mRNA_M-pyrifera_M_contig121458.4418.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig121458.4418.1 vs. uniprot
Match: A0A7K1ZAK3_9ACTN (Malate synthase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1ZAK3_9ACTN) HSP 1 Score: 234 bits (598), Expect = 4.640e-72 Identity = 111/173 (64.16%), Postives = 131/173 (75.72%), Query Frame = 1
Query: 1 RVSSALRKVTVDKRREAGDGFDGTRIAHPALVPVARAEFDKVLGSRPNQITRQRDDVYVTADDLLTVPGIDGAVTLAGARANIRIVIRYVGEWLAGTAAVAIDDHFEDTAMAEICRTQLWQWLHHRIEVADGQVLDEALFTTLLDEEFAALQSSLGPEKWAAGRYPEATELLR 519
R + ALRKV DKRREAGDGFDGTRIA P +VP A EFDKVLG+RPNQ+ RQRDDVYVTA DLL V G+V+ G R NIRIVIRY+GEWL G AAV IDDH EDTAMAE+CR QLWQW HH++++++G LD L L+D+E L++ LG WAAGR+ EA ELL+
Sbjct: 326 RTAGALRKVAADKRREAGDGFDGTRIAVPQIVPTAVVEFDKVLGNRPNQVERQRDDVYVTAGDLLAVSSTRGSVSEGGVRTNIRIVIRYLGEWLVGNAAVPIDDHLEDTAMAEVCRAQLWQWCHHQVQLSNGLTLDRGLLEHLIDDETELLRTELGEAAWAAGRFVEARELLQ 498
BLAST of mRNA_M-pyrifera_M_contig121458.4418.1 vs. uniprot
Match: A0A354B8H6_9ACTN (Malate synthase (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A354B8H6_9ACTN) HSP 1 Score: 211 bits (537), Expect = 1.080e-63 Identity = 101/174 (58.05%), Postives = 121/174 (69.54%), Query Frame = 1
Query: 1 RVSSALRKVTVDKRREAGDGFDGTRIAHPALVPVARAEFDKVLGSRPNQITRQRDDVYVTADDLLTVPGIDGAVTLAGARANIRIVIRYVGEWLAGTAAVAIDDHFEDTAMAEICRTQLWQWLHHRIEVADGQVLDEALFTTLLDEEFAALQSSLGPEKWAAGRYPEATELLRS 522
R + +RKVTVDKRREAGDGFDGTRI PA+V +A AEFD+VL R NQ+ QRDDVY+TA DLLT+ G T +G R IR + Y+GEWL G AVAIDDH EDTAMAE+CR Q+WQW H + + +G V+D+AL L EE A L+ LG WA GRY A ELLR+
Sbjct: 255 RTAPMVRKVTVDKRREAGDGFDGTRIGQPAIVDIATAEFDRVLSYRANQLEVQRDDVYITASDLLTIHTSRGECTESGLRTAIRTAVHYIGEWLVGIGAVAIDDHLEDTAMAELCRAQIWQWRHQTVRLTNGVVVDDALLDRLFAEELAELRVHLGEPAWADGRYERAAELLRA 428
BLAST of mRNA_M-pyrifera_M_contig121458.4418.1 vs. uniprot
Match: A0A2D8LRM4_9ACTN (Malate synthase n=5 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8LRM4_9ACTN) HSP 1 Score: 209 bits (533), Expect = 4.640e-62 Identity = 100/174 (57.47%), Postives = 120/174 (68.97%), Query Frame = 1
Query: 1 RVSSALRKVTVDKRREAGDGFDGTRIAHPALVPVARAEFDKVLGSRPNQITRQRDDVYVTADDLLTVPGIDGAVTLAGARANIRIVIRYVGEWLAGTAAVAIDDHFEDTAMAEICRTQLWQWLHHRIEVADGQVLDEALFTTLLDEEFAALQSSLGPEKWAAGRYPEATELLRS 522
R + +RKVTVDKRREAGDGFDGTRI PA+V +A AEFD+VL R NQ+ QRDDVY+TA DLLT+ G T +G R IR + Y+GEWL G AVAIDDH EDTAMAE+CR Q+WQW H + + +G V+D+ L L EE A L+ LG WA GRY A ELLR+
Sbjct: 363 RTAPMVRKVTVDKRREAGDGFDGTRIGQPAIVDIATAEFDRVLSYRANQLEVQRDDVYITASDLLTIHTSRGECTESGLRTAIRTAVHYIGEWLVGIGAVAIDDHLEDTAMAELCRAQIWQWRHQSVRLTNGVVVDDTLLDRLFAEELAELRVHLGEPAWADGRYERAAELLRA 536
BLAST of mRNA_M-pyrifera_M_contig121458.4418.1 vs. uniprot
Match: A0A3M2GVB2_ACTSX (Malate synthase n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GVB2_ACTSX) HSP 1 Score: 208 bits (529), Expect = 7.260e-62 Identity = 97/168 (57.74%), Postives = 119/168 (70.83%), Query Frame = 1
Query: 13 ALRKVTVDKRREAGDGFDGTRIAHPALVPVARAEFDKVLGSRPNQITRQRDDVYVTADDLLTVPGIDGAVTLAGARANIRIVIRYVGEWLAGTAAVAIDDHFEDTAMAEICRTQLWQWLHHRIEVADGQVLDEALFTTLLDEEFAALQSSLGPEKWAAGRYPEATELL 516
AL KVT DKRREAGDGFDGT +AHP LVPVARAEFDKVLG RPNQ+ RQRDDVY+T DLL+VP G++T AG R N+ + IRY+ WL GT A AID+ ED A AEI R Q+WQW+HH +++GQ + L ++DEE + L +L E W AGRY +A +
Sbjct: 321 ALAKVTADKRREAGDGFDGTWVAHPDLVPVARAEFDKVLGDRPNQVERQRDDVYITPGDLLSVPSTGGSITEAGLRTNVSVGIRYLAAWLTGTGAAAIDNLMEDAATAEISRAQIWQWVHHAATLSNGQTVTAELVRRVIDEEMSRLADALDAEAWRAGRYDDARRVF 488
BLAST of mRNA_M-pyrifera_M_contig121458.4418.1 vs. uniprot
Match: A0A7Y5ZG21_9MICO (Malate synthase n=1 Tax=Leifsonia sp. C5G2 TaxID=2735269 RepID=A0A7Y5ZG21_9MICO) HSP 1 Score: 184 bits (467), Expect = 1.870e-52 Identity = 95/169 (56.21%), Postives = 116/169 (68.64%), Query Frame = 1
Query: 13 ALRKVTVDKRREAGDGFDGTRIAHPALVPVARAEFDKVLGSRPNQITRQRDDVYVTADDLLTVPGIDGAVTLAGARANIRIVIRYVGEWLAGTAAVAIDDHFEDTAMAEICRTQLWQWLHHRIEVADGQVLDEALFTTLLDEEFAALQSSLGPEKWAAGRYPEATELLR 519
AL+KV DKRREAGDGFDGT +AHP L+P A AEFD VLG RPNQ+ RQRDDV+VTADDLL V G D VT G RAN+ + +RY+ WL GT AVAID ED A AEI R+ L QW+ +RI A+G +D AL + +LDEE A L++ R+ +A +LLR
Sbjct: 347 ALQKVADDKRREAGDGFDGTWVAHPDLIPTALAEFDAVLGERPNQVERQRDDVHVTADDLLDVAGADATVTDGGVRANVSVALRYLEAWLRGTGAVAIDGLMEDAATAEISRSLLRQWIDNRIVTAEGAPVDAALVSHVLDEEQARLETD-------GSRFADAADLLR 508
BLAST of mRNA_M-pyrifera_M_contig121458.4418.1 vs. uniprot
Match: A0A524H018_9BACT (Malate synthase (Fragment) n=1 Tax=Gemmatimonadales bacterium TaxID=2448054 RepID=A0A524H018_9BACT) HSP 1 Score: 179 bits (455), Expect = 1.300e-51 Identity = 93/176 (52.84%), Postives = 120/176 (68.18%), Query Frame = 1
Query: 1 RVSSALRKVTVDKRREAGDGFDGTRIAHPALVPVARAEFDKVLGSRPNQITRQRDDVYVTADDLLTVPGIDGAVTLAGARANIRIVIRYVGEWLAGTAAVAIDDHFEDTAMAEICRTQLWQWLHHRIEV--ADGQV--LDEALFTTLLDEEFAALQSSLGPEKWAAGRYPEATELL 516
R +AL KV VDKRREAGDG DGT +AHP LVP+A F VLG++ NQ+ R+DV+VTA DLLTVP +G T AG R NIR+ I Y+ WLAG V + D ED A AEICR+Q+WQWLH+ +++ ADG + L EA F ++ EEFA ++ +G ++AA RYPEA +L
Sbjct: 237 RNEAALEKVRVDKRREAGDGHDGTWVAHPGLVPIALDVFTNVLGTKRNQLDVMREDVHVTAADLLTVP--EGTRTEAGLRHNIRVGIHYLAVWLAGNGCVPLYDLMEDAATAEICRSQVWQWLHNGVDITMADGSMATLTEAAFRQMVTEEFAGIKEEIGEVRFAAARYPEARDLF 410
BLAST of mRNA_M-pyrifera_M_contig121458.4418.1 vs. uniprot
Match: A0A0Q6R946_9MICO (Malate synthase n=3 Tax=Yonghaparkia TaxID=355929 RepID=A0A0Q6R946_9MICO) HSP 1 Score: 181 bits (459), Expect = 3.740e-51 Identity = 94/170 (55.29%), Postives = 111/170 (65.29%), Query Frame = 1
Query: 13 ALRKVTVDKRREAGDGFDGTRIAHPALVPVARAEFDKVLGSRPNQITRQRDDVYVTADDLLTVPGIDGAVTLAGARANIRIVIRYVGEWLAGTAAVAIDDHFEDTAMAEICRTQLWQWLHHRIEVADGQVLDEALFTTLLDEEFAALQSSLGPEKWAAGRYPEATELLRS 522
AL +V DKRREAGDGFDG+ +AHP L+PVARAEFD VLG RPNQ+ RQRDDV+VTA DLL V G VTLAG RANI I IRY+ WL G A AID+ ED A AEI R+QLWQW+H +G+ + L +L E A+L + G R EA EL R+
Sbjct: 359 ALERVAADKRREAGDGFDGSWVAHPDLIPVARAEFDAVLGDRPNQLDRQRDDVHVTARDLLDVRSAGGEVTLAGVRANIAITIRYLDSWLRGIGAAAIDNLMEDAATAEISRSQLWQWIHQDHVTVEGETITRGLVEGMLAEVLASLPHAPG------SRLAEAEELFRT 522
BLAST of mRNA_M-pyrifera_M_contig121458.4418.1 vs. uniprot
Match: A0A1C4ZLB6_9ACTN (Malate synthase n=1 Tax=Micromonospora marina TaxID=307120 RepID=A0A1C4ZLB6_9ACTN) HSP 1 Score: 171 bits (433), Expect = 8.070e-51 Identity = 86/148 (58.11%), Postives = 103/148 (69.59%), Query Frame = 1
Query: 10 SALRKVTVDKRREAGDGFDGTRIAHPALVPVARAEFDKVLGSRPNQITRQRDDVYVTADDLLTVPGIDGAVTLAGARANIRIVIRYVGEWLAGTAAVAIDDHFEDTAMAEICRTQLWQWLHHRIEVADGQVLDEALFTTLLDEEFAAL 453
+ALR+V DKRREAGDGFDG+ +AHP LV R EFD VLG RPNQ+ R R+DV VTA DLL V G VT AG R++I + +RYV WLAGT AVA+ + ED A AEI R Q+WQWLHHR +A G + E L ++L EE AAL
Sbjct: 15 TALRRVRADKRREAGDGFDGSWVAHPGLVDTCREEFDAVLGDRPNQLDRLRNDVDVTATDLLAVDKTPGQVTAAGLRSDIAVALRYVDAWLAGTGAVALWNLMEDAATAEIARCQVWQWLHHRTPLAGGGCVTEDLVRSILAEELAAL 162
BLAST of mRNA_M-pyrifera_M_contig121458.4418.1 vs. uniprot
Match: UPI00145CB8E6 (malate synthase A n=1 Tax=Yonghaparkia TaxID=355929 RepID=UPI00145CB8E6) HSP 1 Score: 180 bits (456), Expect = 9.580e-51 Identity = 92/170 (54.12%), Postives = 111/170 (65.29%), Query Frame = 1
Query: 13 ALRKVTVDKRREAGDGFDGTRIAHPALVPVARAEFDKVLGSRPNQITRQRDDVYVTADDLLTVPGIDGAVTLAGARANIRIVIRYVGEWLAGTAAVAIDDHFEDTAMAEICRTQLWQWLHHRIEVADGQVLDEALFTTLLDEEFAALQSSLGPEKWAAGRYPEATELLRS 522
AL +V DKRREAGDGFDG+ +AHP L+PVARAEFD VLG +PNQ+ RQRDDV+VTA DLL + G VTLAG RANI I +RY+ WL G AVA+D+ ED A AEI R+QLWQW+H +G+ + L +L E A L G RY EA EL R+
Sbjct: 359 ALERVAADKRREAGDGFDGSWVAHPDLIPVARAEFDAVLGEKPNQLDRQRDDVHVTARDLLDIRSAGGEVTLAGVRANISITVRYLEAWLRGLGAVALDNLMEDAATAEISRSQLWQWIHQDHVTVEGEQVTRELVERMLGEVLAELPRPAGH------RYAEAEELFRT 522
BLAST of mRNA_M-pyrifera_M_contig121458.4418.1 vs. uniprot
Match: A0A6I3C760_9ACTN (Malate synthase n=5 Tax=root TaxID=1 RepID=A0A6I3C760_9ACTN) HSP 1 Score: 179 bits (453), Expect = 1.560e-50 Identity = 86/173 (49.71%), Postives = 114/173 (65.90%), Query Frame = 1
Query: 4 VSSALRKVTVDKRREAGDGFDGTRIAHPALVPVARAEFDKVLGSRPNQITRQRDDVYVTADDLLTVPGIDGAVTLAGARANIRIVIRYVGEWLAGTAAVAIDDHFEDTAMAEICRTQLWQWLHHRIEVADGQVLDEALFTTLLDEEFAALQSSLGPEKWAAGRYPEATELLRS 522
+A+ KV DK+REAGDG DGT +AHP LV +AR EFD VLG RPNQ+ +QR DV+VTA DLL+V G+VT G R N+ + +RY+ WL+G A AI + ED A AEI R QLWQW+ H + A+G V+D A+ ++DEE AA + LG E +AA + A E+ +
Sbjct: 334 TEAAMAKVHADKKREAGDGCDGTWVAHPDLVAIAREEFDAVLGDRPNQLDQQRPDVHVTAADLLSVAASGGSVTDNGVRVNVDVGLRYLDAWLSGIGAAAIHNLMEDAATAEISRAQLWQWVRHGVRTAEGTVVDAAMVRRVIDEELAARRDELGAEAYAASNFDAAREIFEA 506 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig121458.4418.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig121458.4418.1 >prot_M-pyrifera_M_contig121458.4418.1 ID=prot_M-pyrifera_M_contig121458.4418.1|Name=mRNA_M-pyrifera_M_contig121458.4418.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=174bp RVSSALRKVTVDKRREAGDGFDGTRIAHPALVPVARAEFDKVLGSRPNQIback to top mRNA from alignment at M-pyrifera_M_contig121458:8..529+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig121458.4418.1 ID=mRNA_M-pyrifera_M_contig121458.4418.1|Name=mRNA_M-pyrifera_M_contig121458.4418.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=522bp|location=Sequence derived from alignment at M-pyrifera_M_contig121458:8..529+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig121458:8..529+ >mRNA_M-pyrifera_M_contig121458.4418.1 ID=mRNA_M-pyrifera_M_contig121458.4418.1|Name=mRNA_M-pyrifera_M_contig121458.4418.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1044bp|location=Sequence derived from alignment at M-pyrifera_M_contig121458:8..529+ (Macrocystis pyrifera P11B4 male)back to top |