mRNA_M-pyrifera_M_contig122141.4558.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig122141.4558.1 vs. uniprot
Match: R1DKR6_EMIHU (Uncharacterized protein n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DKR6_EMIHU) HSP 1 Score: 110 bits (274), Expect = 1.710e-28 Identity = 55/103 (53.40%), Postives = 67/103 (65.05%), Query Frame = 1
Query: 34 ALLTDGGELSALCNAALEEVFCRFDVDGDGVFSDSELDEFAKACNGGKAFSKEEKQELASAFLVDAEGRLTKLGFLQMFHLQTSAEPSETWQDLKALGYDNGL 342
ALL D L+ AAL EVFCRFD D DG +S +EL FA+ CNGG F + E ++ F D GRLT+ GFL+M HLQT A P +TW DL+ALGYD+ L
Sbjct: 7 ALLDDDDWLAPPLEAALGEVFCRFDADADGAWSTAELQSFARTCNGGDEFGEAELSQVGE-FTTDGHGRLTRRGFLEMMHLQTMARPEDTWADLRALGYDSSL 108
BLAST of mRNA_M-pyrifera_M_contig122141.4558.1 vs. uniprot
Match: A0A0M0K2V2_9EUKA (Small nuclear ribonucleoprotein splicing factor n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K2V2_9EUKA) HSP 1 Score: 114 bits (285), Expect = 8.250e-28 Identity = 57/112 (50.89%), Postives = 70/112 (62.50%), Query Frame = 1
Query: 10 KGKQIAKEALLTDGGELSALCNAALEEVFCRFDVDGDGVFSDSELDEFAKACNGGKAFSKEEKQELASAFLVDAEGRLTKLGFLQMFHLQTSAEPSETWQDLKALGYDNGLQ 345
K K + L DGG+LS ALE VF RFD D DG S++EL FA+ACNGG+ F EE E+ F G LT+ GFLQM+H QT A P +TW DLKALG++N L+
Sbjct: 12 KVKSKTPKVALLDGGDLSHALQGALESVFARFDADHDGALSETELQAFARACNGGETFEDEELDEIRQFFDTTPHGCLTRKGFLQMYHTQTLARPHDTWSDLKALGFNNNLE 123
BLAST of mRNA_M-pyrifera_M_contig122141.4558.1 vs. uniprot
Match: R1FE02_EMIHU (Uncharacterized protein (Fragment) n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FE02_EMIHU) HSP 1 Score: 99.0 bits (245), Expect = 9.740e-25 Identity = 47/86 (54.65%), Postives = 60/86 (69.77%), Query Frame = 1
Query: 76 AALEEVFCRFDVDGDGVFSDSELDEFAKACNGGKAFSKEEKQELASAFLVDAEGRLTKLGFLQMFHLQTSAEPSETWQDLKALGYD 333
AAL EVFCRFD D DG +S +EL FA+ CNGG+ F + E ++ F + +GRLT+ GFL+M LQT A P +TW DL+ALGYD
Sbjct: 2 AALGEVFCRFDADVDGAWSTAELQSFARTCNGGEEFGEAELSQVGE-FTTNGQGRLTRRGFLEMMQLQTMARPEDTWADLRALGYD 86
BLAST of mRNA_M-pyrifera_M_contig122141.4558.1 vs. uniprot
Match: A0A197JK86_9FUNG (EF-hand domain-containing protein n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JK86_9FUNG) HSP 1 Score: 99.4 bits (246), Expect = 2.120e-24 Identity = 51/110 (46.36%), Postives = 71/110 (64.55%), Query Frame = 1
Query: 37 LLTDGGELSALCNAALEEVFCRFDVDGDGVFSDSELDEFAKACNGGKAFSKEEKQELASAFLVDAEGRLTKLGFLQMFHLQTSAEPSETWQDLKALGYDNGLQLTTSAEE 366
L + G L+ C AL +F R+DVD DG S++ELD FAK NG F + ++E+ +D++G+LT GFLQM++LQTS+EP ETW+DL+ GYD L+L S E
Sbjct: 9 LTEEDGALTKACEDALVAIFERYDVDKDGALSNAELDAFAKDTNGD-VFDEVAREEITEFLDLDSKGQLTLKGFLQMYNLQTSSEPEETWKDLQKHGYDTNLKLVASRSE 117
BLAST of mRNA_M-pyrifera_M_contig122141.4558.1 vs. uniprot
Match: A0A1S8WA04_9FUNG (EF-hand domain-containing protein n=1 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8WA04_9FUNG) HSP 1 Score: 97.4 bits (241), Expect = 8.190e-24 Identity = 52/106 (49.06%), Postives = 66/106 (62.26%), Query Frame = 1
Query: 37 LLTDGGELSALCNAALEEVFCRFDVDGDGVFSDSELDEFAKACNGGKAFSKEEKQELASAFLVDAEGRLTKLGFLQMFHLQTSAEPSETWQDLKALGYDNGLQLTT 354
LL D + AL E+F RFD DGDGVFS +E+D FA A NG K F +E+ F VD+ G+LT GFL+MF +QT A+ ETW+DL+ GYD+ L L T
Sbjct: 8 LLDDEDSFTPQARQALTEIFTRFDKDGDGVFSQAEVDAFAIASNGSK-FDSSTLEEIKEYFDVDSNGQLTLQGFLEMFQMQTLADTEETWKDLEKHGYDDQLHLKT 112
BLAST of mRNA_M-pyrifera_M_contig122141.4558.1 vs. uniprot
Match: A0A7S4FB56_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FB56_CHRCT) HSP 1 Score: 100 bits (248), Expect = 1.320e-23 Identity = 47/89 (52.81%), Postives = 63/89 (70.79%), Query Frame = 1
Query: 82 LEEVFCRFDVDGDGVFSDSELDEFAKACNGGKAFSKEEKQELASAFLVDAEGRLTKLGFLQMFHLQTSAEPSETWQDLKALGYDNGLQL 348
L ++F RFD+DG+G S EL FAK CNGG+ FS++E +++ F D G LTK GF QM+H+QT+A P +TW+DLKALGY L+L
Sbjct: 51 LLQIFNRFDLDGNGRLSVDELQGFAKVCNGGEIFSQDELEQIEQCFDTDDCGGLTKRGFFQMYHMQTTARPEDTWKDLKALGYTETLEL 139
BLAST of mRNA_M-pyrifera_M_contig122141.4558.1 vs. uniprot
Match: A0A7S0LAA6_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LAA6_9EUKA) HSP 1 Score: 101 bits (251), Expect = 1.380e-23 Identity = 50/111 (45.05%), Postives = 66/111 (59.46%), Query Frame = 1
Query: 25 AKEALLTDGGELSALCNAALEEVFCRFDVDGDGVFSDSELDEFAKACNGGKAFSKEEKQELASAFLVDAEGRLTKLGFLQMFHLQTSAEPSETWQDLKALGYDNGLQLTTS 357
A A L DG LS+ A L +F RFDVD DG + E+ + + CNGG+ +E +++ F D +G LT GF QM+HLQT A P +TW DLKALGY+ LQ T+
Sbjct: 53 APAAQLLDGDFLSSELQAVLTAIFHRFDVDSDGALNAYEVQSYTRTCNGGEGLDDDELEQMRQYFDKDGDGNLTLRGFFQMYHLQTQARPVDTWNDLKALGYNKALQPVTA 163
BLAST of mRNA_M-pyrifera_M_contig122141.4558.1 vs. uniprot
Match: A0A507DZK1_9FUNG (EF-hand domain-containing protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DZK1_9FUNG) HSP 1 Score: 96.7 bits (239), Expect = 1.690e-23 Identity = 52/104 (50.00%), Postives = 62/104 (59.62%), Query Frame = 1
Query: 37 LLTDGGELSALCNAALEEVFCRFDVDGDGVFSDSELDEFAKACNGGKAFSKEEKQELASAFLVDAEGRLTKLGFLQMFHLQTSAEPSETWQDLKALGYDNGLQL 348
LLTD + + +A E+F RFD DGDG S +E+D FA A NG K F K EL S+F A G LT GFL M HLQ+ A+P ETW+DL LGY L L
Sbjct: 6 LLTDLDDFTPAAESAFREIFARFDADGDGALSPAEVDAFAVAANGEK-FDKATHAELVSSFETTAAGFLTLAGFLDMLHLQSLADPEETWKDLATLGYAEDLTL 108
BLAST of mRNA_M-pyrifera_M_contig122141.4558.1 vs. uniprot
Match: A0A1Y2GUI0_9FUNG (EF-hand domain-containing protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GUI0_9FUNG) HSP 1 Score: 94.0 bits (232), Expect = 3.640e-22 Identity = 49/110 (44.55%), Postives = 69/110 (62.73%), Query Frame = 1
Query: 37 LLTDGGELSALCNAALEEVFCRFDVDGDGVFSDSELDEFAKACNGGKAFSKEEKQELASAFLVDAEGRLTKLGFLQMFHLQTSAEPSETWQDLKALGYDNGLQLTTSAEE 366
L+ + G L+ C AL +F ++D D DG S+ ELD FAK NG F ++ + E+ +D +G+LT GFLQM++LQTS+EP ETW+DL+ GYD L+L S E
Sbjct: 9 LVDEDGALTQECEDALVAIFKKYDSDKDGALSNKELDAFAKDTNGD-VFDEDTRTEIKEFLDLDDKGQLTLKGFLQMYNLQTSSEPQETWKDLQKHGYDTKLKLVASRRE 117
BLAST of mRNA_M-pyrifera_M_contig122141.4558.1 vs. uniprot
Match: A0A4P9XQA2_9FUNG (EF-hand domain-containing protein n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XQA2_9FUNG) HSP 1 Score: 92.0 bits (227), Expect = 1.960e-21 Identity = 47/107 (43.93%), Postives = 68/107 (63.55%), Query Frame = 1
Query: 46 DGGELSALCNAALEEVFCRFDVDGDGVFSDSELDEFAKACNGGKAFSKEEKQELASAFLVDAEGRLTKLGFLQMFHLQTSAEPSETWQDLKALGYDNGLQLTTSAEE 366
D + C AAL+E+F RFD DGDG SD+EL FA A NG + F + +E+ F V G LT GF++++ LQT++EP ETW DL+ GY++ L+L ++ E+
Sbjct: 20 DDDYFTPACEAALKEIFHRFDKDGDGALSDAELAAFATATNG-EPFDEATLEEIRDNFDVTEAGALTLRGFIELYTLQTTSEPEETWNDLRKHGYNDQLELVSAKEK 125 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122141.4558.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig122141.4558.1 >prot_M-pyrifera_M_contig122141.4558.1 ID=prot_M-pyrifera_M_contig122141.4558.1|Name=mRNA_M-pyrifera_M_contig122141.4558.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=125bp MAAKGKQIAKEALLTDGGELSALCNAALEEVFCRFDVDGDGVFSDSELDEback to top mRNA from alignment at M-pyrifera_M_contig122141:98..472+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig122141.4558.1 ID=mRNA_M-pyrifera_M_contig122141.4558.1|Name=mRNA_M-pyrifera_M_contig122141.4558.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=375bp|location=Sequence derived from alignment at M-pyrifera_M_contig122141:98..472+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig122141:98..472+ >mRNA_M-pyrifera_M_contig122141.4558.1 ID=mRNA_M-pyrifera_M_contig122141.4558.1|Name=mRNA_M-pyrifera_M_contig122141.4558.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=750bp|location=Sequence derived from alignment at M-pyrifera_M_contig122141:98..472+ (Macrocystis pyrifera P11B4 male)back to top |