mRNA_M-pyrifera_M_contig122150.4562.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig122150.4562.1
Unique NamemRNA_M-pyrifera_M_contig122150.4562.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig122150.4562.1 vs. uniprot
Match: A0A7Y2IFI5_9ACTN (Histidinol dehydrogenase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2IFI5_9ACTN)

HSP 1 Score: 226 bits (576), Expect = 1.120e-69
Identity = 118/175 (67.43%), Postives = 145/175 (82.86%), Query Frame = 1
Query:    4 RVPDAELDAAVAALTPELRAAIDVSIANVTTFHEHQRRSPEVIESDGMTIKAYQRPMQRAGVYAPGGRAVYPSTVIMSAVPAKVAGVPTVVLCVPPNRDAGGVHPTVLAAARLSGVDEVYAVGGAQAIAAMAYGTETIAPVDVIAGPGNIYVALAKREVAGDVGIAAAFAGPSEV 528
            RV   E+ +A+A ++P+L+AAI+V++ NV  FHEHQ R   V+E+ GMT++A+Q+P++RAG+Y PGGRA YPSTV+M+A+PA VAGV  + LCVPPNR    V P VLAAA LSGV E+YAVGGAQAIAAMAYGTETI  VDVIAGPGN+YVALAK++VAG VGIAAAFAGPSEV
Sbjct:   63 RVSSDEIASALAGVSPQLKAAIEVAVTNVRRFHEHQLRPEAVVENSGMTVRAFQKPVRRAGLYVPGGRAAYPSTVVMTAIPALVAGVAEIALCVPPNRTTQKVAPEVLAAAALSGVTEIYAVGGAQAIAAMAYGTETIPAVDVIAGPGNVYVALAKQQVAGHVGIAAAFAGPSEV 237          
BLAST of mRNA_M-pyrifera_M_contig122150.4562.1 vs. uniprot
Match: A0A8F4J6G5_9ACTN (Histidinol dehydrogenase n=1 Tax=Aquihabitans sp. G128 TaxID=2849779 RepID=A0A8F4J6G5_9ACTN)

HSP 1 Score: 201 bits (512), Expect = 2.830e-61
Identity = 106/176 (60.23%), Postives = 137/176 (77.84%), Query Frame = 1
Query:    1 VRVPDAELDAAVAALTPELRAAIDVSIANVTTFHEHQRRSPEVIESDGMTIKAYQRPMQRAGVYAPGGRAVYPSTVIMSAVPAKVAGVPTVVLCVPPNRDAGGVHPTVLAAARLSGVDEVYAVGGAQAIAAMAYGTETIAPVDVIAGPGNIYVALAKREVAGDVGIAAAFAGPSEV 528
            +RVP   + AA+ A+ PELR A++V+ A +  FH+HQ  +    E DG+T+   + P+ RAG Y PGGRA+YPSTV+M+AVPAKVAGVP VVLCVPP++D     PT LAAA ++GVDEVYA+GGAQA+ AMAYGTE++ PVDVI GPGN++VALAKR+VAG VG+ ++F GPSEV
Sbjct:   62 LRVPPDAITAALDAIDPELRTALEVAAAGIRDFHQHQVVAEHTYERDGITVVGRKVPVDRAGCYVPGGRAIYPSTVLMTAVPAKVAGVPEVVLCVPPDKDGNVPLPT-LAAAAIAGVDEVYAIGGAQAVGAMAYGTESVRPVDVIVGPGNVFVALAKRQVAGLVGVPSSFPGPSEV 236          
BLAST of mRNA_M-pyrifera_M_contig122150.4562.1 vs. uniprot
Match: A0A431IF22_9ACTN (Histidinol dehydrogenase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A431IF22_9ACTN)

HSP 1 Score: 204 bits (519), Expect = 6.360e-61
Identity = 107/176 (60.80%), Postives = 138/176 (78.41%), Query Frame = 1
Query:    1 VRVPDAELDAAVAALTPELRAAIDVSIANVTTFHEHQRRSPEVIESDGMTIKAYQRPMQRAGVYAPGGRAVYPSTVIMSAVPAKVAGVPTVVLCVPPNRDAGGVHPTVLAAARLSGVDEVYAVGGAQAIAAMAYGTETIAPVDVIAGPGNIYVALAKREVAGDVGIAAAFAGPSEV 528
            VRVP  ++DAA+AA   ++RAA++++   +   HE Q R+  V ++DG+ I+++ RP+ R G Y PGGRA YPST++M+AVPA+VAGVP V +CVPP+RD G V P  LAAA ++GVDEVYA+GGAQAI A+AYGTE +  VDVI GPGN YVALAK+EVAG VG+AAAFAGPSEV
Sbjct:   73 VRVPAEDIDAALAATPDDVRAALELARDRIRAHHETQLRAEVVHDTDGVHIRSFHRPVDRVGCYVPGGRAAYPSTLLMTAVPAQVAGVPEVAVCVPPDRDTGRVTPVTLAAAAVAGVDEVYAIGGAQAIGALAYGTEQVPAVDVICGPGNKYVALAKQEVAGTVGVAAAFAGPSEV 248          
BLAST of mRNA_M-pyrifera_M_contig122150.4562.1 vs. uniprot
Match: A0A5Q2RKR3_9ACTN (Histidinol dehydrogenase n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RKR3_9ACTN)

HSP 1 Score: 201 bits (512), Expect = 4.170e-60
Identity = 107/176 (60.80%), Postives = 132/176 (75.00%), Query Frame = 1
Query:    1 VRVPDAELDAAVAALTPELRAAIDVSIANVTTFHEHQRRSPEVIESDGMTIKAYQRPMQRAGVYAPGGRAVYPSTVIMSAVPAKVAGVPTVVLCVPPNRDAGGVHPTVLAAARLSGVDEVYAVGGAQAIAAMAYGTETIAPVDVIAGPGNIYVALAKREVAGDVGIAAAFAGPSEV 528
            +RVP  EL AA+  + P++R A++++   +  FHE Q R    +  DG+ ++A  RP+ RAG+Y PGGRA YPSTV+M+A+PA VAGV  V L VPPNRD G V    LAAA ++GVDEVY +GGAQAI A+AYGT TI PVDVIAGPGN+YVA+AKREVA  VGIAAAFAGPSEV
Sbjct:   63 LRVPVEELHAALHRIDPDVRRALEIAAERIRAFHETQVRPDHELRRDGLVVEALVRPVDRAGIYVPGGRAAYPSTVLMAAIPALVAGVEQVALVVPPNRDTGRVADVTLAAAAIAGVDEVYGIGGAQAIGALAYGTATIRPVDVIAGPGNVYVAVAKREVADHVGIAAAFAGPSEV 238          
BLAST of mRNA_M-pyrifera_M_contig122150.4562.1 vs. uniprot
Match: UPI001F255907 (histidinol dehydrogenase n=1 Tax=Rhabdothermincola sediminis TaxID=2751370 RepID=UPI001F255907)

HSP 1 Score: 199 bits (505), Expect = 4.970e-59
Identity = 105/176 (59.66%), Postives = 134/176 (76.14%), Query Frame = 1
Query:    1 VRVPDAELDAAVAALTPELRAAIDVSIANVTTFHEHQRRSPEVIESDGMTIKAYQRPMQRAGVYAPGGRAVYPSTVIMSAVPAKVAGVPTVVLCVPPNRDAGGVHPTVLAAARLSGVDEVYAVGGAQAIAAMAYGTETIAPVDVIAGPGNIYVALAKREVAGDVGIAAAFAGPSEV 528
            +RVP  EL+ A+ A+   +R AI  +   +  FH+ QR    + E DG+ ++    P+ RAG+Y PGGR  YPSTV+M+AVPA+VAGVP +VLCVPP+R+ G V    LAAA L+GV+EVYAVGGAQA+AAMAYGTE+I PVDVIAGPGN+YVALAK+EVAG VG+ +AFAGPSE+
Sbjct:   60 LRVPARELERALGAIPDPVREAIAAAHDAIRDFHQAQRHPERIYERDGIVVRERAVPVDRAGLYVPGGRGAYPSTVLMTAVPARVAGVPELVLCVPPDRERGAVAEVTLAAAALAGVEEVYAVGGAQAVAAMAYGTESIRPVDVIAGPGNVYVALAKQEVAGIVGVPSAFAGPSEI 235          
BLAST of mRNA_M-pyrifera_M_contig122150.4562.1 vs. uniprot
Match: A0A6I3F3H1_9ACTN (Histidinol dehydrogenase n=2 Tax=root TaxID=1 RepID=A0A6I3F3H1_9ACTN)

HSP 1 Score: 199 bits (505), Expect = 1.160e-58
Identity = 109/175 (62.29%), Postives = 132/175 (75.43%), Query Frame = 1
Query:    4 RVPDAELDAAVAALTPELRAAIDVSIANVTTFHEHQRRSPEVIESDGMTIKAYQRPMQRAGVYAPGGRAVYPSTVIMSAVPAKVAGVPTVVLCVPPNRDAGGVHPTVLAAARLSGVDEVYAVGGAQAIAAMAYGTETIAPVDVIAGPGNIYVALAKREVAGDVGIAAAFAGPSEV 528
            RV  AE+DAA+A     L AA+  +  +V  FHE QRRS      DG+T++    P+ RAG Y PGGR  YPS+V+M+AVPA+VAGVP VVLC PP+R+ G +    LAAA L+GVDEVYAVGGAQAIAAMAYGTE++A VDVIAGPGN++VALAKREVAG VG+  AFAGPSE+
Sbjct:  101 RVSQAEIDAALADAPAALVAALTAARDSVRAFHETQRRSDHSFTRDGITVRGRSVPVDRAGCYVPGGRGSYPSSVLMTAVPARVAGVPEVVLCTPPDRETGRIATATLAAAALAGVDEVYAVGGAQAIAAMAYGTESLAAVDVIAGPGNVFVALAKREVAGLVGVPMAFAGPSEI 275          
BLAST of mRNA_M-pyrifera_M_contig122150.4562.1 vs. uniprot
Match: UPI001D1124E2 (histidinol dehydrogenase n=1 Tax=Aquihabitans sp. Kera 3 TaxID=2884263 RepID=UPI001D1124E2)

HSP 1 Score: 198 bits (503), Expect = 1.160e-58
Identity = 102/176 (57.95%), Postives = 137/176 (77.84%), Query Frame = 1
Query:    1 VRVPDAELDAAVAALTPELRAAIDVSIANVTTFHEHQRRSPEVIESDGMTIKAYQRPMQRAGVYAPGGRAVYPSTVIMSAVPAKVAGVPTVVLCVPPNRDAGGVHPTVLAAARLSGVDEVYAVGGAQAIAAMAYGTETIAPVDVIAGPGNIYVALAKREVAGDVGIAAAFAGPSEV 528
            +RVP   ++AA+AA  P++RAA++++   + + HE Q R     ++DG+ I+++ RP+ R G Y PGGRA YPST++M+AVPA+VAGVP V +CVPP+R+ G V P  LAAA ++G+DEVYA+GGAQAI A+A+GTE +  VDVI GPGN YVALAK+EVAG VG+AAAFAGPSEV
Sbjct:   61 LRVPADRIEAALAATPPDVRAALELARDRIRSHHETQLRPEVAHDTDGVHIRSFHRPVDRVGCYVPGGRAAYPSTLLMTAVPAQVAGVPEVAVCVPPDRETGEVTPVTLAAAAVAGIDEVYAIGGAQAIGALAFGTEQVPAVDVICGPGNKYVALAKQEVAGTVGVAAAFAGPSEV 236          
BLAST of mRNA_M-pyrifera_M_contig122150.4562.1 vs. uniprot
Match: A0A7Y2GM86_9ACTN (Histidinol dehydrogenase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2GM86_9ACTN)

HSP 1 Score: 197 bits (501), Expect = 1.740e-58
Identity = 110/177 (62.15%), Postives = 140/177 (79.10%), Query Frame = 1
Query:    1 VRVPDAELDAAVAALTPELRAAIDVSIANVTTFHEHQRRSPEVIESDGMTIKAYQRPMQRAGVYAPGGRAVYPSTVIMSAVPAKVAGVPTVVLCVPPNRDAGGVHPTV-LAAARLSGVDEVYAVGGAQAIAAMAYGTETIAPVDVIAGPGNIYVALAKREVAGDVGIAAAFAGPSEV 528
            +RVP   L AA+ A   ++R A++++  NV  +H HQR + +  E+DG+ +++  RP++RAG Y PGGRA+YPSTV+M+AVPA+VAGV  VVLCVPP  D  G+ P V +AAA ++ VDEVYAVGGAQAIAAMAYGTETIAPVDVI GPGNIYVA+AKREVAG VG+ ++FAGPSEV
Sbjct:   62 LRVPTEALRAALDATPADVRDALELAHHNVAEYHRHQRPADQRYEADGIVVRSLFRPVERAGCYVPGGRALYPSTVLMTAVPARVAGVDQVVLCVPPGPD--GLPPEVTMAAAAVAEVDEVYAVGGAQAIAAMAYGTETIAPVDVIVGPGNIYVAIAKREVAGVVGVPSSFAGPSEV 236          
BLAST of mRNA_M-pyrifera_M_contig122150.4562.1 vs. uniprot
Match: A0A2E4XK48_9ACTN (Histidinol dehydrogenase (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E4XK48_9ACTN)

HSP 1 Score: 191 bits (486), Expect = 3.030e-58
Identity = 101/174 (58.05%), Postives = 138/174 (79.31%), Query Frame = 1
Query:    7 VPDAELDAAVAALTPELRAAIDVSIANVTTFHEHQRRSPEVIESDGMTIKAYQRPMQRAGVYAPGGRAVYPSTVIMSAVPAKVAGVPTVVLCVPPNRDAGGVHPTVLAAARLSGVDEVYAVGGAQAIAAMAYGTETIAPVDVIAGPGNIYVALAKREVAGDVGIAAAFAGPSEV 528
            + +  +++A  ++T ELR A++ + + + +FH+ Q R  E  ++ G+TI+  Q+P++RAG Y PGGRA YPST++M+A+PAKVAGV  VV+CVPP+  +G V+   LAAA+++GV  VYAVGGAQAIAAMAYGTETI PVDVI GPGNIYVA A+R+V+GDVGIA+AFAGPSE+
Sbjct:   65 ISETAIESAWESITTELRKALEDAGSRIRSFHQSQVRDSETTQNGGITIETKQQPVRRAGCYVPGGRAAYPSTLLMTAIPAKVAGVEEVVVCVPPDA-SGSVNIATLAAAKVAGVSSVYAVGGAQAIAAMAYGTETIRPVDVIVGPGNIYVATAQRQVSGDVGIASAFAGPSEI 237          
BLAST of mRNA_M-pyrifera_M_contig122150.4562.1 vs. uniprot
Match: A0A6N7FHB8_9ACTN (Histidinol dehydrogenase (Fragment) n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6N7FHB8_9ACTN)

HSP 1 Score: 196 bits (497), Expect = 3.670e-58
Identity = 108/178 (60.67%), Postives = 137/178 (76.97%), Query Frame = 1
Query:    1 VRVPDAELDAAVAALTPELRAAIDVSIANVTTFHEHQRRSPEVIESDGMTIKAYQRPMQRAGVYAPGGRAVYPSTVIMSAVPAKVAGVPTVVLCVPPNRDAGGVHPTVLAAARLSGVDEVYAVGGAQAIAAMAYGTETIAPVDVIAGPGNIYVALAKREVAGD--VGIAAAFAGPSEV 528
            +RVP   + AA+ A+ P LRAA++ + AN+  FH+ Q  +P V E +G+ + +Y+ P+ RAG+Y PGGRAVYPSTV+M+AVPA+VAGV  V LCVPP++  GGV    LAAA ++GVDEVYAVGGAQAIAA+A+GTE+I  VDVI GPGN YVA+AKREVAG   V I +AFAGPSEV
Sbjct:   33 LRVPPPAIAAALEAVEPALRAALEEAAANIGAFHQGQLHAPHVHERNGVRVLSYRVPVDRAGLYVPGGRAVYPSTVLMTAVPARVAGVGEVALCVPPDKSTGGVPLATLAAAAVAGVDEVYAVGGAQAIAALAFGTESIGAVDVIVGPGNAYVAVAKREVAGRGRVAIPSAFAGPSEV 210          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122150.4562.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Y2IFI5_9ACTN1.120e-6967.43Histidinol dehydrogenase n=1 Tax=Acidimicrobiales ... [more]
A0A8F4J6G5_9ACTN2.830e-6160.23Histidinol dehydrogenase n=1 Tax=Aquihabitans sp. ... [more]
A0A431IF22_9ACTN6.360e-6160.80Histidinol dehydrogenase n=1 Tax=Acidimicrobiia ba... [more]
A0A5Q2RKR3_9ACTN4.170e-6060.80Histidinol dehydrogenase n=1 Tax=Actinomarinicola ... [more]
UPI001F2559074.970e-5959.66histidinol dehydrogenase n=1 Tax=Rhabdothermincola... [more]
A0A6I3F3H1_9ACTN1.160e-5862.29Histidinol dehydrogenase n=2 Tax=root TaxID=1 RepI... [more]
UPI001D1124E21.160e-5857.95histidinol dehydrogenase n=1 Tax=Aquihabitans sp. ... [more]
A0A7Y2GM86_9ACTN1.740e-5862.15Histidinol dehydrogenase n=1 Tax=Acidimicrobiales ... [more]
A0A2E4XK48_9ACTN3.030e-5858.05Histidinol dehydrogenase (Fragment) n=1 Tax=Acidim... [more]
A0A6N7FHB8_9ACTN3.670e-5860.67Histidinol dehydrogenase (Fragment) n=1 Tax=Acidim... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig122150contigM-pyrifera_M_contig122150:3..530 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score192.2
Seed ortholog evalue2.1e-46
Seed eggNOG ortholog1229780.BN381_80362
Preferred namehisD
KEGG rclassRC00099,RC00242,RC00463
KEGG koko:K00013,ko:K15509
KEGG ReactionR01158,R01163,R03012
KEGG Pathwayko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230
KEGG ModuleM00026
Hectar predicted targeting categoryother localisation
GOsGO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0030312,GO:0034641,GO:0040007,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
EggNOG free text desc.Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
EggNOG OGs2GKKA@201174,3UWFF@52018,COG0141@1,COG0141@2
EC1.1.1.23,1.1.1.308
COG Functional cat.E
BiGG ReactioniNJ661.Rv1599
Best tax levelunclassified Actinobacteria (class)
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size528
Cds size528
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815741.3963995-CDS-M-pyrifera_M_contig122150:2..5301622815741.3963995-CDS-M-pyrifera_M_contig122150:2..530Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig122150 3..530 +
1692277547.7079668-CDS-M-pyrifera_M_contig122150:2..5301692277547.7079668-CDS-M-pyrifera_M_contig122150:2..530Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig122150 3..530 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig122150.4562.1prot_M-pyrifera_M_contig122150.4562.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig122150 3..530 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig122150.4562.1

>prot_M-pyrifera_M_contig122150.4562.1 ID=prot_M-pyrifera_M_contig122150.4562.1|Name=mRNA_M-pyrifera_M_contig122150.4562.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=176bp
VRVPDAELDAAVAALTPELRAAIDVSIANVTTFHEHQRRSPEVIESDGMT
IKAYQRPMQRAGVYAPGGRAVYPSTVIMSAVPAKVAGVPTVVLCVPPNRD
AGGVHPTVLAAARLSGVDEVYAVGGAQAIAAMAYGTETIAPVDVIAGPGN
IYVALAKREVAGDVGIAAAFAGPSEV
back to top

mRNA from alignment at M-pyrifera_M_contig122150:3..530+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig122150.4562.1 ID=mRNA_M-pyrifera_M_contig122150.4562.1|Name=mRNA_M-pyrifera_M_contig122150.4562.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=528bp|location=Sequence derived from alignment at M-pyrifera_M_contig122150:3..530+ (Macrocystis pyrifera P11B4 male)
GTCCGAGTGCCAGACGCCGAACTCGACGCTGCGGTGGCTGCGCTCACCCC CGAGCTGCGAGCCGCGATCGACGTCTCGATCGCCAACGTCACGACCTTCC ACGAACACCAGCGTCGTTCACCCGAGGTCATCGAGTCCGACGGCATGACC ATCAAGGCCTACCAGCGGCCGATGCAGCGAGCCGGTGTCTACGCTCCGGG CGGTCGAGCGGTGTATCCGTCCACCGTGATCATGAGCGCCGTGCCGGCGA AGGTCGCCGGCGTGCCCACGGTCGTCCTGTGTGTTCCGCCGAACCGAGAC GCCGGTGGTGTCCACCCGACGGTGCTGGCAGCCGCACGGCTCAGTGGCGT CGACGAGGTCTACGCCGTCGGAGGCGCCCAGGCCATCGCGGCGATGGCGT ACGGCACCGAGACGATCGCACCGGTCGACGTCATCGCCGGACCCGGCAAC ATCTACGTGGCGCTGGCCAAGCGTGAGGTCGCCGGCGACGTCGGTATCGC CGCGGCGTTTGCCGGCCCGTCCGAGGTC
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig122150:3..530+

>mRNA_M-pyrifera_M_contig122150.4562.1 ID=mRNA_M-pyrifera_M_contig122150.4562.1|Name=mRNA_M-pyrifera_M_contig122150.4562.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1056bp|location=Sequence derived from alignment at M-pyrifera_M_contig122150:3..530+ (Macrocystis pyrifera P11B4 male)
GTCCGAGTGCCAGACGCCGAACTCGACGCTGCGGTGGCTGCGCTCACCCC
CGAGCTGCGAGCCGCGATCGACGTCTCGATCGCCAACGTCACGACCTTCC
ACGAACACCAGCGTCGTTCACCCGAGGTCATCGAGTCCGACGGCATGACC
ATCAAGGCCTACCAGCGGCCGATGCAGCGAGCCGGTGTCTACGCTCCGGG
CGGTCGAGCGGTGTATCCGTCCACCGTGATCATGAGCGCCGTGCCGGCGA
AGGTCGCCGGCGTGCCCACGGTCGTCCTGTGTGTTCCGCCGAACCGAGAC
GCCGGTGGTGTCCACCCGACGGTGCTGGCAGCCGCACGGCTCAGTGGCGT
CGACGAGGTCTACGCCGTCGGAGGCGCCCAGGCCATCGCGGCGATGGCGT
ACGGCACCGAGACGATCGCACCGGTCGACGTCATCGCCGGACCCGGCAAC
ATCTACGTGGCGCTGGCCAAGCGTGAGGTCGCCGGCGACGTCGGTATCGC
CGCGGCGTTTGCCGGCCCGTCCGAGGTCGTCCGAGTGCCAGACGCCGAAC
TCGACGCTGCGGTGGCTGCGCTCACCCCCGAGCTGCGAGCCGCGATCGAC
GTCTCGATCGCCAACGTCACGACCTTCCACGAACACCAGCGTCGTTCACC
CGAGGTCATCGAGTCCGACGGCATGACCATCAAGGCCTACCAGCGGCCGA
TGCAGCGAGCCGGTGTCTACGCTCCGGGCGGTCGAGCGGTGTATCCGTCC
ACCGTGATCATGAGCGCCGTGCCGGCGAAGGTCGCCGGCGTGCCCACGGT
CGTCCTGTGTGTTCCGCCGAACCGAGACGCCGGTGGTGTCCACCCGACGG
TGCTGGCAGCCGCACGGCTCAGTGGCGTCGACGAGGTCTACGCCGTCGGA
GGCGCCCAGGCCATCGCGGCGATGGCGTACGGCACCGAGACGATCGCACC
GGTCGACGTCATCGCCGGACCCGGCAACATCTACGTGGCGCTGGCCAAGC
GTGAGGTCGCCGGCGACGTCGGTATCGCCGCGGCGTTTGCCGGCCCGTCC
GAGGTC
back to top