mRNA_M-pyrifera_M_contig118778.3868.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig118778.3868.1 vs. uniprot
Match: A0A2J6LEV5_LACSA (Uncharacterized protein n=2 Tax=Lactuca TaxID=4235 RepID=A0A2J6LEV5_LACSA) HSP 1 Score: 72.4 bits (176), Expect = 2.060e-12 Identity = 59/174 (33.91%), Postives = 85/174 (48.85%), Query Frame = 1
Query: 31 EMPCYNVVKNTTSYEIREFATETFEAWTSAATQG-PFDTAVQEGFQANFAYIEGANSQKTKIPMTSPVL------ARPLNTSDVAWNVSFFVPSSLYPTPSSIPTPTNGVDIVAVPRTGVTVAVVEFGGFANHKEFIQAETQLRANLKADGDSVVDPNSDMLFARVYAQLDSPI 531
E P Y VV + + +EIR + T W SA + F A ++GF F YIEGAN +++PMT PVL A PL++S A+ V F++P TP P P +++V T AV +F GFA ++ +L +L S +S FA AQ +SP+
Sbjct: 26 ESPQYTVVHSESEFEIRLY---TDSVWMSAPVKEISFRKATRDGFHRLFQYIEGANLNNSRVPMTVPVLTSLVPGAGPLDSS--AYVVYFYLPEKFQSTP---PLPLPELNLVPDSWTSSCKAVRQFSGFARDNNIVEEAEKLATSLSK---SPYSTSSSSSFAYSIAQYNSPL 188
BLAST of mRNA_M-pyrifera_M_contig118778.3868.1 vs. uniprot
Match: UPI001CFA49BF (heme-binding protein 2-like n=1 Tax=Mangifera indica TaxID=29780 RepID=UPI001CFA49BF) HSP 1 Score: 67.0 bits (162), Expect = 2.480e-10 Identity = 59/181 (32.60%), Postives = 88/181 (48.62%), Query Frame = 1
Query: 7 LLFCEQKIEMPCYNVVKNTTSYEIREFATETFEAWTSAATQG-PFDTAVQEGFQANFAYIEGANSQKTKIPMTSPVL------ARPLNTSDVAWNVSFFVPSSLYPTPSSIPTPTNGVDIVAVPRTGVTVAVVEFGGFANHKEFIQAETQLRANLKADGDSVVDPNSDMLFARVYAQLDSP 528
LL IE P Y VV + + +++R +A T W SA+ + F+ A GF F +IEGAN ++IPMTSPV+ A PL++S A+ V F++P P PTP + + VAV +F G+A + + QL ++L+ + SD +A AQ SP
Sbjct: 22 LLVLSNAIESPKYEVVHSESDFDVRLYAEST---WMSASVRELSFEKATLFGFHRLFQFIEGANLNYSRIPMTSPVVTSIVPGAGPLHSS--AYVVRFYLPVRFQADP---PTPLPELHLKPYVWGSHYVAVRKFSGYAKDENIVHEAEQLASSLRRSPWANCTA-SDSAYAYSIAQYSSP 193
BLAST of mRNA_M-pyrifera_M_contig118778.3868.1 vs. uniprot
Match: UPI0005FB1786 (heme-binding protein 2 n=1 Tax=Jatropha curcas TaxID=180498 RepID=UPI0005FB1786) HSP 1 Score: 66.6 bits (161), Expect = 2.940e-10 Identity = 61/175 (34.86%), Postives = 83/175 (47.43%), Query Frame = 1
Query: 28 IEMPCYNVVKNTTSYEIREFATETFEAWTSA-ATQGPFDTAVQEGFQANFAYIEGANSQKTKIPMTSPVL------ARPLNTSDVAWNVSFFVPSSLYPTPSSIPTPTNGVDIVAVPRTGVTVAVVEFGGFANHKEFIQAETQLRANLKADG-DSVVDPNSDMLFARVYAQLDSP 528
IE P Y VV + +E+R + T W SA ATQ F+ A GF F YI+GAN T+IPMT+PV+ A P +S A++V ++P + P P P + + VAV F GFAN I+ +L +L +V SD FA AQ D+P
Sbjct: 23 IESPRYEVVHEESDFEVRLYGEST---WMSAPATQISFEKATFNGFHRLFQYIQGANLNWTRIPMTAPVVTSIVSGAGPFQSS--AYSVLLYLPVNFQADP---PVPLPELHLKPYVWASHCVAVRTFSGFANDDNIIKEAEKLAVSLNRSLLANVTIAESD--FAYSIAQYDAP 187
BLAST of mRNA_M-pyrifera_M_contig118778.3868.1 vs. uniprot
Match: UPI000B78E47D (heme-binding protein 2-like isoform X2 n=2 Tax=Hevea brasiliensis TaxID=3981 RepID=UPI000B78E47D) HSP 1 Score: 65.9 bits (159), Expect = 8.000e-10 Identity = 53/172 (30.81%), Postives = 85/172 (49.42%), Query Frame = 1
Query: 31 EMPCYNVVKNTTSYEIREFATETFEAWTSAATQGPFDTAVQEGFQANFAYIEGANSQKTKIPMTSPVL------ARPLNTSDVAWNVSFFVPSSLYPTPSSIPTPTNGVDIVAVPRTGVTVAVVEFGGFANHKEFIQAETQLRANLKADGDSVVDPNSDMLFARVYAQLDSP 528
E P Y +V+ + +E+R +A T+ A ++ T+ F+ A +GF F +I+GAN T+IPMT PV+ A P +S A++V F++P+ P P P + + VAV +F GFAN + +L +L + +++ FA AQ DSP
Sbjct: 47 EKPQYEIVRAESEFEVRLYAQSTWMA--ASVTEISFEKATLDGFHRLFQFIQGANLNWTRIPMTVPVVTGIVLGAGPFQSS--AYSVLFYLPAEFQDEP---PVPIPELHLKPFAWDSHCVAVRKFSGFANDDNIVPKAKKLADSLSRSPWTNTT-SAESKFAYSIAQYDSP 210
BLAST of mRNA_M-pyrifera_M_contig118778.3868.1 vs. uniprot
Match: UPI001263CF69 (heme-binding protein 2-like n=1 Tax=Pistacia vera TaxID=55513 RepID=UPI001263CF69) HSP 1 Score: 65.5 bits (158), Expect = 8.470e-10 Identity = 60/185 (32.43%), Postives = 89/185 (48.11%), Query Frame = 1
Query: 7 LLFCEQKIEMPCYNVVKNTTSYEIREFATETFEAWTSAATQG-PFDTAVQEGFQANFAYIEGANSQKTKIPMTSPVL------ARPLNTSDVAWNVSFFVPSSLYPTPSSIPTPTNGVDIVAVPRTGVTVAVVEFGGFANHKEFIQAETQLRANLK----ADGDSVVDPNSDMLFARVYAQLDSP 528
L+ IE P Y VV + + +++R + T W SA + F+ A GF F +IEGAN ++IPMTSPV+ A PL++S A+ V F++P P PTP + + VAV +F GFA + ++ +L +L+ A+G S SD +A AQ SP
Sbjct: 16 LVVLSNAIESPKYEVVHSESDFDVRLYTEST---WMSAPVRELSFEKATLFGFHRLFQFIEGANLNYSRIPMTSPVVTSIVPGAGPLHSS--AYVVRFYLPVKFQADP---PTPLPELHLKPYVWDSRCVAVRKFSGFAKDENIVREAEKLAISLRRSPWANGTS-----SDSDYAYSIAQYSSP 187
BLAST of mRNA_M-pyrifera_M_contig118778.3868.1 vs. uniprot
Match: A0A7C9DTG1_OPUST (Uncharacterized protein n=3 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9DTG1_OPUST) HSP 1 Score: 65.5 bits (158), Expect = 9.310e-10 Identity = 57/181 (31.49%), Postives = 84/181 (46.41%), Query Frame = 1
Query: 7 LLFCEQKIEMPCYNVVKNTTSYEIREFATETFEAWTSAATQG-PFDTAVQEGFQANFAYIEGANSQKTKIPMTSPVL------ARPLNTSDVAWNVSFFVPSSLYPTPSSIPTPTNGVDIVAVPRTGVTVAVVEFGGFANHKEFIQAETQLRANLKADGDSVVDPNSDMLFARVYAQLDSP 528
++ + E P Y VV + + +EIR + W SA F A + GF F YI+GAN ++IPMT PVL A PL++S A+ V F++P TP P P +++ V + VAV +F GFA ++ +L +L ++D A AQ DSP
Sbjct: 23 MMVVSEATESPLYTVVHSESEFEIRFYRDS---VWMSAPVNDLSFHQATKFGFHRLFQYIQGANLNFSRIPMTKPVLTSIVPGAGPLHSS--AYVVHFYLPVKFQETP---PLPLPELNLKPVSWSSHCVAVRKFSGFARDSNVVKEAEKLATSL-GRSPWANSTSADSKHAYSIAQYDSP 194
BLAST of mRNA_M-pyrifera_M_contig118778.3868.1 vs. uniprot
Match: A0A0K9QVV3_SPIOL (Uncharacterized protein n=1 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9QVV3_SPIOL) HSP 1 Score: 64.7 bits (156), Expect = 1.500e-9 Identity = 50/147 (34.01%), Postives = 73/147 (49.66%), Query Frame = 1
Query: 31 EMPCYNVVKNTTSYEIREFATETFEAWTSAATQG-PFDTAVQEGFQANFAYIEGANSQKTKIPMTSPVL------ARPLNTSDVAWNVSFFVPSSLYPTPSSIPTPTNGVDIVAVPRTGVTVAVVEFGGFANHKEFIQAETQLRANL 450
E P Y+V+ + + +EIR + T W SA F A + GF F YI+GAN ++IPMT PVL A PL++S A+ V+F++P TP P P +D+ + VAV +F GFA + +L +L
Sbjct: 18 ESPKYSVIHSESDFEIRVYKEST---WMSAPVDHLSFRQATKLGFHRLFQYIQGANLNSSRIPMTKPVLTSIVPEAGPLHSS--AYLVNFYLPLKFQGTP---PLPLPELDLKPISWPSHCVAVRKFSGFAGDSNVVTEADKLATSL 156
BLAST of mRNA_M-pyrifera_M_contig118778.3868.1 vs. uniprot
Match: A0A2U1P4M8_ARTAN (SOUL heme-binding protein, Regulatory factor, effector binding domain protein n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1P4M8_ARTAN) HSP 1 Score: 64.7 bits (156), Expect = 1.540e-9 Identity = 55/180 (30.56%), Postives = 88/180 (48.89%), Query Frame = 1
Query: 10 LFCEQKIEMPCYNVVKNTTSYEIREFATETFEAWTSAATQGPFDTAVQEGFQANFAYIEGANSQKTKIPMTSPVL------ARPLNTSDVAWNVSFFVPSSLYPTPSSIPTPTNGVDIVAVPRTGVTVAVVEFGGFANHKEFIQAETQLRANLKADGDSVVDPNSDMLFARVYAQLDSPI 531
L C + E P Y V+ + YE+R + + T+ + F +A +GF F YIEGAN +++PMT PVL A PL++S A+ V F++P+ +P I P + + P + AV +F GFA K + +L +L S +SD+ ++ AQ +SP+
Sbjct: 20 LVCSKDYESPGYTVIHTESEYEVRLYKESVW--MTAPVKETSFRSATNDGFHRLFQYIEGANLNNSRVPMTVPVLTSLVPGAGPLDSS--AYVVYFYLPAEFQASPP-IGLPELNLKPDSWPIS--CKAVRQFSGFARDKNVVSEAEKLATSLSTSQYST-SSSSDITYS--VAQYNSPL 189
BLAST of mRNA_M-pyrifera_M_contig118778.3868.1 vs. uniprot
Match: A0A164XIP5_DAUCS (Uncharacterized protein n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A164XIP5_DAUCS) HSP 1 Score: 64.3 bits (155), Expect = 2.540e-9 Identity = 55/175 (31.43%), Postives = 84/175 (48.00%), Query Frame = 1
Query: 31 EMPCYNVVKNTTSYEIREFATETFEAWTSAA--TQGPFDTAVQEGFQANFAYIEGANSQKTKIPMTSPVL------ARPLNTSDVAWNVSFFVPSSLYPTPSSIPTPTNGVDIVAVPRTGVTVAVVEFGGFANHKEFIQAETQLRANLKADGDSVVDPNSDMLFARVYAQLDSPI 531
E P Y +V + + YEIR + AW A +Q F+ A + GF F YIEGAN +++PMT PVL A PL +S ++V F++P TP P P +++ +AV +F GFA K + +L +L + +S+ +A AQ +SP+
Sbjct: 36 ESPEYTLVHSESDYEIRLYRVA---AWMIAPVKSQISFEKATRNGFHRLFQYIEGANLNSSRVPMTIPVLTSIVPGAGPLRSS--GYSVQFYLPVKFQATP---PLPLPELELEPDHWNSRCIAVRKFSGFAKDKNIVTEAEKLAISLSRSPWANYT-SSETEYAYSIAQYNSPL 201
BLAST of mRNA_M-pyrifera_M_contig118778.3868.1 vs. uniprot
Match: A0A2I0I2H1_PUNGR (heme-binding protein 2-like n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0I2H1_PUNGR) HSP 1 Score: 63.9 bits (154), Expect = 3.180e-9 Identity = 51/155 (32.90%), Postives = 75/155 (48.39%), Query Frame = 1
Query: 7 LLFCEQKIEMPCYNVVKNTTSYEIREFATETFEAWTSAATQG-PFDTAVQEGFQANFAYIEGANSQKTKIPMTSPVL------ARPLNTSDVAWNVSFFVPSSLYPTPSSIPTPTNGVDIVAVPRTGVTVAVVEFGGFANHKEFIQAETQLRANL 450
LL IE P Y +V + +E+R + T W +A + F+ A GF F +IEGAN ++IPMT PV+ A PL++S A+ V F++P+ TP PTP + + T VA +F GFA + + QL +L
Sbjct: 20 LLAAAGAIESPRYTIVHAESDFEVRLYGNST---WMAAPVRDLSFEKATLNGFHRLFQFIEGANLNYSRIPMTLPVVTSIVPGAGPLHSS--AYAVLFYLPAKFQATP---PTPLPELHLKPFNWTSHCVAARKFPGFAKDENIVHEAEQLAFSL 166 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118778.3868.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig118778.3868.1 >prot_M-pyrifera_M_contig118778.3868.1 ID=prot_M-pyrifera_M_contig118778.3868.1|Name=mRNA_M-pyrifera_M_contig118778.3868.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=178bp SSLLFCEQKIEMPCYNVVKNTTSYEIREFATETFEAWTSAATQGPFDTAVback to top mRNA from alignment at M-pyrifera_M_contig118778:1..534- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig118778.3868.1 ID=mRNA_M-pyrifera_M_contig118778.3868.1|Name=mRNA_M-pyrifera_M_contig118778.3868.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=534bp|location=Sequence derived from alignment at M-pyrifera_M_contig118778:1..534- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig118778:1..534- >mRNA_M-pyrifera_M_contig118778.3868.1 ID=mRNA_M-pyrifera_M_contig118778.3868.1|Name=mRNA_M-pyrifera_M_contig118778.3868.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1068bp|location=Sequence derived from alignment at M-pyrifera_M_contig118778:1..534- (Macrocystis pyrifera P11B4 male)back to top |