mRNA_M-pyrifera_M_contig119365.3997.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig119365.3997.1
Unique NamemRNA_M-pyrifera_M_contig119365.3997.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig119365.3997.1 vs. uniprot
Match: A0A518A5T0_9PLAN (Lipopolysaccharide heptosyltransferase 1 n=10 Tax=Gimesia TaxID=1649453 RepID=A0A518A5T0_9PLAN)

HSP 1 Score: 341 bits (875), Expect = 1.240e-115
Identity = 163/181 (90.06%), Postives = 171/181 (94.48%), Query Frame = 1
Query:    1 RTGIMTAATRAPWRVGIEAAREGSHLTCNLTIPDTGRYVPAWLKYWRVADAFGQGNLKRTTDIYLSEDDQNWAQKKLYCPEYPLPTLAIHAGAQWITKRWPPESFAAVGAKAIRRFRCQVVLVGTSAERELTGHIEKLLQKFVPTGRVINLAGETTLKQLAAVLQQSDFVLTNDSGPMHLA 543
            RTGIMTAATRAPWR+GIEAAREGS  TCNLT+PDTGRYVPAWLKYWRVADAFGQG L+R T+IYLS  D+NWA  KL+ PEYPLPTLAIHAGAQWITKRWPPESFAAVGAKAIRRFRCQ+VLVGTSAERELTGHIEKLL KFVPTGRVINLAGET+LKQLAAVLQQSDFVLTNDSGPMHLA
Sbjct:  104 RTGIMTAATRAPWRIGIEAAREGSRFTCNLTVPDTGRYVPAWLKYWRVADAFGQGELERKTEIYLSPGDRNWALDKLHSPEYPLPTLAIHAGAQWITKRWPPESFAAVGAKAIRRFRCQIVLVGTSAERELTGHIEKLLHKFVPTGRVINLAGETSLKQLAAVLQQSDFVLTNDSGPMHLA 284          
BLAST of mRNA_M-pyrifera_M_contig119365.3997.1 vs. uniprot
Match: A0A518IBW4_9PLAN (Lipopolysaccharide heptosyltransferase 1 n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518IBW4_9PLAN)

HSP 1 Score: 291 bits (744), Expect = 9.290e-96
Identity = 142/181 (78.45%), Postives = 155/181 (85.64%), Query Frame = 1
Query:    1 RTGIMTAATRAPWRVGIEAAREGSHLTCNLTIPDTGRYVPAWLKYWRVADAFGQGNLKRTTDIYLSEDDQNWAQKKLYCPEYPLPTLAIHAGAQWITKRWPPESFAAVGAKAIRRFRCQVVLVGTSAERELTGHIEKLLQKFVPTGRVINLAGETTLKQLAAVLQQSDFVLTNDSGPMHLA 543
            RTGIMT ATRAPWR+GIEAAREGSHL  NLTIPDTGR VPA+LKYWRVADA G G  +R TDI LS++D NWA+ KL   E   PTLAIHAGAQWITKRWPPESFAAVGAKAIR FRC +VLVGT+ ER LT HI++LL KFVPTG V+NLAGETTLKQLAAVL +SDF+LTNDSGPMHLA
Sbjct:  104 RTGIMTTATRAPWRIGIEAAREGSHLAYNLTIPDTGRLVPAYLKYWRVADALGLGETQRQTDIALSKEDMNWAKSKLTPQENRTPTLAIHAGAQWITKRWPPESFAAVGAKAIRHFRCNIVLVGTADERPLTNHIQQLLHKFVPTGNVLNLAGETTLKQLAAVLIESDFLLTNDSGPMHLA 284          
BLAST of mRNA_M-pyrifera_M_contig119365.3997.1 vs. uniprot
Match: A0A517VY21_9PLAN (Lipopolysaccharide core heptosyltransferase RfaQ n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VY21_9PLAN)

HSP 1 Score: 280 bits (715), Expect = 2.300e-91
Identity = 138/181 (76.24%), Postives = 152/181 (83.98%), Query Frame = 1
Query:    1 RTGIMTAATRAPWRVGIEAAREGSHLTCNLTIPDTGRYVPAWLKYWRVADAFGQGNLKRTTDIYLSEDDQNWAQKKLYCPEYPLPTLAIHAGAQWITKRWPPESFAAVGAKAIRRFRCQVVLVGTSAERELTGHIEKLLQKFVPTGRVINLAGETTLKQLAAVLQQSDFVLTNDSGPMHLA 543
            RTGIMTA+T APWR+GIEAAREGSHL  NLTIPDTGR VPA+LKYWRVADA G G  +R T + LS +D  WA+ KL      +P LAIHAGAQWITKRWPPESFAAVGAKAIRRFRC VVLVGT+ ER LT  I++LL KFVPTGR+INLAGETTLKQLAAVL +SDF+LTNDSGPMHLA
Sbjct:  104 RTGIMTASTCAPWRIGIEAAREGSHLAYNLTIPDTGRLVPAYLKYWRVADALGFGETQRQTGLILSNEDTTWAKSKLDRKNNLVPILAIHAGAQWITKRWPPESFAAVGAKAIRRFRCNVVLVGTADERPLTSQIQQLLHKFVPTGRIINLAGETTLKQLAAVLTESDFLLTNDSGPMHLA 284          
BLAST of mRNA_M-pyrifera_M_contig119365.3997.1 vs. uniprot
Match: A0A517V8K5_9PLAN (Lipopolysaccharide core heptosyltransferase RfaQ n=10 Tax=Planctomycetaceae TaxID=126 RepID=A0A517V8K5_9PLAN)

HSP 1 Score: 276 bits (705), Expect = 7.740e-90
Identity = 132/181 (72.93%), Postives = 151/181 (83.43%), Query Frame = 1
Query:    1 RTGIMTAATRAPWRVGIEAAREGSHLTCNLTIPDTGRYVPAWLKYWRVADAFGQGNLKRTTDIYLSEDDQNWAQKKLYCPEYPLPTLAIHAGAQWITKRWPPESFAAVGAKAIRRFRCQVVLVGTSAERELTGHIEKLLQKFVPTGRVINLAGETTLKQLAAVLQQSDFVLTNDSGPMHLA 543
            RTG+MTAATRA WR+GIEAAREGSHL  N+TIP+T R +PA+ KYW VADAFG G   R T I +S++D+ WA+K L   E   PTLAIHAGAQWITKRWPPESFAAVGAKAIR FRC +VLVGT+ ER LT  IEKLL KFVPTGRV+NLAG+TTLKQLAAVL ++D++LTNDSGPMHLA
Sbjct:  105 RTGVMTAATRARWRIGIEAAREGSHLAYNMTIPETSRSIPAYQKYWNVADAFGSGEKSRETSISISDEDKAWARKTLSAGEKSCPTLAIHAGAQWITKRWPPESFAAVGAKAIRHFRCNIVLVGTADERPLTSQIEKLLHKFVPTGRVLNLAGQTTLKQLAAVLMETDYLLTNDSGPMHLA 285          
BLAST of mRNA_M-pyrifera_M_contig119365.3997.1 vs. uniprot
Match: A0A2E2C9X0_9PLAN (Heptosyltransferase n=3 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2C9X0_9PLAN)

HSP 1 Score: 265 bits (677), Expect = 2.750e-85
Identity = 127/181 (70.17%), Postives = 149/181 (82.32%), Query Frame = 1
Query:    1 RTGIMTAATRAPWRVGIEAAREGSHLTCNLTIPDTGRYVPAWLKYWRVADAFGQGNLKRTTDIYLSEDDQNWAQKKLYCPEYPLPTLAIHAGAQWITKRWPPESFAAVGAKAIRRFRCQVVLVGTSAERELTGHIEKLLQKFVPTGRVINLAGETTLKQLAAVLQQSDFVLTNDSGPMHLA 543
            RTG+MTAATRAPWR+G+E++REGSHL  NLTIP+T R VPA+ KYW VADAFG     R T I++S+ D+ WA+  L       PTLAIHAGAQWITKRWPPESFAAVGAKAIR FRC +VLVGT+ ER LT  IEKLL KFVPTGRV+NLAG+TTLKQLAA+L +++++LTNDSGPMHLA
Sbjct:  129 RTGVMTAATRAPWRIGMESSREGSHLAYNLTIPETSRTVPAYQKYWNVADAFGTEETGRDTQIFISDADKAWARDILSAGAKSCPTLAIHAGAQWITKRWPPESFAAVGAKAIRHFRCNIVLVGTTDERPLTSQIEKLLHKFVPTGRVLNLAGQTTLKQLAALLMETNYLLTNDSGPMHLA 309          
BLAST of mRNA_M-pyrifera_M_contig119365.3997.1 vs. uniprot
Match: A0A2D6SV28_9PLAN (Heptosyltransferase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2D6SV28_9PLAN)

HSP 1 Score: 205 bits (522), Expect = 2.660e-62
Identity = 100/181 (55.25%), Postives = 133/181 (73.48%), Query Frame = 1
Query:    1 RTGIMTAATRAPWRVGIEAAREGSHLTCNLTIPDTGRYVPAWLKYWRVADAFGQGNLKRTTDIYLSEDDQNWAQKKLYCPEYPLPTLAIHAGAQWITKRWPPESFAAVGAKAIRRFRCQVVLVGTSAERELTGHIEKLLQKFVPTGRVINLAGETTLKQLAAVLQQSDFVLTNDSGPMHLA 543
            RTG+MT ATRAP R+G+++AREG+HLTC+ TIPD+GR VPA  +YWRVA+A G G+L+  T+I ++ +D+NWA  ++         LAIHAGA+W TKRWP E FA V  KAIR +   VVL+G++AE+ L   +E L+ +FVP    +NL G T+LKQLAAVL  ++ VLTNDSGPMH+A
Sbjct:  102 RTGLMTLATRAPLRIGLQSAREGAHLTCHHTIPDSGRLVPAHRRYWRVAEALGLGDLQAETEIPMAAEDRNWAATQM--ARVGPRILAIHAGARWQTKRWPVEKFAVVACKAIRLYGYSVVLLGSAAEQPLARQLETLINRFVPAQHALNLTGRTSLKQLAAVLSSAEAVLTNDSGPMHMA 280          
BLAST of mRNA_M-pyrifera_M_contig119365.3997.1 vs. uniprot
Match: UPI0019B9991B (Lipopolysaccharide heptosyltransferase II n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=UPI0019B9991B)

HSP 1 Score: 186 bits (472), Expect = 8.950e-55
Identity = 90/181 (49.72%), Postives = 125/181 (69.06%), Query Frame = 1
Query:    1 RTGIMTAATRAPWRVGIEAAREGSHLTCNLTIPDTGRYVPAWLKYWRVADAFGQGNLKRTTDIYLSEDDQNWAQKKLYCPEYPLPTLAIHAGAQWITKRWPPESFAAVGAKAIRRFRCQVVLVGTSAERELTGHIEKLLQKFVPTGRVINLAGETTLKQLAAVLQQSDFVLTNDSGPMHLA 543
            R+G+M AAT AP RVG+E +REG+   C+LTIP TG+ +PA+ +YWR+A+  G G+ +  T ++ ++ D+ WA  +L+    P+  LAIH GA+W+TKRWP E FA V  KA+R++   VV++G+  E  +   ++ LLQ FV    V+NL G+TTLKQL AVL   D VLTNDSGPMHLA
Sbjct:  104 RSGLMAAATGAPLRVGLETSREGAGFACHLTIPQTGKGMPAFQRYWRIAEELGFGDRQPQTIVHTADSDRAWATSELHALSGPI--LAIHPGARWMTKRWPVEKFAVVANKAMRQYGFSVVILGSKGEMPVANELQTLLQGFVSRKTVLNLTGKTTLKQLTAVLSSVDVVLTNDSGPMHLA 282          
BLAST of mRNA_M-pyrifera_M_contig119365.3997.1 vs. uniprot
Match: A0A2E7D003_9PLAN (Heptosyltransferase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7D003_9PLAN)

HSP 1 Score: 182 bits (463), Expect = 1.890e-53
Identity = 92/181 (50.83%), Postives = 123/181 (67.96%), Query Frame = 1
Query:    1 RTGIMTAATRAPWRVGIEAAREGSHLTCNLTIPDTGRYVPAWLKYWRVADAFGQGNLKRTTDIYLSEDDQNWAQKKLYCPEYPLPTLAIHAGAQWITKRWPPESFAAVGAKAIRRFRCQVVLVGTSAERELTGHIEKLLQKFVPTGRVINLAGETTLKQLAAVLQQSDFVLTNDSGPMHLA 543
            RTGIMTAAT A  RVG++ AREG+HL  N+TIP+TGR +PA  +YWR A+A G G  +R T I +S+ D NWA+ +L   +     L IH GA W TKRWP E +A VG K +R +   VV++G+  E EL   +E L  +FVP+  ++NL+G+T+LKQL+ +L   D + TNDSGPMHLA
Sbjct:  102 RTGIMTAATGAQVRVGLQTAREGAHLASNVTIPNTGRDIPAHQRYWRGAEALGLGESRRQTLIRISKQDSNWAEGQL--SQLKGMVLGIHPGAGWTTKRWPIEKYAVVGCKFMRMYGGSVVILGSPDEAELGEQLEALFNRFVPSKPILNLSGKTSLKQLSTMLSAVDLLATNDSGPMHLA 280          
BLAST of mRNA_M-pyrifera_M_contig119365.3997.1 vs. uniprot
Match: A0A3B8L042_9PLAN (Heptosyltransferase n=3 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3B8L042_9PLAN)

HSP 1 Score: 181 bits (459), Expect = 8.310e-53
Identity = 93/181 (51.38%), Postives = 123/181 (67.96%), Query Frame = 1
Query:    1 RTGIMTAATRAPWRVGIEAAREGSHLTCNLTIPDTGRYVPAWLKYWRVADAFGQGNLKRTTDIYLSEDDQNWAQKKLYCPEYPLPTLAIHAGAQWITKRWPPESFAAVGAKAIRRFRCQVVLVGTSAERELTGHIEKLLQKFVPTGRVINLAGETTLKQLAAVLQQSDFVLTNDSGPMHLA 543
            RTG+MT +TRAP R+G+E AREG+   C+  + DTGR VPA+ +YWRVA+  GQG+L  T DI +   D+ WA   +   +     +A+HAGA+W+TKRWP E FAAVGA AI      +VLVG+S ER     +++L+    P GR+ NLAG+T LK+LAA+L   D V+TNDSGPMHLA
Sbjct:  104 RTGLMTVSTRAPVRIGLETAREGAGWACHGLLEDTGRQVPAFRRYWRVAEFLGQGHLAPTADIAVPTSDRGWADVTVR--QLGGRVVALHAGARWMTKRWPLEHFAAVGAHAIHEHGAALVLVGSSDERLEAARLKELIVGHAPAGRIENLAGQTGLKKLAALLGAVDTVVTNDSGPMHLA 282          
BLAST of mRNA_M-pyrifera_M_contig119365.3997.1 vs. uniprot
Match: A0A517ZSL7_9PLAN (ADP-heptose--LPS heptosyltransferase 2 n=3 Tax=Symmachiella TaxID=2795780 RepID=A0A517ZSL7_9PLAN)

HSP 1 Score: 180 bits (456), Expect = 2.060e-52
Identity = 93/182 (51.10%), Postives = 121/182 (66.48%), Query Frame = 1
Query:    1 RTGIMTAATRAPWRVGIEAAREGSHLTCNLTIPDTGRYVPAWLKYWRVADAFGQGNLKRTTDIYLSEDDQNWAQKKLYCPEYPLPTLAIHAGAQWITKRWPPESFAAVGAKAIRRFRCQVVLVGTSAERELTGHIEKLLQKFVPTGR-VINLAGETTLKQLAAVLQQSDFVLTNDSGPMHLA 543
            RTG+M AATRAP R+G+E AREG+ L CN+TIPDTGR +PA  +YWRVA+AFG G+  R   + LS+ D + A + L     P P +AIH GA+W+TKRWP E FA V   A+      +V++G+  E  L   +E  +     T   V NLAG+T+LK+LAAVLQ  D V++NDSGPMHLA
Sbjct:  100 RTGVMCAATRAPIRIGLETAREGAGLACNITIPDTGRLMPAHARYWRVAEAFGVGDASRQLQLSLSDADISAAARLL--GGLPRPLIAIHPGARWVTKRWPTEKFAEVACAAMSENAAGIVVLGSGDEASLAADVESRIVAATGTANNVRNLAGQTSLKELAAVLQSVDMVVSNDSGPMHLA 279          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119365.3997.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A518A5T0_9PLAN1.240e-11590.06Lipopolysaccharide heptosyltransferase 1 n=10 Tax=... [more]
A0A518IBW4_9PLAN9.290e-9678.45Lipopolysaccharide heptosyltransferase 1 n=2 Tax=G... [more]
A0A517VY21_9PLAN2.300e-9176.24Lipopolysaccharide core heptosyltransferase RfaQ n... [more]
A0A517V8K5_9PLAN7.740e-9072.93Lipopolysaccharide core heptosyltransferase RfaQ n... [more]
A0A2E2C9X0_9PLAN2.750e-8570.17Heptosyltransferase n=3 Tax=Planctomycetaceae TaxI... [more]
A0A2D6SV28_9PLAN2.660e-6255.25Heptosyltransferase n=1 Tax=Planctomycetaceae bact... [more]
UPI0019B9991B8.950e-5549.72Lipopolysaccharide heptosyltransferase II n=1 Tax=... [more]
A0A2E7D003_9PLAN1.890e-5350.83Heptosyltransferase n=1 Tax=Planctomycetaceae bact... [more]
A0A3B8L042_9PLAN8.310e-5351.38Heptosyltransferase n=3 Tax=Planctomycetaceae bact... [more]
A0A517ZSL7_9PLAN2.060e-5251.10ADP-heptose--LPS heptosyltransferase 2 n=3 Tax=Sym... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig119365contigM-pyrifera_M_contig119365:3..545 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score263.1
Seed ortholog evalue9.5e-68
Seed eggNOG ortholog344747.PM8797T_31805
Preferred namerfaF
KEGG rclassRC00009,RC00077,RC00247
KEGG koko:K02527,ko:K02841,ko:K02843,ko:K12982
KEGG ReactionR04658,R05074,R09763
KEGG Pathwayko00540,ko01100,map00540,map01100
KEGG ModuleM00060,M00080
Hectar predicted targeting categoryother localisation
EggNOG free text desc.COG0859 ADP-heptose LPS heptosyltransferase
EggNOG OGs2IYZS@203682,COG0859@1,COG0859@2
EC2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15
COG Functional cat.M
CAZyGT30,GT9
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01003,ko01005
Exons1
Model size543
Cds size531
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815713.5748117-UTR-M-pyrifera_M_contig119365:2..141622815713.5748117-UTR-M-pyrifera_M_contig119365:2..14Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig119365 3..14 +
1692277534.6496391-UTR-M-pyrifera_M_contig119365:2..141692277534.6496391-UTR-M-pyrifera_M_contig119365:2..14Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig119365 3..14 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815713.5852883-CDS-M-pyrifera_M_contig119365:14..5451622815713.5852883-CDS-M-pyrifera_M_contig119365:14..545Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig119365 15..545 +
1692277534.6624463-CDS-M-pyrifera_M_contig119365:14..5451692277534.6624463-CDS-M-pyrifera_M_contig119365:14..545Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig119365 15..545 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig119365.3997.1prot_M-pyrifera_M_contig119365.3997.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig119365 15..545 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig119365.3997.1

>prot_M-pyrifera_M_contig119365.3997.1 ID=prot_M-pyrifera_M_contig119365.3997.1|Name=mRNA_M-pyrifera_M_contig119365.3997.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=177bp
MTAATRAPWRVGIEAAREGSHLTCNLTIPDTGRYVPAWLKYWRVADAFGQ
GNLKRTTDIYLSEDDQNWAQKKLYCPEYPLPTLAIHAGAQWITKRWPPES
FAAVGAKAIRRFRCQVVLVGTSAERELTGHIEKLLQKFVPTGRVINLAGE
TTLKQLAAVLQQSDFVLTNDSGPMHLA
back to top

mRNA from alignment at M-pyrifera_M_contig119365:3..545+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig119365.3997.1 ID=mRNA_M-pyrifera_M_contig119365.3997.1|Name=mRNA_M-pyrifera_M_contig119365.3997.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=543bp|location=Sequence derived from alignment at M-pyrifera_M_contig119365:3..545+ (Macrocystis pyrifera P11B4 male)
CGTACCGGCATCATGACTGCCGCCACCCGCGCTCCCTGGCGGGTCGGCAT CGAAGCAGCTCGCGAAGGTTCGCACCTCACCTGTAACCTGACGATCCCCG ACACGGGACGCTATGTTCCAGCCTGGCTCAAATACTGGCGCGTCGCTGAT GCCTTTGGACAGGGAAATCTGAAACGCACGACTGACATCTATCTCTCCGA AGACGACCAGAACTGGGCACAGAAAAAACTGTATTGCCCCGAGTATCCGC TGCCGACTCTCGCGATTCACGCGGGCGCGCAATGGATCACCAAACGCTGG CCCCCCGAAAGCTTCGCTGCGGTCGGTGCCAAAGCCATCCGTCGCTTCCG TTGCCAGGTTGTCCTGGTGGGAACTTCTGCAGAAAGAGAACTGACCGGCC ATATCGAAAAACTGCTGCAAAAGTTCGTTCCGACCGGCAGGGTCATCAAT CTGGCAGGGGAAACAACGCTCAAACAACTCGCCGCGGTTTTACAGCAATC CGACTTTGTCCTCACCAATGATTCCGGCCCCATGCACCTGGCC
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig119365:3..545+

>mRNA_M-pyrifera_M_contig119365.3997.1 ID=mRNA_M-pyrifera_M_contig119365.3997.1|Name=mRNA_M-pyrifera_M_contig119365.3997.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1062bp|location=Sequence derived from alignment at M-pyrifera_M_contig119365:3..545+ (Macrocystis pyrifera P11B4 male)
ATGACTGCCGCCACCCGCGCTCCCTGGCGGGTCGGCATCGAAGCAGCTCG
CGAAGGTTCGCACCTCACCTGTAACCTGACGATCCCCGACACGGGACGCT
ATGTTCCAGCCTGGCTCAAATACTGGCGCGTCGCTGATGCCTTTGGACAG
GGAAATCTGAAACGCACGACTGACATCTATCTCTCCGAAGACGACCAGAA
CTGGGCACAGAAAAAACTGTATTGCCCCGAGTATCCGCTGCCGACTCTCG
CGATTCACGCGGGCGCGCAATGGATCACCAAACGCTGGCCCCCCGAAAGC
TTCGCTGCGGTCGGTGCCAAAGCCATCCGTCGCTTCCGTTGCCAGGTTGT
CCTGGTGGGAACTTCTGCAGAAAGAGAACTGACCGGCCATATCGAAAAAC
TGCTGCAAAAGTTCGTTCCGACCGGCAGGGTCATCAATCTGGCAGGGGAA
ACAACGCTCAAACAACTCGCCGCGGTTTTACAGCAATCCGACTTTGTCCT
CACCAATGATTCCGGCCCCATGCACCTGGCCATGACTGCCGCCACCCGCG
CTCCCTGGCGGGTCGGCATCGAAGCAGCTCGCGAAGGTTCGCACCTCACC
TGTAACCTGACGATCCCCGACACGGGACGCTATGTTCCAGCCTGGCTCAA
ATACTGGCGCGTCGCTGATGCCTTTGGACAGGGAAATCTGAAACGCACGA
CTGACATCTATCTCTCCGAAGACGACCAGAACTGGGCACAGAAAAAACTG
TATTGCCCCGAGTATCCGCTGCCGACTCTCGCGATTCACGCGGGCGCGCA
ATGGATCACCAAACGCTGGCCCCCCGAAAGCTTCGCTGCGGTCGGTGCCA
AAGCCATCCGTCGCTTCCGTTGCCAGGTTGTCCTGGTGGGAACTTCTGCA
GAAAGAGAACTGACCGGCCATATCGAAAAACTGCTGCAAAAGTTCGTTCC
GACCGGCAGGGTCATCAATCTGGCAGGGGAAACAACGCTCAAACAACTCG
CCGCGGTTTTACAGCAATCCGACTTTGTCCTCACCAATGATTCCGGCCCC
ATGCACCTGGCC
back to top