mRNA_M-pyrifera_M_contig118737.3856.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig118737.3856.1 vs. uniprot
Match: A0A2G8JZ33_STIJA (Uncharacterized protein n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8JZ33_STIJA) HSP 1 Score: 62.4 bits (150), Expect = 3.850e-9 Identity = 35/70 (50.00%), Postives = 49/70 (70.00%), Query Frame = 1
Query: 1 PERGAALVIAKKKAKELKRARKEARKRRQVVLDEEAYLESLDKIIERDFFPDLPLVDAQLAYLQAVEKND 210
P+ G ++A K+ KEL RK +K ++VLDEE Y+E L+KII+RDFFPDLP + Q YL+A ++ND
Sbjct: 4 PKVGEKALVAAKENKELAIVRK--KKPSKIVLDEETYVEDLEKIIQRDFFPDLPKLKVQKEYLEAKQRND 71
BLAST of mRNA_M-pyrifera_M_contig118737.3856.1 vs. uniprot
Match: A0A6V7LTK9_9HYME (Uncharacterized protein (Fragment) n=1 Tax=Bracon brevicornis TaxID=1563983 RepID=A0A6V7LTK9_9HYME) HSP 1 Score: 60.5 bits (145), Expect = 4.940e-9 Identity = 32/54 (59.26%), Postives = 38/54 (70.37%), Query Frame = 1
Query: 70 ARKRRQVVLDEEAYLESLDKIIERDFFPDLPLVDAQLAYLQAVEKNDGRSMAAL 231
A+K + +LDEEAY+E L KIIERDFFPDL + AQ YL AVE ND + M L
Sbjct: 35 AKKSKATILDEEAYIERLGKIIERDFFPDLERLKAQNDYLDAVEHNDVKKMREL 88
BLAST of mRNA_M-pyrifera_M_contig118737.3856.1 vs. uniprot
Match: UPI0009E43F44 (protein DGCR14-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E43F44) HSP 1 Score: 61.2 bits (147), Expect = 9.680e-9 Identity = 32/51 (62.75%), Postives = 39/51 (76.47%), Query Frame = 1
Query: 58 ARKEARKRRQVVLDEEAYLESLDKIIERDFFPDLPLVDAQLAYLQAVEKND 210
AR+ RKR VLDEE Y++SL+KII+RDFFP+LP + AQ YL AVE ND
Sbjct: 20 ARESDRKRNVKVLDEETYVQSLNKIIQRDFFPELPKLQAQHEYLDAVEHND 70
BLAST of mRNA_M-pyrifera_M_contig118737.3856.1 vs. uniprot
Match: A0A6P8YH71_THRPL (splicing factor ESS-2 homolog n=1 Tax=Thrips palmi TaxID=161013 RepID=A0A6P8YH71_THRPL) HSP 1 Score: 60.5 bits (145), Expect = 1.810e-8 Identity = 29/52 (55.77%), Postives = 41/52 (78.85%), Query Frame = 1
Query: 76 KRRQVVLDEEAYLESLDKIIERDFFPDLPLVDAQLAYLQAVEKNDGRSMAAL 231
+R+Q VLDE+AY+E + KI+ERDFFPDL + AQ YL+A+++ND R+M L
Sbjct: 40 RRKQKVLDEDAYIEQIGKIVERDFFPDLEKLRAQNRYLEAMDQNDVRTMREL 91
BLAST of mRNA_M-pyrifera_M_contig118737.3856.1 vs. uniprot
Match: A0A8J1XP94_OWEFU (Ofus.G041988 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1XP94_OWEFU) HSP 1 Score: 59.3 bits (142), Expect = 4.630e-8 Identity = 28/45 (62.22%), Postives = 37/45 (82.22%), Query Frame = 1
Query: 76 KRRQVVLDEEAYLESLDKIIERDFFPDLPLVDAQLAYLQAVEKND 210
K ++ VLDEEAY E ++KII+RDFFPDL ++AQ YL+A+EKND
Sbjct: 25 KEQKTVLDEEAYSEGIEKIIKRDFFPDLSKLEAQAEYLEALEKND 69
BLAST of mRNA_M-pyrifera_M_contig118737.3856.1 vs. uniprot
Match: F2US30_SALR5 (Dgcr14 protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2US30_SALR5) HSP 1 Score: 59.3 bits (142), Expect = 4.740e-8 Identity = 26/46 (56.52%), Postives = 39/46 (84.78%), Query Frame = 1
Query: 73 RKRRQVVLDEEAYLESLDKIIERDFFPDLPLVDAQLAYLQAVEKND 210
RK++++VL+E+ Y+ +L+KII+RDFFPDLP++ AQ YL A+E ND
Sbjct: 98 RKKKKLVLEEDEYVSALEKIIQRDFFPDLPMLQAQADYLDALESND 143
BLAST of mRNA_M-pyrifera_M_contig118737.3856.1 vs. uniprot
Match: A0A452I137_9SAUR (Ess-2 splicing factor homolog n=12 Tax=Durocryptodira TaxID=1579337 RepID=A0A452I137_9SAUR) HSP 1 Score: 58.9 bits (141), Expect = 6.290e-8 Identity = 34/71 (47.89%), Postives = 47/71 (66.20%), Query Frame = 1
Query: 10 GAALVIAKKKAKELKRARKEARKRRQVVLDEEAYLESLDKIIERDFFPDLPLVDAQLAYLQAVEKNDGRSM 222
GAA+ + L+ A +E KRR+ +LDEE+Y+ESL+KII+RDFFPD+ + AQ YL+A E D M
Sbjct: 26 GAAVAV-------LREAAQEPPKRRKRILDEESYIESLEKIIQRDFFPDVEKLRAQKEYLEAEESGDLEKM 89
BLAST of mRNA_M-pyrifera_M_contig118737.3856.1 vs. uniprot
Match: UPI001D0664D4 (splicing factor ESS-2 homolog n=1 Tax=Coccinella septempunctata TaxID=41139 RepID=UPI001D0664D4) HSP 1 Score: 58.2 bits (139), Expect = 1.170e-7 Identity = 27/46 (58.70%), Postives = 37/46 (80.43%), Query Frame = 1
Query: 73 RKRRQVVLDEEAYLESLDKIIERDFFPDLPLVDAQLAYLQAVEKND 210
+KR+Q++LDE++Y+E + KII+RDFFP L + AQ YL AVEKND
Sbjct: 35 KKRKQIILDEDSYVEEIGKIIQRDFFPSLEKMKAQNDYLDAVEKND 80
BLAST of mRNA_M-pyrifera_M_contig118737.3856.1 vs. uniprot
Match: UPI001ED88FD2 (splicing factor ESS-2 homolog isoform X1 n=2 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED88FD2) HSP 1 Score: 58.2 bits (139), Expect = 1.180e-7 Identity = 28/40 (70.00%), Postives = 32/40 (80.00%), Query Frame = 1
Query: 91 VLDEEAYLESLDKIIERDFFPDLPLVDAQLAYLQAVEKND 210
+LDEEAY+E + KII+RDFFPDL V AQ YL AVEKND
Sbjct: 54 ILDEEAYIEEMGKIIQRDFFPDLEKVKAQNEYLDAVEKND 93
BLAST of mRNA_M-pyrifera_M_contig118737.3856.1 vs. uniprot
Match: UPI001C448A57 (splicing factor ESS-2 homolog isoform X1 n=1 Tax=Homarus americanus TaxID=6706 RepID=UPI001C448A57) HSP 1 Score: 57.8 bits (138), Expect = 1.550e-7 Identity = 31/65 (47.69%), Postives = 46/65 (70.77%), Query Frame = 1
Query: 16 ALVIAKKKAKELKRARKEARKRRQVVLDEEAYLESLDKIIERDFFPDLPLVDAQLAYLQAVEKND 210
AL +A++ + K+ K A +RR+ V+DEE Y++ ++KIIERDFFPDL + +L YL+A E ND
Sbjct: 15 ALQVAEQNVEIFKKPDKPAARRRKKVMDEETYIKEVEKIIERDFFPDLENLKEKLDYLEAKEMND 79 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118737.3856.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig118737.3856.1 >prot_M-pyrifera_M_contig118737.3856.1 ID=prot_M-pyrifera_M_contig118737.3856.1|Name=mRNA_M-pyrifera_M_contig118737.3856.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=104bp PERGAALVIAKKKAKELKRARKEARKRRQVVLDEEAYLESLDKIIERDFFback to top mRNA from alignment at M-pyrifera_M_contig118737:9..320- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig118737.3856.1 ID=mRNA_M-pyrifera_M_contig118737.3856.1|Name=mRNA_M-pyrifera_M_contig118737.3856.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=312bp|location=Sequence derived from alignment at M-pyrifera_M_contig118737:9..320- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig118737:9..320- >mRNA_M-pyrifera_M_contig118737.3856.1 ID=mRNA_M-pyrifera_M_contig118737.3856.1|Name=mRNA_M-pyrifera_M_contig118737.3856.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=624bp|location=Sequence derived from alignment at M-pyrifera_M_contig118737:9..320- (Macrocystis pyrifera P11B4 male)back to top |