mRNA_M-pyrifera_M_contig12196.4511.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12196.4511.1 vs. uniprot
Match: D8LF87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF87_ECTSI) HSP 1 Score: 294 bits (753), Expect = 8.280e-89 Identity = 142/184 (77.17%), Postives = 161/184 (87.50%), Query Frame = 1
Query: 1 EEELESTPFETHDLVRGQSLGLVGGISNLKVVGKLKCVVRVTEGNPDDDPLFVDKDNFATLAQAKARNDAIMGEILKPKGYKMRLYVLQALNLTPMDIGIGGRPGKSDPYLRISLGKEVIDDRANYIDDVTDAMIYKCVELNCELPGASQLKIEVMDYDDIGRDELIGSTTIDLEDRWFDTRWQ 552
EEEL +TPFE++DL RG+ LG G S LK VGKLKC+VRVTEG+PDD+PLFVDK +F TLA+AKARND I+ E+LKPKGYK+RLY+LQALNLTPMDIGIGGRPGKSDPYL++ LGKE DD+ NYIDDVTDA YKCVE+N LPGASQL+I+VMDYDDIGRDELIG T IDLEDRWFDTRWQ
Sbjct: 1578 EEELMATPFESYDLFRGKLLGGGIGGSTLKKVGKLKCIVRVTEGDPDDEPLFVDKKSFPTLAKAKARNDIILAELLKPKGYKVRLYILQALNLTPMDIGIGGRPGKSDPYLKVKLGKESFDDKKNYIDDVTDADFYKCVEINGTLPGASQLEIDVMDYDDIGRDELIGRTVIDLEDRWFDTRWQ 1761
BLAST of mRNA_M-pyrifera_M_contig12196.4511.1 vs. uniprot
Match: A0A6H5JL55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL55_9PHAE) HSP 1 Score: 239 bits (610), Expect = 1.400e-69 Identity = 122/205 (59.51%), Postives = 141/205 (68.78%), Query Frame = 1
Query: 1 EEELESTPFETHDLVRGQSLGLVGGISNLKVVGKLKCVVRVTEGNPDDDPLFVDKDNFATLAQAKARNDAIMGEILKPKGYKMRLYVLQALNLTPMDIGIGGRPGKSDPYLRISLGKEVIDDRANYIDDVTDAMIYKCVELNCELPGASQLK---------------------IEVMDYDDIGRDELIGSTTIDLEDRWFDTRWQ 552
E EL + PFET++L RGQ G G + + VG+ KCV+RVTEG+PD+ P+F D K RN+ I+ E+L PKGYK+RLY LQALNLTPMDIGIGGRPGKSDPYL++ LGKE D NYIDDVTDA +Y CVELNCELPGASQL+ I+VMDYDDIG DELIG T IDLEDRWFD RWQ
Sbjct: 1503 ERELATKPFETYELFRGQRFGRGGDTGDYREVGRFKCVIRVTEGDPDEQPMFTPGD--------KKRNEEILNELLLPKGYKLRLYCLQALNLTPMDIGIGGRPGKSDPYLKVKLGKEEFSDVDNYIDDVTDADLYTCVELNCELPGASQLQRGLTIKVPLVCLPWLFVRVVQIDVMDYDDIGGDELIGRTVIDLEDRWFDQRWQ 1699
BLAST of mRNA_M-pyrifera_M_contig12196.4511.1 vs. uniprot
Match: D8LF91_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF91_ECTSI) HSP 1 Score: 199 bits (506), Expect = 1.330e-55 Identity = 97/129 (75.19%), Postives = 106/129 (82.17%), Query Frame = 1
Query: 166 DNFATLAQAKARNDAIMGEILKPKGYKMRLYVLQALNLTPMDIGIGGRPGKSDPYLRISLGKEVIDDRANYIDDVTDAMIYKCVELNCELPGASQLKIEVMDYDDIGRDELIGSTTIDLEDRWFDTRWQ 552
D F LAQ I+ E+L PKGYK+RLY LQALNLTPMDIGIGGRPGKSDPYL++ LGKEV D NYIDDVTDA +Y+CVELNCELPGASQL+I+VMDYDDIG DELIG T IDLEDRWFD RWQ
Sbjct: 1196 DYFFVLAQ-------ILNELLLPKGYKLRLYCLQALNLTPMDIGIGGRPGKSDPYLKVKLGKEVFSDVDNYIDDVTDADLYRCVELNCELPGASQLQIDVMDYDDIGGDELIGRTVIDLEDRWFDQRWQ 1317
BLAST of mRNA_M-pyrifera_M_contig12196.4511.1 vs. uniprot
Match: A0A6H5LEK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEK6_9PHAE) HSP 1 Score: 180 bits (456), Expect = 1.110e-51 Identity = 87/119 (73.11%), Postives = 104/119 (87.39%), Query Frame = 1
Query: 1 EEELESTPFETHDLVRGQSLGLVGGISNLKVVGKLKCVVRVTEGNPDDDPLFVDKDNFATLAQAKARNDAIMGEILKPKGYKMRLYVLQALNLTPMDIGIGGRPGKSDPYLRISLGKEV 357
EEEL +TPFE++DL RG+ LG G S LK VGKLKC+VRVTEG+PDD+PLFV+K +F TLA+AKA+ND I+ E+LKPKGYK+RLYVLQALNLT MD+GIGGRPGKSDPYL++ LGKEV
Sbjct: 291 EEELMATPFESYDLFRGKLLGGGIGGSTLKKVGKLKCIVRVTEGDPDDEPLFVNKKSFPTLAKAKAKNDIILAELLKPKGYKVRLYVLQALNLTAMDVGIGGRPGKSDPYLKVKLGKEV 409
BLAST of mRNA_M-pyrifera_M_contig12196.4511.1 vs. uniprot
Match: A0A7S3JSY6_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JSY6_9STRA) HSP 1 Score: 171 bits (434), Expect = 6.330e-46 Identity = 90/186 (48.39%), Postives = 123/186 (66.13%), Query Frame = 1
Query: 1 EEELESTPFETHDLVRGQSLGLVGGISNLKVVGKLKCVVRVTEGNPDDDPLFVDKDNFATLAQAKARNDAIMGEILKPKGYKMRLYVLQALNLTPMDIGIGGRPGKSDPYLRISLGK-EVIDDRANYIDDVTDAMIYKCVELNCELPGASQLKIEVMDYDDIG-RDELIGSTTIDLEDRWFDTRWQ 552
EE L +PFET+DL G +G + + ++ GK K +VRV +P + D ++D + +LKP+GYK+RLYV++ ++LTPMD G+ G PGKSDPYLRI LGK +V +DR NYI D D +YK +E++ ELPG SQLKI+V+DYDDIG D+LIG+T +DLEDRWF W+
Sbjct: 1391 EETLPDSPFETYDLSLGSKVGTLLRDPDWRITGKFKGIVRVFRKDPITKEVLDDD-----------QDDIDLMRLLKPQGYKIRLYVIRGVHLTPMDPGLMGAPGKSDPYLRIDLGKNQVFNDRENYIPDAVDVDLYKVIEMSTELPGDSQLKIDVVDYDDIGFSDDLIGTTIVDLEDRWFSRAWR 1565
BLAST of mRNA_M-pyrifera_M_contig12196.4511.1 vs. uniprot
Match: A0A7S3XXD1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXD1_HETAK) HSP 1 Score: 164 bits (415), Expect = 2.860e-45 Identity = 90/184 (48.91%), Postives = 116/184 (63.04%), Query Frame = 1
Query: 1 EEELESTPFETHDLVRGQSLGLVGGISNLKVVGKLKCVVRVTEGNPDDDPLFVDKDNFATLAQAKARNDAIMGEILKPKGYKMRLYVLQALNLTPMDIGIGGRPGKSDPYLRISLGKEVIDDRANYIDDVTDAMIYKCVELNCELPGASQLKIEVMDYDDIGRDELIGSTTIDLEDRWFDTRWQ 552
E ++ PFE + L R G G +VVGK K +VRV + ++ PLF + E+L+P+ YK+RLYVL+A NLTPMD+G G+ GKSDPYL LGK+ +D+ NY D+ +A +Y+CVE N ELPG SQL++ VMDYDDIG D+LIG T IDLEDRWFD RWQ
Sbjct: 59 EANVDGKPFEDYLLFRQDKRG---GKKVKRVVGKFKGLVRVVL-DENEAPLFD------------------LDELLRPQTYKVRLYVLEAKNLTPMDVGFMGKQGKSDPYLVARLGKDTFNDKDNYQMDLVNADLYRCVEFNTELPGISQLEVAVMDYDDIGFDDLIGKTVIDLEDRWFDQRWQ 220
BLAST of mRNA_M-pyrifera_M_contig12196.4511.1 vs. uniprot
Match: A0A2D4BI12_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BI12_PYTIN) HSP 1 Score: 158 bits (400), Expect = 2.300e-41 Identity = 93/201 (46.27%), Postives = 115/201 (57.21%), Query Frame = 1
Query: 1 EEELESTPFETHDLVRGQS------LGL-----------VGGISNLKVVGKLKCVVRVTEGNPDDDPLFVDKDNFATLAQAKARNDAIMGEILKPKGYKMRLYVLQALNLTPMDIGIGGRPGKSDPYLRISLGKEVIDDRANYIDDVTDAMIYKCVELNCELPGASQLKIEVMDYDDIGRDELIGSTTIDLEDRWFDTRWQ 552
E EL++TPFE + L GQ LG+ VGG K G K +VR+ E D L VD+ +LKP Y++R+YVL PMD G+ GRPGKSDPYL+++LGKE +DDR NYIDD TD YK +L+ LPGAS LKI+ D+D IG D+LIG+TTIDLEDR FD RWQ
Sbjct: 1150 ENELKTTPFEKYALHIGQKQKKTSLLGMLNPFSKKVPRDVGGAGIYKTAGFFKGLVRIMEREDDKPLLDVDR-------------------LLKPLPYEVRVYVLDGAGFAPMDPGLNGRPGKSDPYLKLTLGKEKVDDRKNYIDDTTDPDFYKMFQLSAVLPGASILKIDAYDFDLIGGDDLIGTTTIDLEDRVFDQRWQ 1331
BLAST of mRNA_M-pyrifera_M_contig12196.4511.1 vs. uniprot
Match: K3X523_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X523_GLOUD) HSP 1 Score: 155 bits (393), Expect = 1.920e-40 Identity = 88/200 (44.00%), Postives = 113/200 (56.50%), Query Frame = 1
Query: 1 EEELESTPFETHDLVRGQSL----------------GLVGGISNLKVVGKLKCVVRVTEGNPDDDPLFVDKDNFATLAQAKARNDAIMGEILKPKGYKMRLYVLQALNLTPMDIGIGGRPGKSDPYLRISLGKEVIDDRANYIDDVTDAMIYKCVELNCELPGASQLKIEVMDYDDIGRDELIGSTTIDLEDRWFDTRWQ 552
E EL++TPFE + L GQ VGG K+ G+ K ++R+ E D+ PL M ++K Y++R+YVL + PMD+G+ GRPGKSDPYLR+ LGKE +DDR N+IDD TD YK ++N LPGAS L IE MD+D +G D+LIG TTIDLEDR FD RWQ
Sbjct: 610 ESELKTTPFEKYALHIGQKQKKRSMLAMLNPFKKKPASVGGDGLYKIAGQFKGLIRIIE-REDERPLLD------------------MERLMKSLPYEIRIYVLDGVGFAPMDLGLNGRPGKSDPYLRMKLGKEKVDDRKNFIDDTTDPDFYKMYQINALLPGASILTIEAMDHDFVGGDDLIGRTTIDLEDRLFDQRWQ 790
BLAST of mRNA_M-pyrifera_M_contig12196.4511.1 vs. uniprot
Match: A0A5D6XHY7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XHY7_9STRA) HSP 1 Score: 153 bits (387), Expect = 1.290e-39 Identity = 87/201 (43.28%), Postives = 115/201 (57.21%), Query Frame = 1
Query: 1 EEELESTPFETHDLVRGQ-----------------SLGLVGGISNLKVVGKLKCVVRVTEGNPDDDPLFVDKDNFATLAQAKARNDAIMGEILKPKGYKMRLYVLQALNLTPMDIGIGGRPGKSDPYLRISLGKEVIDDRANYIDDVTDAMIYKCVELNCELPGASQLKIEVMDYDDIGRDELIGSTTIDLEDRWFDTRWQ 552
E EL++TPFE + L GQ + +GG K+ G+ K ++RV E + L V++ +LKP Y++R+YVL + PMD+G+ GRPGKSDPYLR+ LGK+ +DDR N+I+D TD YK ++ LPGAS L IE MD+D IG D+LIGSTTIDLEDR FD RWQ
Sbjct: 1272 EGELKTTPFEKYALHIGQRQKKRSMLAALNPFKKKAPPTIGGDGVYKMAGQFKGLIRVIEREDEKPLLDVER-------------------LLKPMPYEVRVYVLDGVGFAPMDMGLNGRPGKSDPYLRLKLGKQKVDDRKNFIEDTTDPDFYKVFTISATLPGASILTIEAMDHDFIGGDDLIGSTTIDLEDRLFDQRWQ 1453
BLAST of mRNA_M-pyrifera_M_contig12196.4511.1 vs. uniprot
Match: A0A8K1FFZ5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FFZ5_PYTOL) HSP 1 Score: 152 bits (384), Expect = 3.260e-39 Identity = 88/201 (43.78%), Postives = 116/201 (57.71%), Query Frame = 1
Query: 1 EEELESTPFETHDLVRGQS------LGLV-----------GGISNLKVVGKLKCVVRVTEGNPDDDPLFVDKDNFATLAQAKARNDAIMGEILKPKGYKMRLYVLQALNLTPMDIGIGGRPGKSDPYLRISLGKEVIDDRANYIDDVTDAMIYKCVELNCELPGASQLKIEVMDYDDIGRDELIGSTTIDLEDRWFDTRWQ 552
E +L++TPFE + L GQ L ++ GG K G K ++R+ E D+ PL M +LK Y++R+YVL+ + PMD G+ GRPGKSDPYL+++LGKE ++DR NYIDD T+ YK +++ LPGAS LKI+ MDYD IG D+LIGSTTIDLEDR FD RWQ
Sbjct: 1249 ENQLKTTPFEKYALHIGQKQKKQSLLSILNPFSKKAPKETGGGGTYKTAGFFKGLIRIME-REDEKPLLD------------------MDRLLKAHPYEIRVYVLEGVGFAPMDPGLNGRPGKSDPYLKLTLGKEKVNDRKNYIDDTTEPDFYKMYKVSATLPGASLLKIDAMDYDLIGGDDLIGSTTIDLEDRLFDQRWQ 1430 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12196.4511.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12196.4511.1 >prot_M-pyrifera_M_contig12196.4511.1 ID=prot_M-pyrifera_M_contig12196.4511.1|Name=mRNA_M-pyrifera_M_contig12196.4511.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=193bp EEELESTPFETHDLVRGQSLGLVGGISNLKVVGKLKCVVRVTEGNPDDDPback to top mRNA from alignment at M-pyrifera_M_contig12196:473..5639+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12196.4511.1 ID=mRNA_M-pyrifera_M_contig12196.4511.1|Name=mRNA_M-pyrifera_M_contig12196.4511.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=5167bp|location=Sequence derived from alignment at M-pyrifera_M_contig12196:473..5639+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12196:473..5639+ >mRNA_M-pyrifera_M_contig12196.4511.1 ID=mRNA_M-pyrifera_M_contig12196.4511.1|Name=mRNA_M-pyrifera_M_contig12196.4511.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1158bp|location=Sequence derived from alignment at M-pyrifera_M_contig12196:473..5639+ (Macrocystis pyrifera P11B4 male)back to top |