mRNA_M-pyrifera_M_contig120944.4304.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig120944.4304.1 vs. uniprot
Match: A0A7Y2GQR5_9ACTN (Phenylacetate-coenzyme A ligase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2GQR5_9ACTN) HSP 1 Score: 269 bits (688), Expect = 1.760e-86 Identity = 136/177 (76.84%), Postives = 152/177 (85.88%), Query Frame = 1
Query: 1 DQDGLVIMEDHFLPEIVDPDSGELLPDGEVGVLVLTSLTKEAFPVLRYWTGDLCSITREPSPCGRTHARMSGIVGRADDMLVIRGVNVYPSQVEHTLLGVEGVSAHFQLVVRREGTLDHLHLRVECIEELDIDDHPELARTVVDRLRSSLGLGVTVGIEPAGSVPRSEGGKLSRTHD 531
D+DGLVIMEDHFLPE+VDP++GE LPDGE+GVLVLTSLTK+AFPVLRYWTGDLCSITREP+PCGRTHARMSGIVGRADDMLVIRGVNVYPSQVEHTLL VEGVS HFQLVVRREGTLD L +R C +E D LA V ++SSLG+GV+V +E G++PRSEGGKLSR D
Sbjct: 254 DRDGLVIMEDHFLPEVVDPETGERLPDGEIGVLVLTSLTKQAFPVLRYWTGDLCSITREPAPCGRTHARMSGIVGRADDMLVIRGVNVYPSQVEHTLLSVEGVSPHFQLVVRREGTLDTLSIR--CEQEGSAGDATALADAVTVAMQSSLGIGVSVTVEAPGALPRSEGGKLSRVAD 428
BLAST of mRNA_M-pyrifera_M_contig120944.4304.1 vs. uniprot
Match: A0A7Y2ICK0_9ACTN (Phenylacetate--CoA ligase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2ICK0_9ACTN) HSP 1 Score: 246 bits (627), Expect = 1.610e-77 Identity = 130/177 (73.45%), Postives = 143/177 (80.79%), Query Frame = 1
Query: 4 QDGLVIMEDHFLPEIVDPDSGELLPDGEVGVLVLTSLTKEAFPVLRYWTGDLCSITREPSPCGRTHARMSGIVGRADDMLVIRGVNVYPSQVEHTLLGVEGVSAHFQLVVRREGTLDHLHLRVECIEELDIDDHPELART-VVDRLRSSLGLGVTVGIEPAGSVPRSEGGKLSRTHD 531
+DGLVIMEDHFLPE+VDP++GE LPDGEVGVLVLTSLTK+AFPVLRYWTGDLCSI R+PSPCGRTHARMS IVGRADDMLVIRGVNVYPSQVEHTLL ++G S HFQLVV REG LD L +R E PE+ + VV L S+LG+ TV I GSVPRSEGGKLSRT D
Sbjct: 235 RDGLVIMEDHFLPEVVDPETGEPLPDGEVGVLVLTSLTKQAFPVLRYWTGDLCSIRRDPSPCGRTHARMSAIVGRADDMLVIRGVNVYPSQVEHTLLTIKGASPHFQLVVTREGNLDTLMVRCE---HDGTGGPPEVIQAAVVAALTSALGITATVSIHEPGSVPRSEGGKLSRTLD 408
BLAST of mRNA_M-pyrifera_M_contig120944.4304.1 vs. uniprot
Match: A0A2D6L2N4_9ACTN (Phenylacetate-coenzyme A ligase n=5 Tax=Actinobacteria TaxID=201174 RepID=A0A2D6L2N4_9ACTN) HSP 1 Score: 239 bits (611), Expect = 1.150e-74 Identity = 122/183 (66.67%), Postives = 146/183 (79.78%), Query Frame = 1
Query: 1 DQDGLVIMEDHFLPEIVDPDSGELLPDGEVGVLVLTSLTKEAFPVLRYWTGDLCSITREPSPCGRTHARMSGIVGRADDMLVIRGVNVYPSQVEHTLLGVEGVSAHFQLVVRREGTLDHLHLRVE------CIEELDIDDHPELARTVVDRLRSSLGLGVTVGIEPAGSVPRSEGGKLSRTHD 531
D+ GLV+MEDHF PEIV PD+GE+L +GEVGVLVLTSLTK+AFP+LRYWTGDLCS+TREPSPCGRTHAR+S IVGR+DDM+VIRGVNVYPSQVEH LLGV+ + HF+LVV R+GTLD+L + VE +EE+ L +V D LRSSLG+GV V + G++PRSEGGKLSR D
Sbjct: 269 DRSGLVVMEDHFYPEIVHPDTGEVLDEGEVGVLVLTSLTKQAFPILRYWTGDLCSMTREPSPCGRTHARISSIVGRSDDMIVIRGVNVYPSQVEHALLGVDLAAPHFRLVVTRDGTLDNLTVEVEPADGVGSVEEVG----SSLGASVSDALRSSLGIGVAVTVAERGALPRSEGGKLSRVDD 447
BLAST of mRNA_M-pyrifera_M_contig120944.4304.1 vs. uniprot
Match: A0A3M2A4S0_9CHLR (Phenylacetate-coenzyme A ligase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3M2A4S0_9CHLR) HSP 1 Score: 197 bits (502), Expect = 2.080e-58 Identity = 101/191 (52.88%), Postives = 128/191 (67.02%), Query Frame = 1
Query: 4 QDGLVIMEDHFLPEIVDPDSGELLPDGEVGVLVLTSLTKEAFPVLRYWTGDLCSITREPSPCGRTHARMSGIVGRADDMLVIRGVNVYPSQVEHTLLGVEGVSAHFQLVVRREGTLDHLHLRVECIE---------------ELDIDDHPELARTVVDRLRSSLGLGVTVGIEPAGSVPRSEGGKLSRTHD 531
+DG I EDHF+PE+++PD+GE +PDGEVG LV T+LTKEA P+LRY TGDL SITREP CGRTHARMS I+GR DDML+IRGVNV+PSQ+E L+G+ ++ H +++V RE LD L ++VE E E + D EL + + L +LGL V V + P G PRSEGGKL R D
Sbjct: 252 KDGAHIFEDHFIPEVINPDTGEPVPDGEVGELVFTTLTKEAIPLLRYRTGDLASITREPCKCGRTHARMSRIIGRVDDMLIIRGVNVFPSQIEAALVGIPNITPHHRIIVTRENRLDQLEVQVEVTESFFRQVGEEMFMGHPESGVQDLKELEGLLFEALHDALGLNVKVTLLPPGQAPRSEGGKLKRVVD 442
BLAST of mRNA_M-pyrifera_M_contig120944.4304.1 vs. uniprot
Match: A0A0N0BM80_THEAQ (Phenylacetate-coenzyme A ligase n=3 Tax=Thermus aquaticus TaxID=271 RepID=A0A0N0BM80_THEAQ) HSP 1 Score: 196 bits (499), Expect = 5.560e-58 Identity = 104/193 (53.89%), Postives = 130/193 (67.36%), Query Frame = 1
Query: 1 DQDGLVIMEDHFLPEIVDPDSGELLPDGEVGVLVLTSLTKEAFPVLRYWTGDLCSITREPSPCGRTHARMSGIVGRADDMLVIRGVNVYPSQVEHTLLGVEGVSAHFQLVVRREGTLDHLHLRVECIEELDID-------------DHP--ELARTVVDRLRSSLGLGVTVGIEPAGSVPRSEGGKLSRTHDL 534
++ G I EDHFLPE+VDPD+GE LP+G+VGVLVLT+LTKEA P+LRYWTGDL +T EP CGRTH RM I+GR DDML+IRGVNVYP+QVE LLG+ V ++Q+VVRREGTLD L+VE EE + DH L V +++ ++G+ + V + G PRSEGGKL R DL
Sbjct: 251 ERQGSHIWEDHFLPEVVDPDTGEPLPEGKVGVLVLTNLTKEAMPLLRYWTGDLTFLTYEPCACGRTHVRMGPILGRTDDMLIIRGVNVYPTQVEAVLLGIPEVVPYYQIVVRREGTLDEAELKVEVSEEFFREIGEKALSDEVIEADHRLHALREKVAHKIKDTIGVSMRVTLLAPGQAPRSEGGKLRRVLDL 443
BLAST of mRNA_M-pyrifera_M_contig120944.4304.1 vs. uniprot
Match: A0A399F9Q7_9DEIN (Phenylacetate-coenzyme A ligase n=2 Tax=Meiothermus TaxID=65551 RepID=A0A399F9Q7_9DEIN) HSP 1 Score: 194 bits (492), Expect = 5.220e-57 Identity = 97/177 (54.80%), Postives = 127/177 (71.75%), Query Frame = 1
Query: 19 IMEDHFLPEIVDPDSGELLPDGEVGVLVLTSLTKEAFPVLRYWTGDLCSITREPSPCGRTHARMSGIVGRADDMLVIRGVNVYPSQVEHTLLGVEGVSAHFQLVVRREGTLDHLHLRVECIEEL-----DIDDHPELARTVVDRLRSSLGLGVTVGIEPAGSVPRSEGGKLSRTHDL 534
+ EDHF PE+VDP++G+ LPDGEVGVLVLT+LTK+A P+LRYWTGDL SITREP P GRTHARM+ I GRADDML+IRGVNVYP+Q+E LL V V+ H+Q+ V R LD + L++E E + +L + V +++ ++G+ + V + P G+ PRSEGGKL R DL
Sbjct: 259 LWEDHFYPEVVDPETGDPLPDGEVGVLVLTTLTKKALPLLRYWTGDLTSITREPGPSGRTHARMAQIRGRADDMLIIRGVNVYPTQIEAVLLEVPEVAPHYQITVTRPEILDEVELKLEVAETFYEQYGEEALRSDLGQRVAHKIKENVGVSLAVTLIPPGTAPRSEGGKLKRVADL 435
BLAST of mRNA_M-pyrifera_M_contig120944.4304.1 vs. uniprot
Match: G8NDE8_9DEIN (Phenylacetate-coenzyme A ligase n=1 Tax=Thermus sp. CCB_US3_UF1 TaxID=1111069 RepID=G8NDE8_9DEIN) HSP 1 Score: 193 bits (490), Expect = 1.220e-56 Identity = 102/193 (52.85%), Postives = 129/193 (66.84%), Query Frame = 1
Query: 1 DQDGLVIMEDHFLPEIVDPDSGELLPDGEVGVLVLTSLTKEAFPVLRYWTGDLCSITREPSPCGRTHARMSGIVGRADDMLVIRGVNVYPSQVEHTLLGVEGVSAHFQLVVRREGTLDHLHLRVECIE-------------ELDIDDHP--ELARTVVDRLRSSLGLGVTVGIEPAGSVPRSEGGKLSRTHDL 534
++ G I EDHFLPE+VDP++GE LP+G+VGVLVLT+LTKEA P+LRYWTGDL +T P CGRTH RM ++GR DDML+IRGVNVYP+QVE LLG+ V ++Q+VVRREGTLD L+VE E E+ DH L V R++ ++G+ + V + G PRSEGGKL R DL
Sbjct: 250 ERQGSHIWEDHFLPEVVDPETGEPLPEGKVGVLVLTTLTKEAMPLLRYWTGDLTFLTYAPCSCGRTHVRMGPVLGRTDDMLIIRGVNVYPTQVEAVLLGIPEVEPYYQIVVRREGTLDEAELKVEVSEAFFREIGQKALSDEVIEADHRLHALRERVAHRIKDTIGVSMKVTLLAPGGAPRSEGGKLRRVLDL 442
BLAST of mRNA_M-pyrifera_M_contig120944.4304.1 vs. uniprot
Match: PAAK_THET2 (Phenylacetate-coenzyme A ligase n=31 Tax=Thermaceae TaxID=188786 RepID=PAAK_THET2) HSP 1 Score: 192 bits (487), Expect = 3.400e-56 Identity = 102/193 (52.85%), Postives = 128/193 (66.32%), Query Frame = 1
Query: 1 DQDGLVIMEDHFLPEIVDPDSGELLPDGEVGVLVLTSLTKEAFPVLRYWTGDLCSITREPSPCGRTHARMSGIVGRADDMLVIRGVNVYPSQVEHTLLGVEGVSAHFQLVVRREGTLDHLHLRVECIE-------------ELDIDDHP--ELARTVVDRLRSSLGLGVTVGIEPAGSVPRSEGGKLSRTHDL 534
++ G I EDHFLPE+VDPD+GE LP+G+VGVLV T+LTKEA P+LRYWTGDL +T E CGRTH RM I+GR DDML+IRGVNVYP+QVE LL + V H+Q+VVRREGTLD L+VE E E+ DH L + +++ ++G+ + V + P G PRSEGGKL R DL
Sbjct: 251 ERQGSHIWEDHFLPEVVDPDTGEPLPEGKVGVLVFTTLTKEAMPLLRYWTGDLTFLTYEACTCGRTHVRMGPILGRTDDMLIIRGVNVYPTQVEAVLLAIPEVVPHYQIVVRREGTLDEAELKVEVSEPFFREIGQEVLSDEVVEADHRLHALRERIARKIKDNVGVTLKVTLLPPGQAPRSEGGKLRRVLDL 443
BLAST of mRNA_M-pyrifera_M_contig120944.4304.1 vs. uniprot
Match: D7BIK6_MEISD (Phenylacetate-coenzyme A ligase n=2 Tax=Meiothermus silvanus TaxID=52022 RepID=D7BIK6_MEISD) HSP 1 Score: 192 bits (487), Expect = 3.720e-56 Identity = 101/187 (54.01%), Postives = 126/187 (67.38%), Query Frame = 1
Query: 19 IMEDHFLPEIVDPDSGELLPDGEVGVLVLTSLTKEAFPVLRYWTGDLCSITREPSPCGRTHARMSGIVGRADDMLVIRGVNVYPSQVEHTLLGVEGVSAHFQLVVRREGTLDHLHLRVECIE-------------ELDIDDHP--ELARTVVDRLRSSLGLGVTVGIEPAGSVPRSEGGKLSRTHDL 534
I EDHF PEIV P++GE LP+GE GVLVLT+LTK+A P+LRYWTGDL ITREP+P GRTHARM I GR DDML+IRGVNVYP+Q+E L G+ V H+Q+VV R+GTLD + L+VE E E+ DH L V +++ ++G+ V V + G+ PRSEGGKL R DL
Sbjct: 259 IWEDHFYPEIVHPETGEPLPEGETGVLVLTTLTKKAMPILRYWTGDLTFITREPAPSGRTHARMGQIRGRTDDMLIIRGVNVYPTQIEEVLKGIAEVEPHYQIVVSRQGTLDEVELKVELAEGFYRHIGAQMLSDEVVEADHQLSALRDKVAFKIKDNVGVSVKVSLLSPGTAPRSEGGKLKRVADL 445
BLAST of mRNA_M-pyrifera_M_contig120944.4304.1 vs. uniprot
Match: K7QWQ2_THEOS (Phenylacetate-coenzyme A ligase n=38 Tax=Thermaceae TaxID=188786 RepID=K7QWQ2_THEOS) HSP 1 Score: 191 bits (486), Expect = 4.680e-56 Identity = 102/190 (53.68%), Postives = 126/190 (66.32%), Query Frame = 1
Query: 10 GLVIMEDHFLPEIVDPDSGELLPDGEVGVLVLTSLTKEAFPVLRYWTGDLCSITREPSPCGRTHARMSGIVGRADDMLVIRGVNVYPSQVEHTLLGVEGVSAHFQLVVRREGTLDHLHLRVECIE-------------ELDIDDHP--ELARTVVDRLRSSLGLGVTVGIEPAGSVPRSEGGKLSRTHDL 534
G I EDHFLPE+VDPD+GE LP+G VGVLV T+LTKEA P+LRYWTGDL +T EP CGRTH RM I+GR DDML+IRGVNVYP+QVE LLG+ V ++Q+V+RREGTLD L+VE E E+ DH L V +++ ++G+ + V + G PRSEGGKL R DL
Sbjct: 253 GSHIWEDHFLPEVVDPDTGEPLPEGRVGVLVFTTLTKEAMPLLRYWTGDLTFLTYEPCTCGRTHVRMGPILGRTDDMLIIRGVNVYPTQVEAVLLGIPEVEPYYQIVLRREGTLDEAELKVEVSEAFFQEIGKKALSDEVIEADHRLHALREKVARKVKDTIGVTMRVTLLAPGEAPRSEGGKLKRVLDL 442 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig120944.4304.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig120944.4304.1 >prot_M-pyrifera_M_contig120944.4304.1 ID=prot_M-pyrifera_M_contig120944.4304.1|Name=mRNA_M-pyrifera_M_contig120944.4304.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=171bp MEDHFLPEIVDPDSGELLPDGEVGVLVLTSLTKEAFPVLRYWTGDLCSITback to top mRNA from alignment at M-pyrifera_M_contig120944:2..535- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig120944.4304.1 ID=mRNA_M-pyrifera_M_contig120944.4304.1|Name=mRNA_M-pyrifera_M_contig120944.4304.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=534bp|location=Sequence derived from alignment at M-pyrifera_M_contig120944:2..535- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig120944:2..535- >mRNA_M-pyrifera_M_contig120944.4304.1 ID=mRNA_M-pyrifera_M_contig120944.4304.1|Name=mRNA_M-pyrifera_M_contig120944.4304.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1026bp|location=Sequence derived from alignment at M-pyrifera_M_contig120944:2..535- (Macrocystis pyrifera P11B4 male)back to top |