. uniprot
Match: A0A196SFH0_BLAHN (Notchless family protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SFH0_BLAHN) HSP 1 Score: 54.7 bits (130), Expect = 1.180e-6 Identity = 23/53 (43.40%), Postives = 31/53 (58.49%), Query Frame = 1
Query: 1 ASVSYDGAIKLWDAALNEEVRHIDGHGDRVNACRFLTENLLVTASHDRTARVW 159
AS S DG + +W+ + I GH D + C++ ENL+ TAS DRT RVW
Sbjct: 226 ASSSRDGTVVVWNVNTRRKEMTISGHSDSIECCKWGGENLIYTASRDRTIRVW 278
BLAST of mRNA_M-pyrifera_M_contig122159.4563.1 vs. uniprot
Match: UPI0007B882D0 (telomerase protein component 1-like n=2 Tax=Sinocyclocheilus TaxID=75365 RepID=UPI0007B882D0) HSP 1 Score: 51.6 bits (122), Expect = 1.350e-6 Identity = 26/61 (42.62%), Postives = 38/61 (62.30%), Query Frame = 1
Query: 76 HGDRVNACRFLTENLLVTASHDRTARVWDVRVNGGKRRADVAMFHCKAPVSALAVSPANSR 258
H D+V+ + LTE+L+++ASHDRT ++WD R + V MF C PV L V+P N +
Sbjct: 19 HTDKVSVLQ-LTESLIISASHDRTVKLWDRRT-----KKQVGMFVCGGPVKVLEVNPCNPK 73
BLAST of mRNA_M-pyrifera_M_contig122159.4563.1 vs. uniprot
Match: UPI000CE1E1CB (ribosome biogenesis protein ytm1-like n=1 Tax=Quercus suber TaxID=58331 RepID=UPI000CE1E1CB) HSP 1 Score: 53.9 bits (128), Expect = 2.200e-6 Identity = 31/88 (35.23%), Postives = 48/88 (54.55%), Query Frame = 1
Query: 4 SVSYDGAIKLWDAALNEEVRHIDGHGDRVNACRFLTENLLVTASHDRTARVW--DVRVNGGKRRADVAMFHCKAPVSALAVSPANSRI 261
S SYDG +++W+ + +E + GH V RFL+ +V+AS DRT R+W D + + +F K+ V +LAV +SRI
Sbjct: 145 SGSYDGQLRVWNMS-SEVMATGSGHAGAVKTARFLSPTQVVSASMDRTLRIWKYDDTLGAASLTPSIELFGHKSSVDSLAVHTPSSRI 231
BLAST of mRNA_M-pyrifera_M_contig122159.4563.1 vs. uniprot
Match: A0A5C6DL35_9BACT (Non-specific serine/threonine protein kinase n=1 Tax=Novipirellula aureliae TaxID=2527966 RepID=A0A5C6DL35_9BACT) HSP 1 Score: 53.9 bits (128), Expect = 2.350e-6 Identity = 22/48 (45.83%), Postives = 30/48 (62.50%), Query Frame = 1
Query: 19 GAIKLWDAALNEEVRHIDGHGDRVNACRFLTENLLVTASHDRTARVWD 162
G I++WDAAL + + GH + + RF LV+ASHDRT R+WD
Sbjct: 886 GEIQIWDAALTRLKQTLHGHSGAITSLRFADRYRLVSASHDRTIRIWD 933
BLAST of mRNA_M-pyrifera_M_contig122159.4563.1 vs. uniprot
Match: A0A423WZH5_9PEZI (Nuclear distribution protein PAC1 n=1 Tax=Valsa malicola TaxID=356882 RepID=A0A423WZH5_9PEZI) HSP 1 Score: 53.5 bits (127), Expect = 3.000e-6 Identity = 27/60 (45.00%), Postives = 38/60 (63.33%), Query Frame = 1
Query: 1 ASVSYDGAIKLWDAALN-EEVRHIDGHGDRVNACRFL-----TENLLVTASHDRTARVWD 162
AS S D +KLWD A + + +R + GH V+A RF+ + NLLV+AS D+T R+WD
Sbjct: 176 ASCSSDLTVKLWDPAKDYQNIRTLSGHDHSVSAVRFIPSTTSSANLLVSASRDKTLRIWD 235
BLAST of mRNA_M-pyrifera_M_contig122159.4563.1 vs. uniprot
Match: UPI0007B96437 (telomerase protein component 1-like n=2 Tax=Sinocyclocheilus TaxID=75365 RepID=UPI0007B96437) HSP 1 Score: 53.1 bits (126), Expect = 4.410e-6 Identity = 27/61 (44.26%), Postives = 38/61 (62.30%), Query Frame = 1
Query: 76 HGDRVNACRFLTENLLVTASHDRTARVWDVRVNGGKRRADVAMFHCKAPVSALAVSPANSR 258
H D+V+ R LTE+L+++ASHDRT ++WD R + V MF C PV L V+P N +
Sbjct: 2544 HTDKVSVLR-LTESLIISASHDRTVKLWDRRT-----KKQVGMFVCGGPVKVLEVNPCNPK 2598
BLAST of mRNA_M-pyrifera_M_contig122159.4563.1 vs. uniprot
Match: A0A423VKJ5_9PEZI (Nuclear distribution protein PAC1 n=1 Tax=Valsa sordida TaxID=252740 RepID=A0A423VKJ5_9PEZI) HSP 1 Score: 52.8 bits (125), Expect = 5.850e-6 Identity = 28/61 (45.90%), Postives = 37/61 (60.66%), Query Frame = 1
Query: 1 ASVSYDGAIKLWDAALN-EEVRHIDGHGDRVNACRFLTE------NLLVTASHDRTARVWD 162
AS S D +KLWD A + + +R + GH V+A RF+ NLLV+AS D+T RVWD
Sbjct: 176 ASCSSDLTVKLWDPANDYQNIRTLSGHDHSVSAVRFIPSAASSSGNLLVSASRDKTLRVWD 236
BLAST of mRNA_M-pyrifera_M_contig122159.4563.1 vs. uniprot
Match: D8SKF3_SELML (UDENN domain-containing protein n=7 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SKF3_SELML) HSP 1 Score: 52.8 bits (125), Expect = 5.910e-6 Identity = 18/53 (33.96%), Postives = 34/53 (64.15%), Query Frame = 1
Query: 16 DGAIKLWDAALNEEVRHIDGHGDRVNACRFLTENLLVTASHDRTARVWDVRVN 174
D + +WD A ++ +DGH ++++ R L+E +++ASHD T ++WD R +
Sbjct: 910 DTLVLIWDKATSQNSMKLDGHREKISCVRMLSEERVLSASHDGTVKMWDARTD 962 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122159.4563.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig122159.4563.1 >prot_M-pyrifera_M_contig122159.4563.1 ID=prot_M-pyrifera_M_contig122159.4563.1|Name=mRNA_M-pyrifera_M_contig122159.4563.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=90bp ASVSYDGAIKLWDAALNEEVRHIDGHGDRVNACRFLTENLLVTASHDRTAback to top mRNA from alignment at M-pyrifera_M_contig122159:251..520- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig122159.4563.1 ID=mRNA_M-pyrifera_M_contig122159.4563.1|Name=mRNA_M-pyrifera_M_contig122159.4563.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=270bp|location=Sequence derived from alignment at M-pyrifera_M_contig122159:251..520- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig122159:251..520- >mRNA_M-pyrifera_M_contig122159.4563.1 ID=mRNA_M-pyrifera_M_contig122159.4563.1|Name=mRNA_M-pyrifera_M_contig122159.4563.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=540bp|location=Sequence derived from alignment at M-pyrifera_M_contig122159:251..520- (Macrocystis pyrifera P11B4 male)back to top |