mRNA_M-pyrifera_M_contig120225.4175.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig120225.4175.1 vs. uniprot
Match: A0A2E7CXQ6_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7CXQ6_9PLAN) HSP 1 Score: 121 bits (304), Expect = 3.600e-33 Identity = 59/120 (49.17%), Postives = 87/120 (72.50%), Query Frame = 1
Query: 1 ERAMLLFAQLAAVAALKQQPIGRDRFLVLTGISATRAGWPDVAARCYELVTANSPQHILGHYSSFADALRDAEFQAFVKQVEKFCTPERGEHLLSEMKMQ-LPTIGEMQTAGDLCRRLLE 357
ER ML+F +LA ++ KQQ IGRD+FL+L + A RAGW +V+ +C +LVT ++P H+L Y + ADALR +FQ+F +Q+E+FC+ ERGEHLL+E+ ++ LP G + AG+ C LL+
Sbjct: 5 ERGMLIFTRLAVISHEKQQAIGRDKFLILAAVEACRAGWLEVSEKCRQLVTESNPLHLLNRYETVADALRSEDFQSFARQLERFCSLERGEHLLTELGIEPLPPDGSL--AGNFCEDLLD 122
BLAST of mRNA_M-pyrifera_M_contig120225.4175.1 vs. uniprot
Match: A0A836REN1_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A836REN1_9PLAN) HSP 1 Score: 111 bits (277), Expect = 5.500e-29 Identity = 55/120 (45.83%), Postives = 84/120 (70.00%), Query Frame = 1
Query: 1 ERAMLLFAQLAAVAALKQQPIGRDRFLVLTGISATRAGWPDVAARCYELVTANSPQHILGHYSSFADALRDAEFQAFVKQVEKFCTPERGEHLLSEMKMQLPTIGEMQTA-GDLCRRLLE 357
E ML++A+LA +AA ++Q +GRDRFL+L G++A RAGWP VA RC +V ++PQH++G Y S +DA+RD Q F K++E+FC ER E+LLSE+ + + + + Q + G R+L+
Sbjct: 5 ETEMLVYAKLAELAARRRQRLGRDRFLLLAGLAACRAGWPSVADRCRRMVLDHNPQHLVGRYDSMSDAVRDVRAQTFFKRLERFCPFERAEYLLSELGIAVAGLQQGQESPGQSADRMLD 124
BLAST of mRNA_M-pyrifera_M_contig120225.4175.1 vs. uniprot
Match: UPI001421EAF6 (hypothetical protein n=1 Tax=Rubinisphaera sp. JC658 TaxID=2713176 RepID=UPI001421EAF6) HSP 1 Score: 108 bits (270), Expect = 6.330e-28 Identity = 54/127 (42.52%), Postives = 83/127 (65.35%), Query Frame = 1
Query: 1 ERAMLLFAQLAAVAALKQQPIGRDRFLVLTGISATRAGWPDVAARCYELVTANSPQHILGHYSSFADALRDAEFQAFVKQVEKFCTPERGEHLLSEMKMQLPTIGEMQTAGDLCRRLLEPMSADSDV 381
ER ++++A+LAA + K+Q GRDRFL+L G++ATRAGWP +A LV N+P+H++G + +F DALR +F F+KQ+++ C PE+ +HLL ++ PTI DL +L M + +DV
Sbjct: 5 ERNLVIYARLAAASQAKRQLAGRDRFLILAGVAATRAGWPAIAEEARRLVQQNNPRHLIGQWDTFGDALRSEDFPVFLKQLQRICGPEQADHLLHSLRSD-PTIPPEPQTDDLGTAILA-MWSTADV 129
BLAST of mRNA_M-pyrifera_M_contig120225.4175.1 vs. uniprot
Match: UPI00029AF085 (hypothetical protein n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=UPI00029AF085) HSP 1 Score: 101 bits (252), Expect = 2.610e-25 Identity = 51/117 (43.59%), Postives = 71/117 (60.68%), Query Frame = 1
Query: 1 ERAMLLFAQLAAVAALKQQPIGRDRFLVLTGISATRAGWPDVAARCYELVTANSPQHILGHYSSFADALRDAEFQAFVKQVEKFCTPERGEHLLSEMKMQLPTIGEMQTAGDLCRRL 351
E M ++ QLAA++ KQQP+ RDRFL+L G+ A RAGWPDVAA C+ + ++P H + +FADALRD FQ V E++C E+ E +L E+ LP E+ + RL
Sbjct: 5 EMGMQVYVQLAAISDQKQQPLVRDRFLLLAGVEACRAGWPDVAACCHRKLIESNPAHQAKRFMTFADALRDEPFQQLVAHWERYCPFEKAEAMLRELNFPLPPPTELSLGEQMIARL 121
BLAST of mRNA_M-pyrifera_M_contig120225.4175.1 vs. uniprot
Match: A0A517ZRG3_9PLAN (Uncharacterized protein n=2 Tax=Symmachiella TaxID=2795780 RepID=A0A517ZRG3_9PLAN) HSP 1 Score: 101 bits (252), Expect = 3.170e-25 Identity = 52/96 (54.17%), Postives = 69/96 (71.88%), Query Frame = 1
Query: 1 ERAMLLFAQLAAVAALKQQPIGRDRFLVLTGISATRAGWPDVAARCYELVTANSPQHILGHYSSFADALRDAEFQAFVKQVEKFCTPERGEHLLSE 288
E AM FA+LA V+ KQQ RD+FL+LTGISA RA D+AARC E+V AN+PQH++ Y+S DALR +F+ F Q+++FCT E+ E+LL E
Sbjct: 4 EAAMTAFARLAEVSQQKQQYPQRDKFLLLTGISACRAACVDIAARCREIVLANNPQHLIRKYASLPDALRSEDFEVFHAQLDRFCTFEKAEYLLHE 99
BLAST of mRNA_M-pyrifera_M_contig120225.4175.1 vs. uniprot
Match: A0A257VTE5_9BACT (Uncharacterized protein n=1 Tax=Planctomycetales bacterium 12-60-4 TaxID=1970541 RepID=A0A257VTE5_9BACT) HSP 1 Score: 89.7 bits (221), Expect = 1.450e-20 Identity = 46/94 (48.94%), Postives = 61/94 (64.89%), Query Frame = 1
Query: 1 ERAMLLFAQLAAVAALKQQPIGRDRFLVLTGISATRAGWPDVAARCYELVTANSPQHILGHYSSFADALRDAEFQAFVKQVEKFCTPERGEHLL 282
E AM +AQLA ++ K+Q RDRFL+L G+ A RAGW DVA RC E+ + P H L ++S DALRD +F V+ E++C+ ER EHLL
Sbjct: 5 ETAMCAYAQLAVLSHEKRQTPARDRFLLLCGVEACRAGWLDVAVRCREIHNRSQPAHQLAKHASLPDALRDPDFGRVVEHWERWCSYERAEHLL 98
BLAST of mRNA_M-pyrifera_M_contig120225.4175.1 vs. uniprot
Match: A0A3L7SIJ4_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7SIJ4_9BACT) HSP 1 Score: 89.4 bits (220), Expect = 1.950e-20 Identity = 43/109 (39.45%), Postives = 67/109 (61.47%), Query Frame = 1
Query: 1 ERAMLLFAQLAAVAALKQQPIGRDRFLVLTGISATRAGWPDVAARCYELVTANSPQHILGHYSSFADALRDAEFQAFVKQVEKFCTPERGEHLLSEMKMQLPTIGEMQT 327
E AM ++ QLA ++ + Q DRFL+L G+ A RAGWP+VAARC+ + A +P H+ Y++ AD LR+ +FQ V + E++C E+GE +L ++ + E T
Sbjct: 5 EAAMTVYVQLAVISEQRHQSQVCDRFLLLAGVEACRAGWPEVAARCHARLIAANPAHLAARYTTIADGLRNEDFQKLVARWERYCPFEKGEAMLRQLDLPAVEPSEAST 113
BLAST of mRNA_M-pyrifera_M_contig120225.4175.1 vs. uniprot
Match: UPI0019BD5DCB (Uncharacterized protein n=1 Tax=Candidatus Saccharimonas sp. TaxID=1917697 RepID=UPI0019BD5DCB) HSP 1 Score: 86.3 bits (212), Expect = 1.220e-19 Identity = 42/85 (49.41%), Postives = 59/85 (69.41%), Query Frame = 1
Query: 1 ERAMLLFAQLAAVAALKQQPIGRDRFLVLTGISATRAGWPDVAARCYELVTANSPQHILGHYSSFADALRDAEFQAFVKQVEKFC 255
E AM + QLA ++ KQQ + RDRFL+L G A RAGW +VA RC E + A++P H L H+++ ADALR+A+FQ V + E++C
Sbjct: 5 EIAMCAYVQLAVLSDEKQQTLVRDRFLLLAGAEACRAGWLEVAERCREKLVASNPAHQLNHHATMADALRNADFQRLVAKWERYC 89
BLAST of mRNA_M-pyrifera_M_contig120225.4175.1 vs. uniprot
Match: A0A7C2PIT7_9PLAN (Uncharacterized protein n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=A0A7C2PIT7_9PLAN) HSP 1 Score: 87.4 bits (215), Expect = 1.230e-19 Identity = 48/123 (39.02%), Postives = 71/123 (57.72%), Query Frame = 1
Query: 1 ERAMLLFAQLAAVAALKQQPIGRDRFLVLTGISATRAGWPDVAARCYELVTANSPQHILGHYSSFADALRDAEFQAFVKQVEKFCTPERGEHLLSEMKMQLPTIGEMQTAGDLCRRLLEPMSA 369
E AM +AQLA ++ K+Q RDRFL+LTG+ A RAGWP+VAA C+ + N + + SF +ALRD EF E++C ER EHLL + + ++AG +LL+ +++
Sbjct: 5 ETAMCAYAQLAVLSHEKRQSPARDRFLLLTGVEACRAGWPEVAAACHGTLVQNRSPMQVTKFPSFEEALRDEEFSRIAAHWERWCPFERAEHLLQRLGNSPRSEAAGESAGAWVLQLLQALAS 127
BLAST of mRNA_M-pyrifera_M_contig120225.4175.1 vs. uniprot
Match: A0A353Z5K2_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A353Z5K2_9PLAN) HSP 1 Score: 82.0 bits (201), Expect = 1.840e-17 Identity = 44/94 (46.81%), Postives = 62/94 (65.96%), Query Frame = 1
Query: 1 ERAMLLFAQLAAVAALKQQPIGRDRFLVLTGISATRAGWPDVAARCYELVTANSPQHILGHYSSFADALRDAEFQAFVKQVEKFCTPERGEHLL 282
E +L++AQLAA A + Q RDRFLV G++A ++G P +A RC EL+ ++P H+L Y SF A A+FQAFV+Q+++ ER EHLL
Sbjct: 5 ETRLLVYAQLAATAQSRGQLAPRDRFLVQAGMAALQSGSPPLAERCRELILQHNPHHLLHRYVSFQVAAAAADFQAFVRQLDRNHPYERAEHLL 98 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig120225.4175.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig120225.4175.1 >prot_M-pyrifera_M_contig120225.4175.1 ID=prot_M-pyrifera_M_contig120225.4175.1|Name=mRNA_M-pyrifera_M_contig120225.4175.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=125bp MLLFAQLAAVAALKQQPIGRDRFLVLTGISATRAGWPDVAARCYELVTANback to top mRNA from alignment at M-pyrifera_M_contig120225:138..521+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig120225.4175.1 ID=mRNA_M-pyrifera_M_contig120225.4175.1|Name=mRNA_M-pyrifera_M_contig120225.4175.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=384bp|location=Sequence derived from alignment at M-pyrifera_M_contig120225:138..521+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig120225:138..521+ >mRNA_M-pyrifera_M_contig120225.4175.1 ID=mRNA_M-pyrifera_M_contig120225.4175.1|Name=mRNA_M-pyrifera_M_contig120225.4175.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=750bp|location=Sequence derived from alignment at M-pyrifera_M_contig120225:138..521+ (Macrocystis pyrifera P11B4 male)back to top |