mRNA_M-pyrifera_M_contig119856.4092.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig119856.4092.1 vs. uniprot
Match: A0A7V2CMK9_9BACT (Choice-of-anchor D domain-containing protein n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A7V2CMK9_9BACT) HSP 1 Score: 179 bits (455), Expect = 5.660e-49 Identity = 98/176 (55.68%), Postives = 124/176 (70.45%), Query Frame = 1
Query: 1 VSSGAPFAGAFRTPVELNNVNPQRLIIQGGNSTYESLNQGDTIAEVGAGVFNGSITQNAIEYGGNKGGVPNLDVLWVGSGSDVYFRSTAG-PLAPTSSDPTTGTIRDLAIDSDDWATAFIIDSN-QVFTTTNEGASWTDITGNLLTMANDLRSIRFVAGPNIDAIVVGTNQGVFVA 522
+ GA F TPVELN ++P RLII GGNSTYESL+QG+TI E G G+ G +A+ YGG GGVPN DVL+VGSG+ V+ R+TAG L TS P GTIRD+ +D DDW TAF++DSN QVF T + G +W DITGNL ++A +L+SI +V G + D +VVGTN GVF +
Sbjct: 584 IGGGAALVPQFVTPVELNALDPTRLIIGGGNSTYESLDQGNTITEAGPGI--GVNRPDAVSYGGTLGGVPNPDVLYVGSGNQVFVRTTAGGALNATSGLPGAGTIRDIVLDPDDWMTAFVVDSNSQVFHTPDGGGNWNDITGNLASVAGNLQSIEYVEGTSSDKLVVGTNTGVFTS 757
BLAST of mRNA_M-pyrifera_M_contig119856.4092.1 vs. uniprot
Match: A0A5C6F7V2_9BACT (Bacillopeptidase F n=1 Tax=Rubripirellula tenax TaxID=2528015 RepID=A0A5C6F7V2_9BACT) HSP 1 Score: 171 bits (432), Expect = 7.420e-46 Identity = 86/167 (51.50%), Postives = 121/167 (72.46%), Query Frame = 1
Query: 25 GAFRTPVELNNVNPQRLIIQGGNSTYESLNQGDTIAEVGAGVFNGSITQNAIEYGGNKGGVPNLDVLWVGSGSDVYFRSTA-GPLAPTSSDPTTGTIRDLAIDSDDWATAFIIDSNQVFTTTNEGASWTDITGNLLTMANDLRSIRFVAGPNIDAIVVGTNQGVFVA 522
G F TP+ +N ++P RL+IQGG+ TYE+ +Q +T+ + G NG TQ+A+ YGG K GV N DVLWVGS D++ R+ PLA T++DPT I DLAID +DWA+AF+ID+N VFTTT+ GASW D+TG+LL++A+ S+ +V+ +DA++VGTN GVF +
Sbjct: 757 GVFVTPLAINAIDPMRLVIQGGSQTYETFDQAETVVGLVEGP-NGGSTQSALAYGGRKDGVDNADVLWVGSDDDIFVRTNGTDPLALTAADPTGQDIIDLAIDPEDWASAFVIDTNSVFTTTDVGASWNDVTGDLLSLASRFFSVTYVSSAVVDAVLVGTNAGVFAS 922
BLAST of mRNA_M-pyrifera_M_contig119856.4092.1 vs. uniprot
Match: A0A368KQC4_9BACT (GEVED domain-containing protein n=1 Tax=Blastopirellula cremea TaxID=1031537 RepID=A0A368KQC4_9BACT) HSP 1 Score: 170 bits (430), Expect = 1.330e-45 Identity = 92/178 (51.69%), Postives = 119/178 (66.85%), Query Frame = 1
Query: 1 VSSGAPFAGAFRTPVELNNVNPQRLIIQGGNSTYESLNQGDTIAEV----GAGVFNGSITQNAIEYGGNKGGVPNLDVLWVGSGSDVYFRSTAGPLAPTSSDPTTGTIRDLAIDSDDWATAFIIDSNQVFTTTNEGASWTDITGNLLTMANDLRSIRFVAGPNIDAIVVGTNQGVFVA 522
++SG PF G FRTP+ELN VNP RL IQG + YESL+QGD+I EV + NG + QNAI GG GGV + +VLWVGS V FR G ++ P GTIRDLA+D+D+W + F+IDS V + + G SW DITG+LL A+ L S+ +VAG +DA+VVGTN GVF++
Sbjct: 569 LNSGTPFQGVFRTPMELNVVNPFRLAIQGASGFYESLDQGDSIDEVTVAGASSAANGDLNQNAIVAGGYSGGVASENVLWVGSDDRVLFRDDVGTQLVETNSPGLGTIRDLAVDTDEWRSVFVIDSTGVAMSGDAGTSWQDITGDLLNYASSLWSVSYVAGSVMDALVVGTNAGVFMS 746
BLAST of mRNA_M-pyrifera_M_contig119856.4092.1 vs. uniprot
Match: A0A1P8W8R6_9PLAN (Sodium/calcium exchanger 1 n=2 Tax=Fuerstiella marisgermanici TaxID=1891926 RepID=A0A1P8W8R6_9PLAN) HSP 1 Score: 169 bits (427), Expect = 3.520e-45 Identity = 88/167 (52.69%), Postives = 113/167 (67.66%), Query Frame = 1
Query: 25 GAFRTPVELNNVNPQRLIIQGGNSTYESLNQGDTIAEVGAGVFNGSITQNAIEYGGNKGGVPNLDVLWVGSGSDVYFRSTAGP-LAPTSSDPTTGTIRDLAIDSDDWATAFIIDSNQVFTTTNEGASWTDITGNLLTMAND--LRSIRFVAGPNIDAIVVGTNQGVF 516
G FRTPVELN+++P RL+IQG T+E+L+QG T + AG I QNA+ YGG K G N DVLWVGSG DV R+ G LAPT+SDPT+ I DL ID DDWA+A I+ N+V TT+ GASW D+TG+L T + + S+ ++A DA++VGTN GVF
Sbjct: 1107 GVFRTPVELNSIDPSRLVIQGAGETFETLDQGSTATSLNAGGIGNQIYQNALAYGGRKNGTDNADVLWVGSGDDVLVRTAGGAALAPTASDPTSDLIVDLTIDPDDWASAAIVTRNEVQVTTDTGASWFDVTGDLFTSFPNSAIYSVSYIANAVSDALIVGTNMGVF 1273
BLAST of mRNA_M-pyrifera_M_contig119856.4092.1 vs. uniprot
Match: UPI001EE8DFF6 (cadherin domain-containing protein n=1 Tax=Rubinisphaera sp. ICM_H10 TaxID=2909586 RepID=UPI001EE8DFF6) HSP 1 Score: 167 bits (424), Expect = 8.830e-45 Identity = 85/179 (47.49%), Postives = 124/179 (69.27%), Query Frame = 1
Query: 10 GAPFAGAFRTPVELNNVNPQRLIIQGGNSTYESLNQGDTIAEVGAGVFNGS-ITQNAIEYGGNKGGVPNLDVLWVGSGSDVYFRSTA-GPLAPTSSDPTTGTIRDLAIDSDDWATAFIIDSNQVFTTTNEGASWTDITGNLLTMANDLRSIRFVAGPNIDAIVVGTNQGVFVASTMDPG 540
GA F F TPVE N V RL+IQG N+ YESL+ G+TIA++G+G S I NA+ YGG + G+ N +++W +GSDV+ R++ G +A ++DPTT IRDLA++SDDW+ F+ D+NQVF TT+ GASW+DITG+LL+ A+++RS+ F ++ GTN+G+F++S G
Sbjct: 594 GAAFIPNFVTPVETNMVAGGRLLIQGANALYESLDSGNTIAQIGSGATGDSDIWTNALIYGGRQSGIDNPNLVWAAAGSDVFVRTSGTGNVAAVAADPTTSAIRDLAVNSDDWSNVFVADNNQVFMTTDTGASWSDITGDLLSYADEIRSLSFANSGTNQVVIAGTNEGIFISSITATG 772
BLAST of mRNA_M-pyrifera_M_contig119856.4092.1 vs. uniprot
Match: UPI0003173F4F (hypothetical protein n=1 Tax=Calothrix sp. PCC 7103 TaxID=32057 RepID=UPI0003173F4F) HSP 1 Score: 159 bits (402), Expect = 7.080e-42 Identity = 89/187 (47.59%), Postives = 118/187 (63.10%), Query Frame = 1
Query: 4 SSGAPFAGAFRTPVELNNVNPQRLIIQGGNSTYESLNQGDTIAEVGAGVFNGSITQNAIEYGGNKGGVPNLDVLWVGSGSDVYFRSTAG-PLAPTSSDPTTGTIRDLAIDSDDWATAFIIDSNQVFTTTNEGASWTDITGNLLTMAN---------DLRSIRFVAGPNIDAIVVGTNQGVFVASTMD 534
+ G A F TP+ELNN+N RL+I G N YESLN+GDTI +G G +QNA+ YGG GGV N+DV++ GSGS V R+ G APT++ G I DL +DS++W +AF+ID +QVF TT+ G +W DITGNL T A +LR+I FV+ +D I+VGTN GVF + + D
Sbjct: 527 TDGTTLAPNFVTPIELNNINQSRLLIGGSNGVYESLNRGDTITRIGFGT-----SQNAMAYGGRSGGVDNVDVVYYGSGSQVLLRTENGNQAAPTTNPFPGGFITDLVLDSNNWRSAFVIDQDQVFLTTDVGTTWNDITGNLQTFATSLGLQAADLNLRTIEFVSNSGVDGILVGTNFGVFSSISSD 708
BLAST of mRNA_M-pyrifera_M_contig119856.4092.1 vs. uniprot
Match: A0A2S8F0Q3_9BACT (Uncharacterized protein n=2 Tax=Pirellulaceae TaxID=2691357 RepID=A0A2S8F0Q3_9BACT) HSP 1 Score: 156 bits (395), Expect = 6.870e-41 Identity = 85/180 (47.22%), Postives = 109/180 (60.56%), Query Frame = 1
Query: 1 VSSGAPFAGAFRTPVELNNVNPQRLIIQGGNSTYESLNQGDTIAEV----GAGVFNGSITQNAIEYGGNKGGVPNLDVLWVGSGSDVYFRSTAGP-LAPTSSDPTTGTIRDLAIDSDDWATAFIIDSNQVFTTTNEGASWTDITGNLLTMANDLRSIRFVAGPNIDAIVVGTNQGVFVAS 525
V G + AFR P+ELN V+P R++ QG N YES +QGDTI+ V GA N I QNA+ GG + G+P +VLWVG+ + V++R G L T G I DL +D DDW + F+ID N V +N G SW DITGNL A+ L S+ FV G DA++VGTNQGVF +S
Sbjct: 1000 VGGGPQYEPAFRNPIELNVVDPTRIVFQGSNGVYESTDQGDTISYVSVVGGASAGNYWINQNALVAGGYRNGIPYENVLWVGADNSVFYRGETGTDLLETPVSAPVGIIHDLTVDPDDWTSVFVIDDNSVTLGSNAGTSWADITGNLGEFASSLTSLLFVEGSTTDALIVGTNQGVFASS 1179
BLAST of mRNA_M-pyrifera_M_contig119856.4092.1 vs. uniprot
Match: A0A2E7D4H5_9PLAN (Calx-beta domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7D4H5_9PLAN) HSP 1 Score: 151 bits (382), Expect = 3.820e-39 Identity = 89/178 (50.00%), Postives = 116/178 (65.17%), Query Frame = 1
Query: 10 GAPFAGAFRTPVELNNVNPQRLIIQGGNSTYESLNQGDTIAEVGAGV-FNGSITQNAIEYGGNKGGVPNLDVLWVGSGSDVYFRSTAGPLAPTSSDPTTGTIRDLAIDSDDWATAFIIDSNQVFTTTNEGASWTDITGNLLTMANDLRSIRFVAGPNIDAIVVGTNQGVFVASTMDPG 540
GA AG F TPV+LN V+P RLII GGNSTYESL+ GDT+ EVG G+ N +AI YGG GGVPN +VL+VGSG++V+ R AG APT + G RD+ +D ++ A+++ + VF T + G +WT+ITGN+ NDLRSI F+ G + A+VVG GV ST PG
Sbjct: 1408 GAAIAGQFSTPVQLNAVDPTRLIIGGGNSTYESLDMGDTVTEVGPGIGVNSGSGDDAISYGGFMGGVPNEEVLYVGSGNEVFVR-LAGTGAPTPTAFPGGVPRDIVLDPTNFMNAYVVSAGSVFQTLDGGGTWTNITGNI--PDNDLRSIEFIPGAD-PAVVVGGRTGVSRMSTATPG 1581
BLAST of mRNA_M-pyrifera_M_contig119856.4092.1 vs. uniprot
Match: A0A356AHT2_9PLAN (Cadherin domain-containing protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A356AHT2_9PLAN) HSP 1 Score: 146 bits (369), Expect = 2.080e-37 Identity = 84/176 (47.73%), Postives = 117/176 (66.48%), Query Frame = 1
Query: 1 VSSGAPFAGAFRTPVELNNVNPQRLIIQGGNSTYESLNQGDTIAEVGAGVFNGSITQNAIEYGGNKGGVPNLDVLWVGSGSDVYFRSTAGPLAPTSSDPTTGT---IRDLAIDSDDWATAFIIDSNQVFTTTNEGASWTDITGNLLTMA-NDLRSIRFVAGPNIDAIVVGTNQGVF 516
V+SG+ F TPVELN ++P+R+II G N YESLNQG+TIA+VGA F G + QNA++YGG + GV N DV + G DV R+T G A DP T I D+ ++++DW+ F IDSNQV+ + + G +WTDITGNL+++A N +++I +V+G +VVG N GVF
Sbjct: 644 VTSGSALIPQFSTPVELNRIDPRRMIIHGANGLYESLNQGNTIAQVGATAFAGFL-QNAVDYGGFQNGVANADVFYAGVSDDVAVRTTMGG-AVAFRDPNTNDSSDILDVIMNTEDWSNVFAIDSNQVYQSVDAGVTWTDITGNLMSIAGNAIQTIEYVSG----VLVVGGNLGVF 813
BLAST of mRNA_M-pyrifera_M_contig119856.4092.1 vs. uniprot
Match: A0A5C5X9F2_9PLAN (Cadherin domain-containing protein n=1 Tax=Rubinisphaera italica TaxID=2527969 RepID=A0A5C5X9F2_9PLAN) HSP 1 Score: 146 bits (369), Expect = 2.140e-37 Identity = 84/176 (47.73%), Postives = 117/176 (66.48%), Query Frame = 1
Query: 1 VSSGAPFAGAFRTPVELNNVNPQRLIIQGGNSTYESLNQGDTIAEVGAGVFNGSITQNAIEYGGNKGGVPNLDVLWVGSGSDVYFRSTAGPLAPTSSDPTTGT---IRDLAIDSDDWATAFIIDSNQVFTTTNEGASWTDITGNLLTMA-NDLRSIRFVAGPNIDAIVVGTNQGVF 516
V+SG+ F TPVELN ++P+R+II G N YESLNQG+TIA+VGA F G + QNA++YGG + GV N DV + G DV R+T G A DP T I D+ ++++DW+ F IDSNQV+ + + G +WTDITGNL+++A N +++I +V+G +VVG N GVF
Sbjct: 644 VTSGSALIPQFSTPVELNRIDPRRMIIHGANGLYESLNQGNTIAQVGATAFAGFL-QNAVDYGGFQNGVANADVFYAGVSDDVAVRTTMGG-AVAFRDPNTNDSSDILDVIMNTEDWSNVFAIDSNQVYQSVDAGVTWTDITGNLMSIAGNAIQTIEYVSG----VLVVGGNLGVF 813 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119856.4092.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig119856.4092.1 >prot_M-pyrifera_M_contig119856.4092.1 ID=prot_M-pyrifera_M_contig119856.4092.1|Name=mRNA_M-pyrifera_M_contig119856.4092.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=180bp VSSGAPFAGAFRTPVELNNVNPQRLIIQGGNSTYESLNQGDTIAEVGAGVback to top mRNA from alignment at M-pyrifera_M_contig119856:2..541+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig119856.4092.1 ID=mRNA_M-pyrifera_M_contig119856.4092.1|Name=mRNA_M-pyrifera_M_contig119856.4092.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=540bp|location=Sequence derived from alignment at M-pyrifera_M_contig119856:2..541+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig119856:2..541+ >mRNA_M-pyrifera_M_contig119856.4092.1 ID=mRNA_M-pyrifera_M_contig119856.4092.1|Name=mRNA_M-pyrifera_M_contig119856.4092.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1080bp|location=Sequence derived from alignment at M-pyrifera_M_contig119856:2..541+ (Macrocystis pyrifera P11B4 male)back to top |