mRNA_M-pyrifera_M_contig119454.4018.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig119454.4018.1 vs. uniprot
Match: A0A2P6N8G9_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N8G9_9EUKA) HSP 1 Score: 104 bits (259), Expect = 1.270e-22 Identity = 57/171 (33.33%), Postives = 95/171 (55.56%), Query Frame = 1
Query: 25 FMHLSVLRSTKYSGILYCPYFAFKIQTMDIRVDELCLLRVLNFIDLITSFMATRQQEKKEQALFQVPSSFEVPEEDIATKSDLMLYFDMLHINPIQVNVSFLTVGGGADDLAGTSILEKTLRAGGFLANIESAPLRLNGLILEHPFCSQSELVGRIVQHYTVQALRETYKI 537
F S ++S KY + + YF+ +Q M+I ++E ++RV N++ A+ ++ ++ + + + + M+YF +LH+NPI NVSF+T+ G + T++ LANI+ APL LNGL LE+PF +Q +L+ +IV HYTVQ + + YKI
Sbjct: 2568 FAEFSAVKSNKYDRVDFYNYFSVLLQEMNINLEEEIVVRVFNYVTKARGIFASEKESADDRDRTAL----------LRSDTSKMIYFQLLHLNPILANVSFMTIPG-VEQKYNTNLSRAIGIPSRLLANIDHAPLELNGLALENPFDTQKDLLAKIVTHYTVQGIAQAYKI 2727
BLAST of mRNA_M-pyrifera_M_contig119454.4018.1 vs. uniprot
Match: A0A7S4NL83_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4NL83_9EUKA) HSP 1 Score: 102 bits (253), Expect = 2.210e-22 Identity = 65/191 (34.03%), Postives = 103/191 (53.93%), Query Frame = 1
Query: 19 QPFMHLSVLRST--KYSGILYCPYFAFKIQTMDIRVDELCLLRVLNF-IDLI-------------TSFMATRQQEKKEQALFQVPSSFEVPEEDIATKSDLMLYFDMLHINPIQVNVSFL-TVGGGADDLAGTSILEKTLRAGGFLANIESAPLRLNGLILEHPFCSQSELVGRIVQHYTVQALRETYKIL 540
+PF+H ++ST ++ I Y YF FK+ MDI+VDE+ LL+ LNF +D++ F+ R+Q ++Q Q S E ++ +D M+Y + +N + + +SFL T + A ++LE + G +N+E AP++LN LILE PFC S + ++QHY Q L E YKI+
Sbjct: 96 EPFLHFCAVKSTLKEHQEIDYYRYFGFKMSKMDIQVDEIFLLKTLNFYMDIMHFVSVSQGGEVTGDEFILNREQYLEKQLASQYYSQQEREKKIGGEINDSMVYVEWFQVNAVMIYISFLSTPWRERTEGADVNVLELMVHYMGSFSNLECAPIKLNALILERPFCPMSAIQSTVLQHYIRQGLTEWYKII 286
BLAST of mRNA_M-pyrifera_M_contig119454.4018.1 vs. uniprot
Match: VP13C_DICDI (Intermembrane lipid transfer protein tipC n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=VP13C_DICDI) HSP 1 Score: 95.1 bits (235), Expect = 2.100e-19 Identity = 57/179 (31.84%), Postives = 98/179 (54.75%), Query Frame = 1
Query: 19 QPFMHLSVLRSTKYSGILYCPYFAFKIQTMDIRVDELCLLRVLNFIDLITSFMATRQQEKKEQALFQVPSSFEVPEEDIATK-SDLMLYFDMLHINPIQVNVSFLTVGGGADD---LAGTSILEKTL--RAGGFLANIESAPLRLNGLILEHPFCSQSELVGRIVQHYTVQALRETYKI 537
+PF+ S R+ KYS I++ YF+ IQ DI +DE +L L+FI++ + + + L + E+ E A+ + M+YF+MLHINP+++N+SF++ + L S+ E + ++ NIE AP++ NG I EHPF S +++ I H++ Q + + +KI
Sbjct: 3347 KPFLQFSATRTLKYSNIMFFRYFSILIQEFDINLDEASILNALSFININLNSL------NEHFTLHPTITQEEILETKNASNIENHMVYFEMLHINPVKMNLSFISCKSPKETQAILGARSLAELLIGFKSNSPFLNIERAPIKFNGFIWEHPFLSTRQVIDEISLHFSYQMMSQAHKI 3519
BLAST of mRNA_M-pyrifera_M_contig119454.4018.1 vs. uniprot
Match: D3B105_POLPP (Uncharacterized protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B105_POLPP) HSP 1 Score: 94.4 bits (233), Expect = 3.880e-19 Identity = 56/181 (30.94%), Postives = 96/181 (53.04%), Query Frame = 1
Query: 19 QPFMHLSVLRSTKYSGILYCPYFAFKIQTMDIRVDELCLLRVLNFIDLITSFMA---TRQQEKKEQALFQVPSSFEVPEEDIATKSDLMLYFDMLHINPIQVNVSFLTVGGGADDLA-----GTSILEKTLRAGGFLANIESAPLRLNGLILEHPFCSQSELVGRIVQHYTVQALRETYKI 537
+PF S RS KY IL+ YF+F +Q D+ +DE +L L+FI++ + + T + + + QV S TK + M+YF++LHINP+++N+SF + + +A S L +++ N++ AP+ NG I EHPF S ++ +V H++ Q + + +KI
Sbjct: 2770 KPFFQFSSTRSLKYPKILFFRYFSFLVQEFDLNIDESSILNALSFININLNSLNQHFTMHKTITSEEILQVES----------TKLENMIYFELLHINPLKINLSFTSCKLPKEVVAVLGARSLSDLLLGIKSSSPFLNVDRAPMHFNGFIWEHPFLSVKQVTDEMVLHFSYQLMGQVHKI 2940
BLAST of mRNA_M-pyrifera_M_contig119454.4018.1 vs. uniprot
Match: F1A2C1_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F1A2C1_DICPU) HSP 1 Score: 94.0 bits (232), Expect = 5.290e-19 Identity = 58/178 (32.58%), Postives = 95/178 (53.37%), Query Frame = 1
Query: 22 PFMHLSVLRSTKYSGILYCPYFAFKIQTMDIRVDELCLLRVLNFIDLITSFMATRQQEKKEQALFQVPSSFEVPE-EDIATKSDLMLYFDMLHINPIQVNVSFLTVGGGADD---LAGTSILEKTL--RAGGFLANIESAPLRLNGLILEHPFCSQSELVGRIVQHYTVQALRETYKI 537
PF+ LS R KY I++ YF IQ DI +DE +L L+FI++ + + + L + E+ E ++ A + M+YF+MLHI PI+VN+SF++ + L S+ E + ++ NIE AP++ NG I EHPF S +++ I H++ Q + + +KI
Sbjct: 3008 PFLQLSATRCIKYQNIIFFRYFTVLIQEFDINLDESSILNALSFININLNSL------NEHFTLHPTITQEEILETKNAANIQNHMIYFEMLHIQPIKVNLSFVSCKSPKETQAILGARSLAELLIGFKSNSPFLNIERAPIKFNGFIWEHPFLSTGQVIDEITLHFSYQLMSQAHKI 3179
BLAST of mRNA_M-pyrifera_M_contig119454.4018.1 vs. uniprot
Match: F4PJK8_CAVFA (Uncharacterized protein tipC n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PJK8_CAVFA) HSP 1 Score: 93.6 bits (231), Expect = 7.200e-19 Identity = 60/184 (32.61%), Postives = 96/184 (52.17%), Query Frame = 1
Query: 1 SPKVEGQPFMHLSVLRSTKYSGILYCPYFAFKIQTMDIRVDELCLLRVLNFIDLITSFMATRQQEKKEQALFQVPSSFEVPEEDIATKSDLMLYFDMLHINPIQVNVSFLT--VGGGADDLAGTSILEKTL---RAGGFLANIESAPLRLNGLILEHPFCSQSELVGRIVQHYTVQALRETYKI 537
S V +PF S RS KY IL+ YF+F +Q D+ +DE +L L+FI++ + + Q K + Q + +K + M+YF+MLHINP++VN+SF + + + G L + L ++ NIE AP++ NG I EHPF S ++ I H++ Q + + +KI
Sbjct: 3064 SSTVAVKPFFQFSSTRSLKYPNILFFRYFSFLVQEFDLNIDESSVLNALSFINI--NLNSLNQHFKLHPTITQEEILQSATDN---SKLENMVYFEMLHINPLKVNLSFTSSKLPKEISAVLGARSLSELLLGIKSSSPFLNIEHAPIKFNGFIWEHPFLSIKQVTDEITLHFSYQMMGQIHKI 3242
BLAST of mRNA_M-pyrifera_M_contig119454.4018.1 vs. uniprot
Match: A0A2P6NQL0_9EUKA (Vacuolar protein sorting-associated protein 13 family protein (Fragment) n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NQL0_9EUKA) HSP 1 Score: 93.2 bits (230), Expect = 9.610e-19 Identity = 60/189 (31.75%), Postives = 101/189 (53.44%), Query Frame = 1
Query: 25 FMHLSVLRSTKYSGILYCPYFAFKIQTMDIRVDELCLLRVLNFIDLITSFMATRQQEKKEQALFQVPSSF--EVPEEDIATKSDLMLYFDMLHINPIQVNVSFLTVGGGADDLAG--------------TSILEKTLRAGGF-LANIESAPLRLNGLILEHPFCSQSELVGRIVQHYTVQALRETYKIL 540
FMH+S+++S KY+ I + YF+ Q + I+++E L + N + + T Q + E+ L + + + +YF +LH NPI+VN+S+ GG + G SIL+ + A G LAN++ A + LNGL LEHPF ++ +L+ R+ +HY++QA+RE YK++
Sbjct: 1713 FMHMSLVKSKKYTSIDFFQYFSILFQEVSIKLEENFLTCLFNLASSVQTKRVTEQSGELEKYLTGNDTLLWNRNRGNKLTPYGEKKMYFQILHFNPIKVNLSY--AGGNTNYGVGHQKGSHSNQPHNLPNSILKTIMNAVGVTLANLDGACITLNGLFLEHPFSTREQLLNRMSKHYSMQAVRELYKVV 1899
BLAST of mRNA_M-pyrifera_M_contig119454.4018.1 vs. uniprot
Match: A0A8J4Q1W5_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4Q1W5_9MYCE) HSP 1 Score: 93.2 bits (230), Expect = 9.790e-19 Identity = 58/181 (32.04%), Postives = 99/181 (54.70%), Query Frame = 1
Query: 19 QPFMHLSVLRSTKYSGILYCPYFAFKIQTMDIRVDELCLLRVLNFIDL-ITSFMA--TRQQEKKEQALFQVPSSFEVPEEDIATKSDLMLYFDMLHINPIQVNVSFLTVGGG--ADDLAGTSILEKTL---RAGGFLANIESAPLRLNGLILEHPFCSQSELVGRIVQHYTVQALRETYKI 537
+PF+ S RS KY I++ YF+ IQ D+ +DE +L L+FI++ +TS T ++ + Q ++ + S+ ++YF+MLHINP++VN+SF++ A + G L + L ++ NIE AP++ NG I EHPF S +++ I H++ Q + + +KI
Sbjct: 2958 KPFIQFSATRSFKYPKIIFFRYFSLLIQECDVNIDESSILNALSFINVNLTSLNEHFTLNPTITQEEILQTKNASNI--------SNHLIYFEMLHINPLKVNLSFVSCKSPKEAQAILGARSLAELLIGFKSNSPFLNIERAPIKCNGFIWEHPFLSTKQVLDEISLHFSYQLMGQVHKI 3130
BLAST of mRNA_M-pyrifera_M_contig119454.4018.1 vs. uniprot
Match: A0A151Z498_9MYCE (Uncharacterized protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z498_9MYCE) HSP 1 Score: 89.4 bits (220), Expect = 2.130e-17 Identity = 53/178 (29.78%), Postives = 98/178 (55.06%), Query Frame = 1
Query: 22 PFMHLSVLRSTKYSGILYCPYFAFKIQTMDIRVDELCLLRVLNFIDLITSFMATRQQEKKEQALFQVPSSFEVPE-EDIATKSDLMLYFDMLHINPIQVNVSFLTVGGGADD---LAGTSILEKTL--RAGGFLANIESAPLRLNGLILEHPFCSQSELVGRIVQHYTVQALRETYKI 537
PF+ S RS KY I++ Y + +Q D+ +DE +L L+FI++ S + + L ++ E+ + ++++ S M+YF+MLHINP++VN+SF++ + L S+ E + ++ NI+ AP++ NG I HPF S +++ I+ H++ Q + + +KI
Sbjct: 2846 PFIQFSSTRSLKYKNIMFFRYLSILVQEFDLSLDESSILNALSFININLSSL------NEHLTLHPTITTEEILQTKNVSNISYHMVYFEMLHINPLKVNLSFVSCKSPKEVQAILGARSLAELLIGFKSNSPFLNIDRAPIKFNGFIWAHPFLSSKQVIDEIILHFSYQLMGQAHKI 3017
BLAST of mRNA_M-pyrifera_M_contig119454.4018.1 vs. uniprot
Match: A0A7S4JFQ1_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4JFQ1_GUITH) HSP 1 Score: 87.0 bits (214), Expect = 1.290e-16 Identity = 59/192 (30.73%), Postives = 101/192 (52.60%), Query Frame = 1
Query: 7 KVEGQPFMHLSVLRSTKYSGILYCPYFAFKIQTMDIRVDELCLLRVL----NFIDLITSFMATRQQEKKEQALFQVPSSFEVPEEDIATKSDLMLYFDMLHINPIQVNVSFL----------TVGGGADDLAGTSILEKTLRAGGFLANIESAPLRLNGLILEHPFCSQSELVGRIVQHYTVQALRETYKIL 540
K EG+P +H+S++RS Y I + YFAF ++ M + ++E ++R+L N +D T ++ + + + F+ E +E I + +YF++L ++PI VN+SF T GGG L+ + G + NI+ AP+ LN L+LE PF + EL I +HY Q +++ YK++
Sbjct: 1151 KGEGKPAIHVSMVRSRVYKNISFFKYFAFSLREMSLDLEETIIMRLLDAAQNVVDSSTISVSDEKPDDLRASGFKNLRFLE--KEAIGGEK---MYFELLQLHPIVVNLSFYGTGALMDRASTEGGG---LSYNPMFAAMKALGVVVTNIDKAPICLNALVLERPFATSQELSSSIRKHYRTQLIQQLYKLV 1334 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119454.4018.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig119454.4018.1 >prot_M-pyrifera_M_contig119454.4018.1 ID=prot_M-pyrifera_M_contig119454.4018.1|Name=mRNA_M-pyrifera_M_contig119454.4018.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=171bp MHLSVLRSTKYSGILYCPYFAFKIQTMDIRVDELCLLRVLNFIDLITSFMback to top mRNA from alignment at M-pyrifera_M_contig119454:4..543+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig119454.4018.1 ID=mRNA_M-pyrifera_M_contig119454.4018.1|Name=mRNA_M-pyrifera_M_contig119454.4018.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=540bp|location=Sequence derived from alignment at M-pyrifera_M_contig119454:4..543+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig119454:4..543+ >mRNA_M-pyrifera_M_contig119454.4018.1 ID=mRNA_M-pyrifera_M_contig119454.4018.1|Name=mRNA_M-pyrifera_M_contig119454.4018.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1026bp|location=Sequence derived from alignment at M-pyrifera_M_contig119454:4..543+ (Macrocystis pyrifera P11B4 male)back to top |