mRNA_M-pyrifera_M_contig119670.4054.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig119670.4054.1
Unique NamemRNA_M-pyrifera_M_contig119670.4054.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig119670.4054.1 vs. uniprot
Match: A0A5J4XEQ6_9CHLO (RNA helicase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XEQ6_9CHLO)

HSP 1 Score: 279 bits (714), Expect = 2.810e-89
Identity = 134/180 (74.44%), Postives = 152/180 (84.44%), Query Frame = 1
Query:    1 LLNYVDTPVLDIHGKQKQQRRTATFFEFSKRKSGVLLCTDVAARGLDIPFVDWIIQYDPPDDPREYIHRVGRTARGATGKGKALLSLLPEEVGFLKYLRAAKVPLSEFVFPTSKLAAVQDDLERLVSTNYFLHNSAKDAYRSYLLSYASHALKHIFDVHALPLVQVAKSFGFSEAPRIDL 540
            LLNY+D PV DIHGKQKQQRRT  +F+F + + G+LLCTDVAARGLDIP VDWIIQYDPPDDP+EYIHRVGRTARG +GKG+ALL LLPEE+GFL YL+AAKVPL+E+ FPTSKLA VQ  LE+LV  NY+LH SAKDAYRSYLLSY SH LK IF+VHAL L  V KSFGF+  PR+ L
Sbjct:  294 LLNYIDIPVTDIHGKQKQQRRTTAYFDFCQAEKGILLCTDVAARGLDIPAVDWIIQYDPPDDPKEYIHRVGRTARGKSGKGRALLLLLPEELGFLSYLKAAKVPLNEYEFPTSKLANVQSQLEKLVEKNYYLHQSAKDAYRSYLLSYNSHQLKAIFNVHALDLAAVGKSFGFTRPPRVTL 473          
BLAST of mRNA_M-pyrifera_M_contig119670.4054.1 vs. uniprot
Match: A0A6S8JSP1_DUNTE (RNA helicase n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A6S8JSP1_DUNTE)

HSP 1 Score: 277 bits (709), Expect = 1.670e-88
Identity = 133/180 (73.89%), Postives = 154/180 (85.56%), Query Frame = 1
Query:    1 LLNYVDTPVLDIHGKQKQQRRTATFFEFSKRKSGVLLCTDVAARGLDIPFVDWIIQYDPPDDPREYIHRVGRTARGATGKGKALLSLLPEEVGFLKYLRAAKVPLSEFVFPTSKLAAVQDDLERLVSTNYFLHNSAKDAYRSYLLSYASHALKHIFDVHALPLVQVAKSFGFSEAPRIDL 540
            LLNY+D PV DIHGKQKQQ+RTATFFEF + + G+LLCTDVAARGLDIP VDWIIQYDPPDDP+EYIHRVGRTARG  G+G+ALL L+PEE+ FLKYL+ A+VPL+E+ FPT+K++ VQ  LERLV  NY+LH SAKDAYR+YLLSY SHALK IF+VH LPL  VAKSFGFS  PR+ L
Sbjct:  282 LLNYIDIPVKDIHGKQKQQKRTATFFEFCQAEKGILLCTDVAARGLDIPAVDWIIQYDPPDDPKEYIHRVGRTARGKEGRGRALLLLMPEELLFLKYLKEARVPLNEYEFPTNKVSNVQSQLERLVEKNYYLHQSAKDAYRAYLLSYNSHALKEIFNVHRLPLQAVAKSFGFSVPPRVTL 461          
BLAST of mRNA_M-pyrifera_M_contig119670.4054.1 vs. uniprot
Match: A0A5A8CXX8_CAFRO (RNA helicase n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CXX8_CAFRO)

HSP 1 Score: 285 bits (729), Expect = 3.320e-88
Identity = 137/180 (76.11%), Postives = 155/180 (86.11%), Query Frame = 1
Query:    1 LLNYVDTPVLDIHGKQKQQRRTATFFEFSKRKSGVLLCTDVAARGLDIPFVDWIIQYDPPDDPREYIHRVGRTARGATGKGKALLSLLPEEVGFLKYLRAAKVPLSEFVFPTSKLAAVQDDLERLVSTNYFLHNSAKDAYRSYLLSYASHALKHIFDVHALPLVQVAKSFGFSEAPRIDL 540
            LLNYVD P +DIHGK KQ RRT TFF+FSKR+SGVLLCTDVAARGLDIP+VDWIIQYDPPDDP+EYIHRVGRTARGATG GKALL LLPEE+GFLKYLRAAKV L+E+ FP  K+A VQ  LE LV  NY+L+ SAKDAYR+YL SY+SH+LKHIFDVH+L L  VAK FGF+  PR++L
Sbjct:  634 LLNYVDVPCMDIHGKMKQARRTTTFFDFSKRESGVLLCTDVAARGLDIPYVDWIIQYDPPDDPKEYIHRVGRTARGATGNGKALLFLLPEELGFLKYLRAAKVALNEYEFPDKKIARVQKSLEELVGKNYYLNKSAKDAYRAYLQSYSSHSLKHIFDVHSLDLAGVAKGFGFTVPPRVNL 813          
BLAST of mRNA_M-pyrifera_M_contig119670.4054.1 vs. uniprot
Match: A0A383VP26_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VP26_TETOB)

HSP 1 Score: 272 bits (696), Expect = 3.550e-88
Identity = 129/180 (71.67%), Postives = 152/180 (84.44%), Query Frame = 1
Query:    1 LLNYVDTPVLDIHGKQKQQRRTATFFEFSKRKSGVLLCTDVAARGLDIPFVDWIIQYDPPDDPREYIHRVGRTARGATGKGKALLSLLPEEVGFLKYLRAAKVPLSEFVFPTSKLAAVQDDLERLVSTNYFLHNSAKDAYRSYLLSYASHALKHIFDVHALPLVQVAKSFGFSEAPRIDL 540
            L NY+D PV DIHGKQKQ +RT+TFFEF   + G+LLCTDVAARGLDIP VDWIIQYDPPDDP+EYIHRVGRTARG  G+G+ALL L+PEE+GFLKYL+ AKVPL+E+ FP +KLA+VQ  LERLV  NY+LH SA+++YRSYLL+Y SHALK IF+VH L L  VAKSFGFS  PR++L
Sbjct:  159 LFNYIDIPVKDIHGKQKQAKRTSTFFEFCNAEKGILLCTDVAARGLDIPAVDWIIQYDPPDDPKEYIHRVGRTARGRDGRGRALLMLMPEELGFLKYLKQAKVPLNEYEFPLNKLASVQSQLERLVEKNYYLHQSARESYRSYLLAYNSHALKDIFNVHTLDLQAVAKSFGFSGPPRVNL 338          
BLAST of mRNA_M-pyrifera_M_contig119670.4054.1 vs. uniprot
Match: I0Z1U3_COCSC (RNA helicase n=2 Tax=Coccomyxa TaxID=41891 RepID=I0Z1U3_COCSC)

HSP 1 Score: 276 bits (705), Expect = 3.690e-88
Identity = 130/180 (72.22%), Postives = 152/180 (84.44%), Query Frame = 1
Query:    1 LLNYVDTPVLDIHGKQKQQRRTATFFEFSKRKSGVLLCTDVAARGLDIPFVDWIIQYDPPDDPREYIHRVGRTARGATGKGKALLSLLPEEVGFLKYLRAAKVPLSEFVFPTSKLAAVQDDLERLVSTNYFLHNSAKDAYRSYLLSYASHALKHIFDVHALPLVQVAKSFGFSEAPRIDL 540
            LLNY+D PV DIHGKQKQQRRT TF EF K + G+LLCTDVAARGLDIP VDWIIQYDPPDDP+EYIHRVGRTARG +G+G+ALL LLP+E+GFLKYL+ AKVPL+E+ FP SKLA VQ  LE+LV  N++LH SA+DAYRSYLL+Y SH LK  F+VH L L+ VAKSFGF++ PR+ L
Sbjct:  269 LLNYIDVPVKDIHGKQKQQRRTTTFLEFCKAEKGILLCTDVAARGLDIPAVDWIIQYDPPDDPKEYIHRVGRTARGRSGRGRALLMLLPQEIGFLKYLKEAKVPLNEYEFPQSKLANVQSQLEKLVEKNFYLHTSARDAYRSYLLAYNSHQLKSTFNVHTLDLLSVAKSFGFAQPPRVSL 448          
BLAST of mRNA_M-pyrifera_M_contig119670.4054.1 vs. uniprot
Match: A0A7S2RSI8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RSI8_9STRA)

HSP 1 Score: 268 bits (685), Expect = 4.050e-88
Identity = 127/180 (70.56%), Postives = 152/180 (84.44%), Query Frame = 1
Query:    1 LLNYVDTPVLDIHGKQKQQRRTATFFEFSKRKSGVLLCTDVAARGLDIPFVDWIIQYDPPDDPREYIHRVGRTARGATGKGKALLSLLPEEVGFLKYLRAAKVPLSEFVFPTSKLAAVQDDLERLVSTNYFLHNSAKDAYRSYLLSYASHALKHIFDVHALPLVQVAKSFGFSEAPRIDL 540
            LLNY+D PV+DIHGKQKQQ+RT TFF+F ++K G+LLCTDVAARGLDIP VDWIIQYDPPDDPREYIHRVGRTARG TG G+ALL LLPEEVGFLKYLR+AKV L+E+ F ++K+A VQ  L RL+  NY+L+ S ++A+RSYL+SYASH+LK IF+VH L L  V  +FGFS  PR+DL
Sbjct:   49 LLNYIDIPVMDIHGKQKQQKRTTTFFQFCRQKEGILLCTDVAARGLDIPSVDWIIQYDPPDDPREYIHRVGRTARGLTGAGRALLFLLPEEVGFLKYLRSAKVSLNEYEFQSNKIANVQSQLTRLIENNYYLNKSGREAFRSYLMSYASHSLKDIFNVHELDLEGVGVAFGFSVPPRVDL 228          
BLAST of mRNA_M-pyrifera_M_contig119670.4054.1 vs. uniprot
Match: A8I675_CHLRE (Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8I675_CHLRE)

HSP 1 Score: 273 bits (699), Expect = 5.260e-88
Identity = 132/180 (73.33%), Postives = 153/180 (85.00%), Query Frame = 1
Query:    1 LLNYVDTPVLDIHGKQKQQRRTATFFEFSKRKSGVLLCTDVAARGLDIPFVDWIIQYDPPDDPREYIHRVGRTARGATGKGKALLSLLPEEVGFLKYLRAAKVPLSEFVFPTSKLAAVQDDLERLVSTNYFLHNSAKDAYRSYLLSYASHALKHIFDVHALPLVQVAKSFGFSEAPRIDL 540
            LLNY+D PV DIHGKQKQQ+RT TFFEF + + G+LLCTDVAARGLDIP VDWIIQ+DPPDDPREYIHRVGRTARG  G+G+ALL LLPEE+GFLKYL+ AKVPL+E+ FPTSKLA VQ  LERLV  NY+LH SAKDA+RS LL+Y SH+LK IF+VH L L  +A+SFGFS  PR++L
Sbjct:  246 LLNYIDIPVKDIHGKQKQQKRTTTFFEFCQAEKGILLCTDVAARGLDIPAVDWIIQFDPPDDPREYIHRVGRTARGQAGRGRALLLLLPEELGFLKYLKDAKVPLNEYDFPTSKLANVQSQLERLVEKNYYLHQSAKDAFRSTLLAYNSHSLKEIFNVHRLDLQAMARSFGFSVPPRVNL 425          
BLAST of mRNA_M-pyrifera_M_contig119670.4054.1 vs. uniprot
Match: A0A3L6V1X2_9STRA (Helicase C-terminal domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6V1X2_9STRA)

HSP 1 Score: 268 bits (686), Expect = 8.580e-88
Identity = 130/180 (72.22%), Postives = 150/180 (83.33%), Query Frame = 1
Query:    1 LLNYVDTPVLDIHGKQKQQRRTATFFEFSKRKSGVLLCTDVAARGLDIPFVDWIIQYDPPDDPREYIHRVGRTARGATGKGKALLSLLPEEVGFLKYLRAAKVPLSEFVFPTSKLAAVQDDLERLVSTNYFLHNSAKDAYRSYLLSYASHALKHIFDVHALPLVQVAKSFGFSEAPRIDL 540
            LLNY+D PVLDIHGKQKQ +RT TFF+F   K+G+LLCTDVAARGLDIP VDWIIQ+DPPDDP+EYIHRVGRTARGATG GKALL LLPEE+GFLKYL+AAKV LSE+ FPT K+A V+  L +LV   Y+LH SAK+AYRSYLL+YASH LK+IFDV  L L  VAKSFG +  P++ L
Sbjct:   81 LLNYIDVPVLDIHGKQKQNKRTTTFFQFCGAKTGILLCTDVAARGLDIPAVDWIIQFDPPDDPKEYIHRVGRTARGATGSGKALLMLLPEELGFLKYLKAAKVGLSEYDFPTKKIAQVEAQLMKLVEKTYYLHKSAKEAYRSYLLAYASHGLKNIFDVGTLDLQAVAKSFGLTVPPKVTL 260          
BLAST of mRNA_M-pyrifera_M_contig119670.4054.1 vs. uniprot
Match: A0A7J7PZ65_9CHLO (RNA helicase n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PZ65_9CHLO)

HSP 1 Score: 276 bits (705), Expect = 6.790e-87
Identity = 131/180 (72.78%), Postives = 152/180 (84.44%), Query Frame = 1
Query:    1 LLNYVDTPVLDIHGKQKQQRRTATFFEFSKRKSGVLLCTDVAARGLDIPFVDWIIQYDPPDDPREYIHRVGRTARGATGKGKALLSLLPEEVGFLKYLRAAKVPLSEFVFPTSKLAAVQDDLERLVSTNYFLHNSAKDAYRSYLLSYASHALKHIFDVHALPLVQVAKSFGFSEAPRIDL 540
            L NY+D PV DIHGKQKQ +RT+TFFEF +   G+LLCTDVAARGLDIP VDWIIQYDPPDDP+EYIHRVGRTARG  G+G+ALL L+PEE+GFLKYL+ AKVPL+E+ FP SKLA+VQ  LERLV  NY+LH SA+DAYRSY+L+Y SHALK IF+VH L L  VAKSFGFS  PR++L
Sbjct:  385 LFNYIDIPVKDIHGKQKQAKRTSTFFEFCQADKGILLCTDVAARGLDIPAVDWIIQYDPPDDPKEYIHRVGRTARGRDGRGRALLMLMPEELGFLKYLKQAKVPLNEYEFPVSKLASVQSQLERLVEKNYYLHQSARDAYRSYILAYNSHALKEIFNVHTLDLQAVAKSFGFSGPPRVNL 564          
BLAST of mRNA_M-pyrifera_M_contig119670.4054.1 vs. uniprot
Match: A0A090N453_OSTTA (RNA helicase n=2 Tax=Ostreococcus TaxID=70447 RepID=A0A090N453_OSTTA)

HSP 1 Score: 274 bits (700), Expect = 9.680e-87
Identity = 128/180 (71.11%), Postives = 152/180 (84.44%), Query Frame = 1
Query:    1 LLNYVDTPVLDIHGKQKQQRRTATFFEFSKRKSGVLLCTDVAARGLDIPFVDWIIQYDPPDDPREYIHRVGRTARGATGKGKALLSLLPEEVGFLKYLRAAKVPLSEFVFPTSKLAAVQDDLERLVSTNYFLHNSAKDAYRSYLLSYASHALKHIFDVHALPLVQVAKSFGFSEAPRIDL 540
            LLNY+D PV DIHGKQKQQRRT TFFEF K + G+LLCTDVAARGLDIP VDWIIQYDPPDDP+EYIHRVGRTARG  GKG+ALL L+PEE+ FLKYL+AAKVPL+E+ FPT K+A VQ  LE+LV  NY+LH SA+DAYR+Y+L+Y SH LK +++VH+L LV VA SFGF + P++ L
Sbjct:  329 LLNYIDIPVSDIHGKQKQQRRTTTFFEFCKAERGILLCTDVAARGLDIPAVDWIIQYDPPDDPKEYIHRVGRTARGTDGKGRALLFLIPEELAFLKYLKAAKVPLNEYEFPTKKIANVQSQLEKLVEKNYYLHTSARDAYRAYILAYNSHTLKDVYNVHSLNLVAVASSFGFHKPPKVQL 508          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119670.4054.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5J4XEQ6_9CHLO2.810e-8974.44RNA helicase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608... [more]
A0A6S8JSP1_DUNTE1.670e-8873.89RNA helicase n=1 Tax=Dunaliella tertiolecta TaxID=... [more]
A0A5A8CXX8_CAFRO3.320e-8876.11RNA helicase n=2 Tax=Cafeteria roenbergensis TaxID... [more]
A0A383VP26_TETOB3.550e-8871.67Uncharacterized protein n=1 Tax=Tetradesmus obliqu... [more]
I0Z1U3_COCSC3.690e-8872.22RNA helicase n=2 Tax=Coccomyxa TaxID=41891 RepID=I... [more]
A0A7S2RSI8_9STRA4.050e-8870.56Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A8I675_CHLRE5.260e-8873.33Predicted protein (Fragment) n=1 Tax=Chlamydomonas... [more]
A0A3L6V1X2_9STRA8.580e-8872.22Helicase C-terminal domain-containing protein (Fra... [more]
A0A7J7PZ65_9CHLO6.790e-8772.78RNA helicase n=1 Tax=Scenedesmus sp. NREL 46B-D3 T... [more]
A0A090N453_OSTTA9.680e-8771.11RNA helicase n=2 Tax=Ostreococcus TaxID=70447 RepI... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig119670contigM-pyrifera_M_contig119670:2..541 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score276.9
Seed ortholog evalue6.5e-72
Seed eggNOG ortholog248742.XP_005649156.1
KEGG koko:K13179
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010501,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0031974,GO:0031981,GO:0034641,GO:0042623,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070035,GO:0071704,GO:0090304,GO:0140098,GO:1901360
EggNOG free text desc.helicase
EggNOG OGs34GZE@3041,37PD5@33090,COG0513@1,KOG0342@2759
EC3.6.4.13
COG Functional cat.A
Best tax levelChlorophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009,ko03041
Exons1
Model size540
Cds size540
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815716.3514526-CDS-M-pyrifera_M_contig119670:1..5411622815716.3514526-CDS-M-pyrifera_M_contig119670:1..541Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig119670 2..541 -
1692277535.842634-CDS-M-pyrifera_M_contig119670:1..5411692277535.842634-CDS-M-pyrifera_M_contig119670:1..541Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig119670 2..541 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig119670.4054.1prot_M-pyrifera_M_contig119670.4054.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig119670 2..541 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig119670.4054.1

>prot_M-pyrifera_M_contig119670.4054.1 ID=prot_M-pyrifera_M_contig119670.4054.1|Name=mRNA_M-pyrifera_M_contig119670.4054.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=180bp
LLNYVDTPVLDIHGKQKQQRRTATFFEFSKRKSGVLLCTDVAARGLDIPF
VDWIIQYDPPDDPREYIHRVGRTARGATGKGKALLSLLPEEVGFLKYLRA
AKVPLSEFVFPTSKLAAVQDDLERLVSTNYFLHNSAKDAYRSYLLSYASH
ALKHIFDVHALPLVQVAKSFGFSEAPRIDL
back to top

mRNA from alignment at M-pyrifera_M_contig119670:2..541-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig119670.4054.1 ID=mRNA_M-pyrifera_M_contig119670.4054.1|Name=mRNA_M-pyrifera_M_contig119670.4054.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=540bp|location=Sequence derived from alignment at M-pyrifera_M_contig119670:2..541- (Macrocystis pyrifera P11B4 male)
CTCCTCAACTACGTCGACACGCCAGTGCTCGACATCCACGGCAAGCAGAA GCAGCAGCGCAGAACCGCCACCTTTTTCGAGTTCTCCAAGCGGAAATCGG GAGTGCTTCTGTGCACCGATGTCGCAGCAAGAGGACTCGACATTCCTTTC GTCGACTGGATCATCCAGTACGACCCCCCAGATGATCCACGAGAGTACAT CCACCGCGTCGGAAGAACGGCGAGAGGCGCCACTGGCAAAGGAAAAGCGC TCCTCTCCCTCCTCCCAGAGGAAGTGGGCTTCCTCAAGTACCTCCGAGCC GCAAAAGTGCCTCTCTCCGAATTCGTCTTTCCCACCTCCAAGCTCGCAGC AGTGCAGGACGATTTGGAGCGGCTCGTCTCCACCAACTACTTCCTCCACA ACTCGGCCAAGGACGCCTACCGCTCCTACCTCCTCTCCTACGCCTCCCAT GCGCTCAAGCACATCTTCGACGTCCACGCGCTGCCACTCGTGCAGGTCGC AAAGTCCTTTGGCTTCTCAGAAGCACCTCGCATCGACCTC
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig119670:2..541-

>mRNA_M-pyrifera_M_contig119670.4054.1 ID=mRNA_M-pyrifera_M_contig119670.4054.1|Name=mRNA_M-pyrifera_M_contig119670.4054.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1080bp|location=Sequence derived from alignment at M-pyrifera_M_contig119670:2..541- (Macrocystis pyrifera P11B4 male)
CTCCTCAACTACGTCGACACGCCAGTGCTCGACATCCACGGCAAGCAGAA
GCAGCAGCGCAGAACCGCCACCTTTTTCGAGTTCTCCAAGCGGAAATCGG
GAGTGCTTCTGTGCACCGATGTCGCAGCAAGAGGACTCGACATTCCTTTC
GTCGACTGGATCATCCAGTACGACCCCCCAGATGATCCACGAGAGTACAT
CCACCGCGTCGGAAGAACGGCGAGAGGCGCCACTGGCAAAGGAAAAGCGC
TCCTCTCCCTCCTCCCAGAGGAAGTGGGCTTCCTCAAGTACCTCCGAGCC
GCAAAAGTGCCTCTCTCCGAATTCGTCTTTCCCACCTCCAAGCTCGCAGC
AGTGCAGGACGATTTGGAGCGGCTCGTCTCCACCAACTACTTCCTCCACA
ACTCGGCCAAGGACGCCTACCGCTCCTACCTCCTCTCCTACGCCTCCCAT
GCGCTCAAGCACATCTTCGACGTCCACGCGCTGCCACTCGTGCAGGTCGC
AAAGTCCTTTGGCTTCTCAGAAGCACCTCGCATCGACCTCCTCCTCAACT
ACGTCGACACGCCAGTGCTCGACATCCACGGCAAGCAGAAGCAGCAGCGC
AGAACCGCCACCTTTTTCGAGTTCTCCAAGCGGAAATCGGGAGTGCTTCT
GTGCACCGATGTCGCAGCAAGAGGACTCGACATTCCTTTCGTCGACTGGA
TCATCCAGTACGACCCCCCAGATGATCCACGAGAGTACATCCACCGCGTC
GGAAGAACGGCGAGAGGCGCCACTGGCAAAGGAAAAGCGCTCCTCTCCCT
CCTCCCAGAGGAAGTGGGCTTCCTCAAGTACCTCCGAGCCGCAAAAGTGC
CTCTCTCCGAATTCGTCTTTCCCACCTCCAAGCTCGCAGCAGTGCAGGAC
GATTTGGAGCGGCTCGTCTCCACCAACTACTTCCTCCACAACTCGGCCAA
GGACGCCTACCGCTCCTACCTCCTCTCCTACGCCTCCCATGCGCTCAAGC
ACATCTTCGACGTCCACGCGCTGCCACTCGTGCAGGTCGCAAAGTCCTTT
GGCTTCTCAGAAGCACCTCGCATCGACCTC
back to top