mRNA_M-pyrifera_M_contig119352.3993.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig119352.3993.1 vs. uniprot
Match: A0A432UXA7_9GAMM (Flagellar hook-associated protein 3 n=1 Tax=Thiothrix sp. TaxID=1032 RepID=A0A432UXA7_9GAMM) HSP 1 Score: 146 bits (368), Expect = 5.640e-39 Identity = 78/170 (45.88%), Postives = 105/170 (61.76%), Query Frame = 1
Query: 28 GGVVYNGDQTNREIKISEFRTVTDGFTGFEVFSGIRNGNGTYVTNLAAGNTGSGQIVPGGVVDKAAYQAHDFRISFTGPGTYDVIDDTAGATVLAAQTYTDGAAITFNGIQLTLIGTPAAGDEFLVGPSQNQSVFETVERLVATLESPTALDADAAVFQNDLDRALGDID 537
G VVY GDQ +IS+ R V TG ++F IRNGNG Y + NTGS ++ G ++D A+Q +++ I FT P T+DVI+ T GAT L QTYT G AI FNG+Q+ + GTP AGDEF + PSQNQ +F TV++ L + T A A F +D ++G+ID
Sbjct: 151 GKVVYQGDQKQNHSQISDSRKVITNDTGDQIFQRIRNGNGHYSVAANSANTGSAKLNEGSLIDANAFQRNEYTIEFTTPTTFDVINTTTGATELPMQTYTAGEAIQFNGMQVNIEGTPKAGDEFFIKPSQNQDIFTTVQQFNNALATDTNNPAVQAQFHQSMDSSIGEID 320
BLAST of mRNA_M-pyrifera_M_contig119352.3993.1 vs. uniprot
Match: A0A522M1J3_9GAMM (Flagellar hook-associated protein 3 n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A522M1J3_9GAMM) HSP 1 Score: 146 bits (368), Expect = 5.640e-39 Identity = 81/180 (45.00%), Postives = 111/180 (61.67%), Query Frame = 1
Query: 1 TQAFTTDPAGGVVYNGDQTNREIKISEFRTVTDGFTGFEVFSGIRNGNGTYVTNLAAGNTGSGQIVPGGVVDKAAYQAHDFRISFTGPGTYDVIDDTAGATVLAAQTYTDGAAITFNGIQLTLIGTPAAGDEFLVGPSQNQSVFETVERLVATLESPTALDADAAVFQNDLDRALGDIDQ 540
TQ FT +G V Y GD +R ++IS R V G +G +VF IRNGNGT+V +GNTG+G I PG V D +++ A + ++F TY+V D + + A+ Y+ G AI+FNGI++++ GTPAA D F + PS NQ +F T LV TLE T A A FQN+++R L DIDQ
Sbjct: 143 TQPFTQAASGTVSYAGDSGSRSLQISATRQVAAGDSGQDVFRAIRNGNGTFVVEAGSGNTGTGVIDPGSVTDPSSWVADTYTLTFLTATTYEVRD--SANNLEASGAYSSGGAISFNGIRVSVSGTPAASDSFTIEPSANQDIFTTALNLVTTLEGVTTTSAGTAEFQNNMNRFLSDIDQ 320
BLAST of mRNA_M-pyrifera_M_contig119352.3993.1 vs. uniprot
Match: A0A521RGZ8_9GAMM (Flagellar hook-associated protein 3 n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A521RGZ8_9GAMM) HSP 1 Score: 144 bits (362), Expect = 4.620e-38 Identity = 78/176 (44.32%), Postives = 103/176 (58.52%), Query Frame = 1
Query: 10 FTTDPAGGVVYNGDQTNREIKISEFRTVTDGFTGFEVFSGIRNGNGTYVTNLAAGNTGSGQIVPGGVVDKAAYQAHDFRISFTGPGTYDVIDDTAGATVLAAQTYTDGAAITFNGIQLTLIGTPAAGDEFLVGPSQNQSVFETVERLVATLESPTALDADAAVFQNDLDRALGDID 537
F+ D AG VVY GD +R + I + V G +G +F IRNGNG + N G+G G VVD A+ +FRI+FT P +YDVI+DT T+L+AQ Y+ GA I FNG++L + GTPAAGD F V P+ NQ +F + L LES A A F N ++R L +ID
Sbjct: 148 FSKDAAGNVVYAGDDGSRAVAIGPDQQVVVGESGTRLFRAIRNGNGRFAVAPNPANAGNGVSDAGAVVDATAFTKDNFRIAFTSPASYDVINDTTSTTILSAQPYSSGAVIAFNGVELHIGGTPAAGDSFTVTPAANQDMFAVLRNLAEDLESGLMSPAALARFHNGMNRTLAEID 323
BLAST of mRNA_M-pyrifera_M_contig119352.3993.1 vs. uniprot
Match: A0A836S2A6_9GAMM (Flagellar hook-associated protein 3 n=1 Tax=Thiotrichales bacterium TaxID=2026796 RepID=A0A836S2A6_9GAMM) HSP 1 Score: 144 bits (363), Expect = 4.980e-38 Identity = 77/178 (43.26%), Postives = 108/178 (60.67%), Query Frame = 1
Query: 16 TDPAGG---VVYNGDQTNREIKISEFRTVTDGFTGFEVFSGIRNGNGTYVTNLAAGNTGSGQIVPGGVVDKAAYQAHDFRISFTGPGTYDVIDDTAGATVLAAQTYTDGAAITFNGIQLTLIGTPAAGDEFLVGPSQNQSVFETVERLVATLESPTALDADAAVFQNDLDRALGDIDQ 540
T P G V Y GD + ++I RTVT +G +VF IRNGNG + N AAGNTG+ I G V D A +Q +D+ I FT TYDV+D+T G+T++ TYT A I F G+Q+++ GTPA GD F + PS NQ +F+TV + L++P A DA+ A + ++ + D+DQ
Sbjct: 170 TQPFSGNNPVSYAGDDGVQTVQIGPGRTVTTSHSGMDVFQRIRNGNGKFNVNAAAGNTGTAIISQGSVTDNALFQQNDYSIQFTSATTYDVVDNTTGSTLVTGATYTADAQIQFAGLQVSISGTPATGDNFQIKPSTNQDLFQTVNNFIDILKNPPANDAEKAQRRQKMNAFMSDLDQ 347
BLAST of mRNA_M-pyrifera_M_contig119352.3993.1 vs. uniprot
Match: A0A352KS29_9GAMM (Flagellar hook-associated protein 3 n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A352KS29_9GAMM) HSP 1 Score: 138 bits (348), Expect = 4.930e-36 Identity = 74/170 (43.53%), Postives = 108/170 (63.53%), Query Frame = 1
Query: 28 GGVVYNGDQTNREIKISEFRTVTDGFTGFEVFSGIRNGNGTYVTNLAAGNTGSGQIVPGGVVDKAAYQAHDFRISFTGPGTYDVIDDTAGATVLAAQTYTDGAAITFNGIQLTLIGTPAAGDEFLVGPSQNQSVFETVERLVATLESPTALDADAAVFQNDLDRALGDID 537
G V Y GDQ R+++I ++ +G+ VF +NGNGT+VT AAGN+G+G + G VVD AA + I FT TYDV++ T GAT+LAAQ++T +I+F+G+Q+ ++G P D F + PSQ+QS ET+ ++TL + + DA+ A +Q L RAL DID
Sbjct: 151 GAVNYAGDQGQRQVQIGTGLSLPISDSGYAVFLTPKNGNGTFVTAAAAGNSGNGVVTQGSVVDSAALTGDSYEIRFTAVDTYDVVNVTTGATILAAQSFTPDQSISFDGLQVEILGQPQTSDVFELDPSQSQSPLETLVNFISTLSATQSTDAEKADYQIGLGRALTDID 320
BLAST of mRNA_M-pyrifera_M_contig119352.3993.1 vs. uniprot
Match: UPI000E31828A (flagellar hook-associated protein FlgL n=1 Tax=Steroidobacter cummioxidans TaxID=1803913 RepID=UPI000E31828A) HSP 1 Score: 137 bits (344), Expect = 1.960e-35 Identity = 75/180 (41.67%), Postives = 102/180 (56.67%), Query Frame = 1
Query: 1 TQAFTTDPAGGVVYNGDQTNREIKISEFRTVTDGFTGFEVFSGIRNGNGTYVTNLAAGNTGSGQIVPGGVVDKAAYQAHDFRISFTGPGTYDVIDDTAGATVLAAQTYTDGAAITFNGIQLTLIGTPAAGDEFLVGPSQNQSVFETVERLVATLESPTALDADAAVFQNDLDRALGDIDQ 540
TQ F+ + Y DQ +R+++IS + + D GFEVF IR GNGT+ T + GNTGSG I G VVD+ ++ D+ I FT P Y++ D A V+ A TYT G+AITFNG+ +T+ G PA GD F V S+N+S+FET+ +V L P A L L +DQ
Sbjct: 144 TQPFSGGSGTPINYVADQGSRQLQISSTQRIADSHNGFEVFVNIREGNGTFSTAVNMGNTGSGAIDVGTVVDRPSWIPDDYTIRFTSPTAYEITDGATPANVVQAGTYTAGSAITFNGVSVTIAGAPATGDTFTVNRSRNESIFETIGNIVDVLRLPAGDATANAKLTTSLQGGLQQLDQ 323
BLAST of mRNA_M-pyrifera_M_contig119352.3993.1 vs. uniprot
Match: A0A2W4M2N5_9PROT (Flagellar hook-associated protein 3 n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4M2N5_9PROT) HSP 1 Score: 135 bits (340), Expect = 7.540e-35 Identity = 72/180 (40.00%), Postives = 108/180 (60.00%), Query Frame = 1
Query: 1 TQAFTTDPAGGVVYNGDQTNREIKISEFRTVTDGFTGFEVFSGIRNGNGTYVTNLAAGNTGSGQIVPGGVVDKAAYQAHDFRISFTGPGTYDVIDDTAGATVLAAQTYTDGAAITFNGIQLTLIGTPAAGDEFLVGPSQNQSVFETVERLVATLESPTALDADAAVFQNDLDRALGDIDQ 540
T+ F +G V Y GDQ +R++++ + V+DG +GF+VF I GNGT+VT +A GN+GSG+I G + D +A+ D+ ++F G +++ D V+AA YT GA I FNGIQ+T+ G PA GD F + S+ + VF TV R+ L P + A A + L+R+L +DQ
Sbjct: 144 TRPFAGAASGTVSYAGDQGSRQLQVGPTQRVSDGHSGFDVFMNIPGGNGTFVTAVAPGNSGSGRIDVGTITDISAWVPDDYTLTFDATGQWEITDGATPPNVVAAGLYTSGAPIEFNGIQITITGEPADGDTFFIERSRPEDVFTTVSRVARALSQPASDPAAMAQLASTLERSLQQLDQ 323
BLAST of mRNA_M-pyrifera_M_contig119352.3993.1 vs. uniprot
Match: A0A1J5T5H1_9ZZZZ (Flagellar hook-associated protein 3 n=2 Tax=root TaxID=1 RepID=A0A1J5T5H1_9ZZZZ) HSP 1 Score: 135 bits (340), Expect = 8.350e-35 Identity = 78/174 (44.83%), Postives = 107/174 (61.49%), Query Frame = 1
Query: 4 QAFTTDPAGGVVYNGDQTNREIKISEFRTVTDGFTGFEVFSGIRNGNGTYVTNLAAGNTGSGQIVPGGVVDKAAYQAHDFRISFTGPGT-YDVIDDTAG--ATVLAAQT---YTDGAAITFNGIQLTLIGTPAAGDEFLVGPSQNQSVFETVERLVATLESPTALDADAAVFQN 507
Q F PAG VVY GD R+++++ R ++ +G ++F IRNGNGT+ T LAAGNTG+G I G V + Y + ++++F GT Y + D TAG +A QT Y G AI+FNGIQ ++ GTPAAGD F V PS NQSVF+T+ +L+ TL +P + A V N
Sbjct: 145 QPFVNTPAG-VVYQGDDVQRKMQVAPSRQISSSDSGADLFMRIRNGNGTFQTALAAGNTGTGTISQGVVTNSTLYSGNSYQVTFGAGGTTYSITDVTAGPPGVAVAGQTGVAYVSGQAISFNGIQFSITGTPAAGDTFNVTPSSNQSVFDTLNKLINTLSTPLSGATAATVAAN 317
BLAST of mRNA_M-pyrifera_M_contig119352.3993.1 vs. uniprot
Match: A0A841HQM0_9GAMM (Flagellar hook-associated protein 3 FlgL n=1 Tax=Povalibacter uvarum TaxID=732238 RepID=A0A841HQM0_9GAMM) HSP 1 Score: 134 bits (337), Expect = 2.100e-34 Identity = 71/181 (39.23%), Postives = 110/181 (60.77%), Query Frame = 1
Query: 1 TQAFTTDPAGGVVYNGDQTNREIKISEFRTVTDGFTGFEVFSGIRNGNGTYVTNLAAGNTGSGQIVPGGVVDKAAYQAHDFRISFTGPGTYDVIDD-TAGATVLAAQTYTDGAAITFNGIQLTLIGTPAAGDEFLVGPSQNQSVFETVERLVATLESPTALDADAAVFQNDLDRALGDIDQ 540
TQ F +G VVY GDQ +R +++ + + D +GF+VF I GNGT+ T A NTG+G I G V + AA+ ++ ++FT T++V D T V+++ TYT G AI FNG Q+ + G PAAGD F + +Q++SVF++++R+V L +P+ A A + L+R+L +DQ
Sbjct: 144 TQPFAGATSGNVVYAGDQGSRLLQVGPTQRIADSHSGFDVFMNITEGNGTFYTQATATNTGNGSISVGSVANPAAWVRDNYTLTFTSATTWEVTDTATPTPNVVSSGTYTSGDAIAFNGAQVVIKGNPAAGDSFSINQAQSESVFDSIDRVVQALRTPSETPAATAQLTSTLERSLQQVDQ 324
BLAST of mRNA_M-pyrifera_M_contig119352.3993.1 vs. uniprot
Match: A0A1T5LX22_9GAMM (Flagellar hook-associated protein 3 FlgL n=1 Tax=Pseudoxanthomonas indica TaxID=428993 RepID=A0A1T5LX22_9GAMM) HSP 1 Score: 133 bits (334), Expect = 5.380e-34 Identity = 67/168 (39.88%), Postives = 102/168 (60.71%), Query Frame = 1
Query: 31 GVVYNGDQTNREIKISEFRTVTDGFTGFEVFSGIRNGNGTYVTNLAAGNTGSGQIVPGGVVDKAAYQAHDFRISFTGPGTYDVIDDTAGATVLAAQTYTDGAAITFNGIQLTLIGTPAAGDEFLVGPSQNQSVFETVERLVATLESPTALDADAAVFQNDLDRALGDI 534
GV+Y+GDQT R+++++ V+D G EVF +R G+G A GNTG+G ++ V D + Y +R++FTGP TYD+ D G T +A+ TYT G +I+ G+Q+ + G P AGDEF +GPS ++ +F T++ L+ L S DA A QN L ++ D+
Sbjct: 154 GVIYSGDQTQRQVEVAPDTYVSDTLPGSEVFLRLRTGDGRIDGAAATGNTGTGLLMDFSVTDSSTYNGASYRVAFTGPNTYDIYD--GGPTPIASGTYTKGQSISVGGVQMKIDGQPNAGDEFNLGPSGSRDIFGTLQNLIGALNSNPTTDAQRAAMQNQLQASMRDV 319 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119352.3993.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig119352.3993.1 >prot_M-pyrifera_M_contig119352.3993.1 ID=prot_M-pyrifera_M_contig119352.3993.1|Name=mRNA_M-pyrifera_M_contig119352.3993.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=180bp TQAFTTDPAGGVVYNGDQTNREIKISEFRTVTDGFTGFEVFSGIRNGNGTback to top mRNA from alignment at M-pyrifera_M_contig119352:6..545+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig119352.3993.1 ID=mRNA_M-pyrifera_M_contig119352.3993.1|Name=mRNA_M-pyrifera_M_contig119352.3993.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=540bp|location=Sequence derived from alignment at M-pyrifera_M_contig119352:6..545+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig119352:6..545+ >mRNA_M-pyrifera_M_contig119352.3993.1 ID=mRNA_M-pyrifera_M_contig119352.3993.1|Name=mRNA_M-pyrifera_M_contig119352.3993.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1080bp|location=Sequence derived from alignment at M-pyrifera_M_contig119352:6..545+ (Macrocystis pyrifera P11B4 male)back to top |