mRNA_M-pyrifera_M_contig118753.3860.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig118753.3860.1 vs. uniprot
Match: A0A518AF51_9PLAN (Outer membrane-specific lipoprotein transporter subunit LolE n=9 Tax=Gimesia TaxID=1649453 RepID=A0A518AF51_9PLAN) HSP 1 Score: 348 bits (892), Expect = 6.920e-113 Identity = 176/182 (96.70%), Postives = 181/182 (99.45%), Query Frame = 1
Query: 1 SATVGAMLLLVTFSMYDSAFALLNFQYDKLLLSDIDLTFKDDHDYSAYFEAQQIQGVDYAEPLFQVGCTLQNGIHEKKTGITGILRDARLTIPRDTEGNRVEVPPTGLLVTRKLADILHIQAGDSIRMVPVSGDRIPRQVPVMKIIDSYLGLTVYADFHYLNRLMGEADSLTSVQLKTNPRP 546
SATVGAMLLLVTFSMYDSAFALLNFQYDKLLLSDIDLTFKDDHDYSAY+EAQQIQGVDYAEPLFQVGCTLQNGIHEKKTGITGILR+ARLTIPRDT GNRVEVPPTGLLVTRKLADILHIQAGDSIRM+PVSGDRIPRQVPVMKIIDSYLGLTVYADFHYLNRLMGEADSL++VQLKTNPRP
Sbjct: 447 SATVGAMLLLVTFSMYDSAFALLNFQYDKLLLSDIDLTFKDDHDYSAYYEAQQIQGVDYAEPLFQVGCTLQNGIHEKKTGITGILRNARLTIPRDTAGNRVEVPPTGLLVTRKLADILHIQAGDSIRMIPVSGDRIPRQVPVMKIIDSYLGLTVYADFHYLNRLMGEADSLSNVQLKTNPRP 628
BLAST of mRNA_M-pyrifera_M_contig118753.3860.1 vs. uniprot
Match: A0A518IKI6_9PLAN (Outer membrane-specific lipoprotein transporter subunit LolE n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518IKI6_9PLAN) HSP 1 Score: 319 bits (818), Expect = 6.390e-102 Identity = 161/182 (88.46%), Postives = 172/182 (94.51%), Query Frame = 1
Query: 1 SATVGAMLLLVTFSMYDSAFALLNFQYDKLLLSDIDLTFKDDHDYSAYFEAQQIQGVDYAEPLFQVGCTLQNGIHEKKTGITGILRDARLTIPRDTEGNRVEVPPTGLLVTRKLADILHIQAGDSIRMVPVSGDRIPRQVPVMKIIDSYLGLTVYADFHYLNRLMGEADSLTSVQLKTNPRP 546
SATVGAMLLLVTFSMYDSAFALLNFQYDKLLLSDID+ FKDDHD+SA++E+QQI GVDYAEPLFQVGCTL+NGIHEKK GITGIL DARLT+PRDT GNRV+VP TG+LVTRKLADIL IQAGDSI M+PVSGDRIPRQVPVMKIIDSYLGLTVYADF YLNRLMGE+ SLTSVQLKTNPRP
Sbjct: 444 SATVGAMLLLVTFSMYDSAFALLNFQYDKLLLSDIDIGFKDDHDFSAFYESQQIPGVDYAEPLFQVGCTLKNGIHEKKIGITGILSDARLTVPRDTAGNRVQVPQTGILVTRKLADILQIQAGDSIEMIPVSGDRIPRQVPVMKIIDSYLGLTVYADFQYLNRLMGESSSLTSVQLKTNPRP 625
BLAST of mRNA_M-pyrifera_M_contig118753.3860.1 vs. uniprot
Match: A0A350K666_9PLAN (ABC transporter permease (Fragment) n=3 Tax=Planctomycetaceae TaxID=126 RepID=A0A350K666_9PLAN) HSP 1 Score: 305 bits (782), Expect = 3.620e-98 Identity = 153/182 (84.07%), Postives = 168/182 (92.31%), Query Frame = 1
Query: 1 SATVGAMLLLVTFSMYDSAFALLNFQYDKLLLSDIDLTFKDDHDYSAYFEAQQIQGVDYAEPLFQVGCTLQNGIHEKKTGITGILRDARLTIPRDTEGNRVEVPPTGLLVTRKLADILHIQAGDSIRMVPVSGDRIPRQVPVMKIIDSYLGLTVYADFHYLNRLMGEADSLTSVQLKTNPRP 546
SATVGAMLLLVTFSMYDSAFALLNFQYDKLLLSDIDL+FKDDHD++A FE+QQ+ GVDYAEPLF +GCTL+NGIHEKK GITGI R A+LTIPRDT GNRV VP TG+LVTRKLADIL IQAGDS+ M+PV+GDR+ RQVPVMKIIDSYLGLTVYADF YLNRLMGE+ +LTSVQLKTNPRP
Sbjct: 444 SATVGAMLLLVTFSMYDSAFALLNFQYDKLLLSDIDLSFKDDHDFAALFESQQLTGVDYAEPLFHIGCTLKNGIHEKKAGITGITRTAQLTIPRDTAGNRVNVPETGILVTRKLADILKIQAGDSLEMIPVTGDRVARQVPVMKIIDSYLGLTVYADFDYLNRLMGESQTLTSVQLKTNPRP 625
BLAST of mRNA_M-pyrifera_M_contig118753.3860.1 vs. uniprot
Match: A6CA40_9PLAN (Uncharacterized protein n=8 Tax=Planctomycetaceae TaxID=126 RepID=A6CA40_9PLAN) HSP 1 Score: 305 bits (780), Expect = 2.750e-96 Identity = 152/182 (83.52%), Postives = 168/182 (92.31%), Query Frame = 1
Query: 1 SATVGAMLLLVTFSMYDSAFALLNFQYDKLLLSDIDLTFKDDHDYSAYFEAQQIQGVDYAEPLFQVGCTLQNGIHEKKTGITGILRDARLTIPRDTEGNRVEVPPTGLLVTRKLADILHIQAGDSIRMVPVSGDRIPRQVPVMKIIDSYLGLTVYADFHYLNRLMGEADSLTSVQLKTNPRP 546
SATVGAMLLLVTFSMYDSAFALLNFQYDKLLLSDID++FKDDHD++A FE+QQ+ GVDYAEPLF +GCTL+NGIHEKK GITGI R A+LTIPRDT GNRV VP TG+LVTRKLADIL IQAGDS+ M+PV+GDR+ RQVPVMKIIDSYLGLTVYADF YLNRLMGE+ +LTSVQLKTNPRP
Sbjct: 445 SATVGAMLLLVTFSMYDSAFALLNFQYDKLLLSDIDISFKDDHDFAALFESQQLTGVDYAEPLFHIGCTLKNGIHEKKAGITGITRTAQLTIPRDTAGNRVNVPETGILVTRKLADILKIQAGDSLEMIPVTGDRVARQVPVMKIIDSYLGLTVYADFDYLNRLMGESQTLTSVQLKTNPRP 626
BLAST of mRNA_M-pyrifera_M_contig118753.3860.1 vs. uniprot
Match: A0A517VQ85_9PLAN (Outer membrane-specific lipoprotein transporter subunit LolC n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VQ85_9PLAN) HSP 1 Score: 294 bits (753), Expect = 2.600e-92 Identity = 150/182 (82.42%), Postives = 165/182 (90.66%), Query Frame = 1
Query: 1 SATVGAMLLLVTFSMYDSAFALLNFQYDKLLLSDIDLTFKDDHDYSAYFEAQQIQGVDYAEPLFQVGCTLQNGIHEKKTGITGILRDARLTIPRDTEGNRVEVPPTGLLVTRKLADILHIQAGDSIRMVPVSGDRIPRQVPVMKIIDSYLGLTVYADFHYLNRLMGEADSLTSVQLKTNPRP 546
SA VGAMLLLVTFSMYDSAFALL+FQYDKLLLSDID+TFKDDHDYSA +E+QQ VDYAEPLF VGCTL+NGI+EKK GITGILR+A+LTIPRDT GNRV VP TG+LVTRKLA+IL IQAGDSI M PV+GDRI RQ+PVMKIIDSYLGLTVYAD+ YLNRLMGEA S+TSVQLKT+P P
Sbjct: 444 SAMVGAMLLLVTFSMYDSAFALLDFQYDKLLLSDIDVTFKDDHDYSALYESQQFPSVDYAEPLFHVGCTLRNGIYEKKVGITGILRNAQLTIPRDTAGNRVVVPETGVLVTRKLAEILRIQAGDSIEMTPVAGDRIARQIPVMKIIDSYLGLTVYADYQYLNRLMGEASSITSVQLKTDPGP 625
BLAST of mRNA_M-pyrifera_M_contig118753.3860.1 vs. uniprot
Match: A0A517ZWU4_9PLAN (Outer membrane-specific lipoprotein transporter subunit LolE n=3 Tax=Symmachiella TaxID=2795780 RepID=A0A517ZWU4_9PLAN) HSP 1 Score: 183 bits (465), Expect = 1.010e-50 Identity = 85/180 (47.22%), Postives = 129/180 (71.67%), Query Frame = 1
Query: 1 SATVGAMLLLVTFSMYDSAFALLNFQYDKLLLSDIDLTFKDDHDYSAYFEAQQIQGVDYAEPLFQVGCTLQNGIHEKKTGITGILRDARLTIPRDTEGNRVEVPPTGLLVTRKLADILHIQAGDSIRMVPVSGDRIPRQVPVMKIIDSYLGLTVYADFHYLNRLMGEADSLTSVQLKTNP 540
+A GA L+ VT M DS ++ FQ+DK++LSD +++ K +HD+S +EAQ++ GVD EP+F VGCT NG+H+KK GITGI+ ARLT+PRD EG V +P TG+++ R+LA++LH+ AGD + +VP+ G+ +PV ++ +S +G++ +A+ YLN L+GE S+TS+QLK P
Sbjct: 442 AAMTGASLVFVTMHMMDSFQEIITFQFDKMMLSDYEISLKGEHDFSVVYEAQRLSGVDLVEPVFGVGCTFHNGLHKKKGGITGIVPTARLTVPRDAEGIPVPIPQTGVMLNRQLANMLHVSAGDQLTIVPLKGETREITIPVTRVYESLMGISAFANLEYLNHLVGEETSVTSLQLKVQP 621
BLAST of mRNA_M-pyrifera_M_contig118753.3860.1 vs. uniprot
Match: A0A2E7ELS1_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7ELS1_9PLAN) HSP 1 Score: 179 bits (455), Expect = 2.540e-49 Identity = 87/182 (47.80%), Postives = 124/182 (68.13%), Query Frame = 1
Query: 1 SATVGAMLLLVTFSMYDSAFALLNFQYDKLLLSDIDLTFKDDHDYSAYFEAQQIQGVDYAEPLFQVGCTLQNGIHEKKTGITGILRDARLTIPRDTEGNRVEVPPTGLLVTRKLADILHIQAGDSIRMVPVSGDRIPRQVPVMKIIDSYLGLTVYADFHYLNRLMGEADSLTSVQLKTNPRP 546
SA +G+ L++ T + DS L++F Y+++L+SD DL FKD+ DY Y E ++ GVDYAEP+ VGCT NG H ++ ITGIL ARLT+PRD +G+ V +P GL++TR+L+ +LH++ GD + +VP+ G+R P Q+PV I+ S +G YADF YLN LM E SL SVQ + + P
Sbjct: 443 SAMMGSALIVQTIQLSDSFDELIDFTYERMLVSDFDLVFKDEVDYGGYLEVARMPGVDYAEPILTVGCTFSNGNHRRQGAITGILPTARLTLPRDADGDAVAIPENGLVLTRRLSKLLHVRTGDKVTVVPLIGERKPLQLPVQLIVXSLVGTGAYADFDYLNELMNEEHSLNSVQAEVDQTP 624
BLAST of mRNA_M-pyrifera_M_contig118753.3860.1 vs. uniprot
Match: A0A518BCE2_9BACT (Outer membrane-specific lipoprotein transporter subunit LolE n=1 Tax=Planctomycetes bacterium Pan216 TaxID=2527975 RepID=A0A518BCE2_9BACT) HSP 1 Score: 174 bits (441), Expect = 2.230e-47 Identity = 87/180 (48.33%), Postives = 127/180 (70.56%), Query Frame = 1
Query: 1 SATVGAMLLLVTFSMYDSAFALLNFQYDKLLLSDIDLTFKDDHDYSAYFEAQQIQGVDYAEPLFQVGCTLQNGIHEKKTGITGILRDARLTIPRDTEGNRVEVPPTGLLVTRKLADILHIQAGDSIRMVPVSGDRIPRQVPVMKIIDSYLGLTVYADFHYLNRLMGEADSLTSVQLKTNP 540
+A GA +L V+F M D+ +L+FQ++K+LLSDID++FKD+ D A E +++ GVD AEPL V CTL++G ++ +TG+ R ARLT+P D +GN V +P +GLL++R LA+IL + GD I + PV G R P +VPV +I+D+Y+GL+VYAD YLN L+GE +++ QLK P
Sbjct: 439 AAAAGAAILFVSFFMMDAIRVMLDFQFEKVLLSDIDVSFKDERDEGAIDEIRRLPGVDRAEPLLMVPCTLRHGSRHRRVSVTGVSRGARLTVPHDRDGNAVAIPSSGLLLSRPLAEILDARRGDRIILEPVKGIREPIEVPVARIVDNYMGLSVYADMDYLNELIGEERAISVAQLKVVP 618
BLAST of mRNA_M-pyrifera_M_contig118753.3860.1 vs. uniprot
Match: A0A518CR01_9PLAN (Outer membrane-specific lipoprotein transporter subunit LolC n=1 Tax=Polystyrenella longa TaxID=2528007 RepID=A0A518CR01_9PLAN) HSP 1 Score: 173 bits (439), Expect = 4.340e-47 Identity = 81/178 (45.51%), Postives = 128/178 (71.91%), Query Frame = 1
Query: 1 SATVGAMLLLVTFSMYDSAFALLNFQYDKLLLSDIDLTFKDDHDYSAYFEAQQIQGVDYAEPLFQVGCTLQNGIHEKKTGITGILRDARLTIPRDTEGNRVEVPPTGLLVTRKLADILHIQAGDSIRMVPVSGDRIPRQVPVMKIIDSYLGLTVYADFHYLNRLMGEADSLTSVQLKT 534
+A++GAMLL++ +M+DS +++FQ+ K+L++D +++FKD YSAY E +++ GVDYAEP+ V C L+ HEKK +TG++ ++LT+P + +G R E+PP GLL+T++LA+ILH+ GD + P ++ R VPV II+SYLGL+ Y + YLNRL+ +S++S+QLKT
Sbjct: 443 AASMGAMLLMIVMAMHDSMDEMMDFQFSKVLVNDYEISFKDPRGYSAYLETRRMPGVDYAEPILNVPCKLRYEHHEKKVSVTGLINHSQLTVPMNVDGERQELPPVGLLLTKRLAEILHVTEGDILHFEPTEREQEVRAVPVAGIINSYLGLSAYVNIDYLNRLVDNEESVSSIQLKT 620
BLAST of mRNA_M-pyrifera_M_contig118753.3860.1 vs. uniprot
Match: A0A257UE39_9BACT (Uncharacterized protein n=1 Tax=Planctomycetia bacterium 21-64-5 TaxID=1970542 RepID=A0A257UE39_9BACT) HSP 1 Score: 169 bits (428), Expect = 1.080e-46 Identity = 86/181 (47.51%), Postives = 127/181 (70.17%), Query Frame = 1
Query: 1 SATVGAMLLLVTFSMYDSAFALLNFQYDKLLLSDIDLTFKDDHDYSAYFEAQQIQGVDYAEPLFQVGCTLQNGIHEKKTGITGILRDARLTIPRDTEGNRVEVPPTGLLVTRKLADILHIQAGDSIRMVPVSGDRIPRQVPVMKIIDSYLGLTVYADFHYLNRLMGEADSLTSVQLKTNPR 543
+A +GA + + + ++ L++FQ+ ++ SDIDL F+D+ +A EA+Q+ GVD AEP VGCT NG H K GITG+ RDARLT+PRD G R+ +P +GL+++RKLA++L+++ GD + + P G R PR+VPV+ I DSY+GLTVYAD HYL+RL+ E +++ VQL +PR
Sbjct: 185 AAAMGAGMSVNALMLAEATRFLVDFQFFQVQRSDIDLAFEDERSEAALTEARQLPGVDRAEPTLSVGCTFVNGPHSYKGGITGLARDARLTVPRDLAGRRLRIPESGLVMSRKLAELLYLEHGDLVEIRPTKGLREPRRVPVVGIADSYMGLTVYADIHYLSRLVHEELAVSGVQLAIDPR 365 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118753.3860.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig118753.3860.1 >prot_M-pyrifera_M_contig118753.3860.1 ID=prot_M-pyrifera_M_contig118753.3860.1|Name=mRNA_M-pyrifera_M_contig118753.3860.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=176bp MLLLVTFSMYDSAFALLNFQYDKLLLSDIDLTFKDDHDYSAYFEAQQIQGback to top mRNA from alignment at M-pyrifera_M_contig118753:2..547+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig118753.3860.1 ID=mRNA_M-pyrifera_M_contig118753.3860.1|Name=mRNA_M-pyrifera_M_contig118753.3860.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=546bp|location=Sequence derived from alignment at M-pyrifera_M_contig118753:2..547+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig118753:2..547+ >mRNA_M-pyrifera_M_contig118753.3860.1 ID=mRNA_M-pyrifera_M_contig118753.3860.1|Name=mRNA_M-pyrifera_M_contig118753.3860.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1056bp|location=Sequence derived from alignment at M-pyrifera_M_contig118753:2..547+ (Macrocystis pyrifera P11B4 male)back to top |