mRNA_M-pyrifera_M_contig118695.3848.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig118695.3848.1 vs. uniprot
Match: A0A2T6KAS0_9RHOB (NAD(P)-dependent dehydrogenase (Short-subunit alcohol dehydrogenase family) n=2 Tax=Yoonia sediminilitoris TaxID=1286148 RepID=A0A2T6KAS0_9RHOB) HSP 1 Score: 246 bits (628), Expect = 1.040e-79 Identity = 121/182 (66.48%), Postives = 140/182 (76.92%), Query Frame = 1
Query: 1 RDGAHVVALDNNQKNIQSLEENCGSEFGDRLRIVRQDLADSAGLKQTLASLLDEGSFDIVINNAAIYPSKPFADYSLEEHRAVQAVNVDAALICTAMALPTMRARNWGRIVNISSITFYGGWENLSPYVQSKGALTGLTRAWAREFGKWGITVNAIAPGAFPTDAEKIHPNPEEYAKFVLDH 546
R GA V ++D + L G RL ++ QDLAD+ L+ TL ++ E DI+INNAA+YPSKPF DYSLEE R VQAVNVDAALICTA LP MRA++WGRI+NI+SIT GGWENLSPY+QSKGAL GLTRAWAREFGK+GITVNAIAPGAFPTDAE+IHP PE Y +FVLDH
Sbjct: 31 RAGAEVFSIDRDHGKNAELRAETSDFLGVRLHLIEQDLADTDALRGTLRQIVAEAPIDILINNAAVYPSKPFEDYSLEEQRQVQAVNVDAALICTAEVLPGMRAQSWGRILNITSITLTGGWENLSPYIQSKGALLGLTRAWAREFGKYGITVNAIAPGAFPTDAERIHPEPERYRQFVLDH 212
BLAST of mRNA_M-pyrifera_M_contig118695.3848.1 vs. uniprot
Match: A0A399J0X1_9RHOB (SDR family oxidoreductase n=1 Tax=Pseudopuniceibacterium sediminis TaxID=2211117 RepID=A0A399J0X1_9RHOB) HSP 1 Score: 246 bits (627), Expect = 1.970e-79 Identity = 120/181 (66.30%), Postives = 141/181 (77.90%), Query Frame = 1
Query: 4 DGAHVVALDNNQKNIQSLEENCGSEFGDRLRIVRQDLADSAGLKQTLASLLDEGSFDIVINNAAIYPSKPFADYSLEEHRAVQAVNVDAALICTAMALPTMRARNWGRIVNISSITFYGGWENLSPYVQSKGALTGLTRAWAREFGKWGITVNAIAPGAFPTDAEKIHPNPEEYAKFVLDH 546
+GA V ALD + SL + RL ++ DLAD AGL+ TLA + + D+VINNAAIYPSKPF +++LEEHR V AVNV+AALIC A ALP MRA+ WGR++N++SIT GGWENL+PYVQSKGAL GLTRAWAREFGKWGITVNAIAPGAFPTDAEKIHP+PE Y KFV+DH
Sbjct: 41 EGAEVFALDRDHSKNASLLADTPEAQAARLHLLEIDLADVAGLRATLARITADKPLDVVINNAAIYPSKPFEEFTLEEHRTVHAVNVEAALICMAAALPGMRAQGWGRVINVTSITLTGGWENLTPYVQSKGALLGLTRAWAREFGKWGITVNAIAPGAFPTDAEKIHPDPEGYVKFVMDH 221
BLAST of mRNA_M-pyrifera_M_contig118695.3848.1 vs. uniprot
Match: UPI000EAFE5AC (SDR family oxidoreductase n=1 Tax=Chachezhania antarctica TaxID=2340860 RepID=UPI000EAFE5AC) HSP 1 Score: 245 bits (625), Expect = 3.830e-79 Identity = 119/180 (66.11%), Postives = 140/180 (77.78%), Query Frame = 1
Query: 7 GAHVVALDNNQKNIQSLEENCGSEFGDRLRIVRQDLADSAGLKQTLASLLDEGSFDIVINNAAIYPSKPFADYSLEEHRAVQAVNVDAALICTAMALPTMRARNWGRIVNISSITFYGGWENLSPYVQSKGALTGLTRAWAREFGKWGITVNAIAPGAFPTDAEKIHPNPEEYAKFVLDH 546
GA V ALD + SL E+ + L ++ DLAD+ L+ LA + + D+VINNAAIYPSKPF ++SL+EHRAV AVNV+AALICT ALP MRA+ WGR++NI+SIT GGWENL+PYVQSKGAL GLTRAWAREFGKWGITVNAIAPGAFPTDAEKIHP+PE Y +FVLDH
Sbjct: 41 GAEVFALDRDHTKNLSLLEDTPEDLASLLHLLEMDLADTKALEAKLAEITADKPLDVVINNAAIYPSKPFEEFSLDEHRAVHAVNVEAALICTKAALPGMRAQGWGRVINITSITLTGGWENLAPYVQSKGALMGLTRAWAREFGKWGITVNAIAPGAFPTDAEKIHPDPEGYTRFVLDH 220
BLAST of mRNA_M-pyrifera_M_contig118695.3848.1 vs. uniprot
Match: A0A2U2DR07_9HYPH (Oxidoreductase n=2 Tax=Rhizobium TaxID=379 RepID=A0A2U2DR07_9HYPH) HSP 1 Score: 244 bits (623), Expect = 8.490e-79 Identity = 122/183 (66.67%), Postives = 142/183 (77.60%), Query Frame = 1
Query: 1 RDGAHVVALDNNQKNIQSLEENCGSEFGDRLRIVRQDLADSAGLKQTLASLL-DEGSFDIVINNAAIYPSKPFADYSLEEHRAVQAVNVDAALICTAMALPTMRARNWGRIVNISSITFYGGWENLSPYVQSKGALTGLTRAWAREFGKWGITVNAIAPGAFPTDAEKIHPNPEEYAKFVLDH 546
R GA VVA+DNN + L E E L + DL+D A L+Q L ++ D G FD+VINNAAIYPSKPF DY++EE +AVQ VNVDA ++C +ALP MRA NWGRIVNI+S+TFYGGW NLSPYVQSKGAL GLTR WAREFG +GITVNAI+PGAFPTDAEKIHP+PE YA+FVLDH
Sbjct: 41 RAGARVVAVDNNPEKTAGLLEAAARENLSGLTVKAIDLSDLAALRQELEAVAKDVGGFDVVINNAAIYPSKPFEDYTIEEMQAVQRVNVDAGIVCVQVALPHMRANNWGRIVNIASVTFYGGWANLSPYVQSKGALVGLTRGWAREFGAYGITVNAISPGAFPTDAEKIHPDPEGYARFVLDH 223
BLAST of mRNA_M-pyrifera_M_contig118695.3848.1 vs. uniprot
Match: A0A1S2DES9_9GAMM (Oxidoreductase n=1 Tax=Salinicola sp. MIT1003 TaxID=1882734 RepID=A0A1S2DES9_9GAMM) HSP 1 Score: 241 bits (614), Expect = 1.680e-77 Identity = 117/180 (65.00%), Postives = 137/180 (76.11%), Query Frame = 1
Query: 7 GAHVVALDNNQKNIQSLEENCGSEFGDRLRIVRQDLADSAGLKQTLASLLDEGSFDIVINNAAIYPSKPFADYSLEEHRAVQAVNVDAALICTAMALPTMRARNWGRIVNISSITFYGGWENLSPYVQSKGALTGLTRAWAREFGKWGITVNAIAPGAFPTDAEKIHPNPEEYAKFVLDH 546
GA V+A+DN L RL+++ DLAD A L + L L+ + + DIVINNAAIYPSKPF DYSLEE R V AVNV++AL+CT ALP MR + WGRI+N+SSIT GGWE+LSPYVQSKGAL GLTRAWAREFGKWGIT NAI+PGAFPTDAEKIHP+PE+Y +FVLDH
Sbjct: 39 GAEVIAIDNAPDKAAKLHAAVPDAHRKRLKLLEIDLADHANLSRRLQELVQDRALDIVINNAAIYPSKPFEDYSLEEMRTVHAVNVESALVCTQAALPGMRTQGWGRIINVSSITLSGGWEHLSPYVQSKGALVGLTRAWAREFGKWGITCNAISPGAFPTDAEKIHPDPEQYNRFVLDH 218
BLAST of mRNA_M-pyrifera_M_contig118695.3848.1 vs. uniprot
Match: A0A6M0QWL8_9RHOB (SDR family oxidoreductase n=1 Tax=Tabrizicola oligotrophica TaxID=2710650 RepID=A0A6M0QWL8_9RHOB) HSP 1 Score: 240 bits (613), Expect = 2.540e-77 Identity = 114/180 (63.33%), Postives = 143/180 (79.44%), Query Frame = 1
Query: 7 GAHVVALDNNQKNIQSLEENCGSEFGDRLRIVRQDLADSAGLKQTLASLLDEGSFDIVINNAAIYPSKPFADYSLEEHRAVQAVNVDAALICTAMALPTMRARNWGRIVNISSITFYGGWENLSPYVQSKGALTGLTRAWAREFGKWGITVNAIAPGAFPTDAEKIHPNPEEYAKFVLDH 546
GA V ++D + + +SL + RL ++ +DL D+ ++ L ++ G+ +++INNAAIYP+KPF D++LEE RAVQAVNVDAAL+CTA LP MRA+NWGRI+N++SIT GGWENLSPYVQSKGAL GLTRAWAREFGKWGITVNAIAPGAFPTDAE+IHP+PE Y +FVLDH
Sbjct: 44 GAEVFSIDRDHAHNESLRSEAHAA---RLHLIERDLTDTDAVRACLRDIVKGGAINVLINNAAIYPTKPFEDFTLEEQRAVQAVNVDAALVCTAEVLPAMRAQNWGRIINVTSITLGGGWENLSPYVQSKGALLGLTRAWAREFGKWGITVNAIAPGAFPTDAERIHPDPEAYNRFVLDH 220
BLAST of mRNA_M-pyrifera_M_contig118695.3848.1 vs. uniprot
Match: A0A135HNT5_9HYPH (Oxidoreductase n=3 Tax=Phyllobacteriaceae TaxID=69277 RepID=A0A135HNT5_9HYPH) HSP 1 Score: 240 bits (612), Expect = 2.610e-77 Identity = 122/183 (66.67%), Postives = 140/183 (76.50%), Query Frame = 1
Query: 1 RDGAHVVALDNNQKNIQSLEENCGSEFGDRLRIVRQDLADSAGLKQTLASLLDE-GSFDIVINNAAIYPSKPFADYSLEEHRAVQAVNVDAALICTAMALPTMRARNWGRIVNISSITFYGGWENLSPYVQSKGALTGLTRAWAREFGKWGITVNAIAPGAFPTDAEKIHPNPEEYAKFVLDH 546
R GA VVA DNN + L E +L I DL+D A L++ L ++ E G FDIVINNAAIYPSKPF DYSLEE +AVQ VNVDA ++C +ALP MR + WGRI+NI+S+TFYGGW NLSPYVQSKGAL GLTRAWAREFG +GITVNAIAPGAFPTDAEKIHP+PE Y +FVLDH
Sbjct: 28 RAGAKVVAADNNPAKVADLSGKAEQEGLRKLMIRTIDLSDLATLRRELEAVSAEVGGFDIVINNAAIYPSKPFEDYSLEEMQAVQRVNVDAGIVCVQVALPHMRKKGWGRIINIASVTFYGGWTNLSPYVQSKGALVGLTRAWAREFGAYGITVNAIAPGAFPTDAEKIHPDPEGYTRFVLDH 210
BLAST of mRNA_M-pyrifera_M_contig118695.3848.1 vs. uniprot
Match: A0A7W6DBC6_9HYPH (NAD(P)-dependent dehydrogenase (Short-subunit alcohol dehydrogenase family) n=2 Tax=Rhizobium TaxID=379 RepID=A0A7W6DBC6_9HYPH) HSP 1 Score: 240 bits (613), Expect = 2.800e-77 Identity = 119/183 (65.03%), Postives = 142/183 (77.60%), Query Frame = 1
Query: 1 RDGAHVVALDNNQKNIQSLEENCGSEFGDRLRIVRQDLADSAGLKQTLASLLDE-GSFDIVINNAAIYPSKPFADYSLEEHRAVQAVNVDAALICTAMALPTMRARNWGRIVNISSITFYGGWENLSPYVQSKGALTGLTRAWAREFGKWGITVNAIAPGAFPTDAEKIHPNPEEYAKFVLDH 546
R GA VVA+DN+++ QSL + E L + DL+D +GL+ L + DE G FD+VINNAAIYPSKPF DYS+E+ + VQ VNVDA ++C ALP MR + WGRIVNI+S+TFYGGW NLSPYVQSKGAL GLTRAWAREFG +GITVNA+APGAFPTDAEKIHP+PE Y +FVLDH
Sbjct: 41 RAGAKVVAIDNDERKTQSLRDAVTREGLAGLTVRAIDLSDLSGLRAELDRVADEVGGFDVVINNAAIYPSKPFEDYSIEDFQMVQRVNVDAGIVCVQAALPHMRKQGWGRIVNIASVTFYGGWANLSPYVQSKGALVGLTRAWAREFGAYGITVNAVAPGAFPTDAEKIHPDPEGYTRFVLDH 223
BLAST of mRNA_M-pyrifera_M_contig118695.3848.1 vs. uniprot
Match: A0A387G003_9HYPH (SDR family oxidoreductase n=2 Tax=Rhizobium TaxID=379 RepID=A0A387G003_9HYPH) HSP 1 Score: 239 bits (609), Expect = 7.210e-77 Identity = 119/183 (65.03%), Postives = 141/183 (77.05%), Query Frame = 1
Query: 1 RDGAHVVALDNNQKNIQSLEENCGSEFGDRLRIVRQDLADSAGLKQTLASLLDE-GSFDIVINNAAIYPSKPFADYSLEEHRAVQAVNVDAALICTAMALPTMRARNWGRIVNISSITFYGGWENLSPYVQSKGALTGLTRAWAREFGKWGITVNAIAPGAFPTDAEKIHPNPEEYAKFVLDH 546
R GA VVA+DNN I +L+ E L + DL+D A L+ L ++ E G FD+VINNAAIYPSKPF DY+LEEH+AVQ VNVDA ++C +ALP MRA+ WGRI+NI+S+T YGGW NLSPYVQSKGAL GLTRAWAREFG +GITVNA+APGAFPTDAEKIHP+P Y +FVLDH
Sbjct: 27 RAGARVVAIDNNPDKIANLKALAEKEGLKGLAVKALDLSDLAHLRHQLETISAEVGGFDVVINNAAIYPSKPFEDYTLEEHQAVQRVNVDAGIVCVQVALPHMRAKGWGRIINIASVTAYGGWANLSPYVQSKGALIGLTRAWAREFGAYGITVNAVAPGAFPTDAEKIHPDPGGYTRFVLDH 209
BLAST of mRNA_M-pyrifera_M_contig118695.3848.1 vs. uniprot
Match: A0A1Y5RP30_9RHOB (Pyridoxal 4-dehydrogenase n=1 Tax=Pacificibacter marinus TaxID=658057 RepID=A0A1Y5RP30_9RHOB) HSP 1 Score: 238 bits (608), Expect = 1.410e-76 Identity = 116/180 (64.44%), Postives = 135/180 (75.00%), Query Frame = 1
Query: 7 GAHVVALDNNQKNIQSLEENCGSEFGDRLRIVRQDLADSAGLKQTLASLLDEGSFDIVINNAAIYPSKPFADYSLEEHRAVQAVNVDAALICTAMALPTMRARNWGRIVNISSITFYGGWENLSPYVQSKGALTGLTRAWAREFGKWGITVNAIAPGAFPTDAEKIHPNPEEYAKFVLDH 546
GA V A+D + + L + E +RL ++ D+ D L +TL + E D+VINNAAIYPSKPF D+SL+EHRAV AVNV+AALIC ALP MR + WGRI+N++SIT GGWENLSPYVQSKGAL GLTRAWAREFGKWGIT NAIAPGAFPTDAEKIHP+PE Y FVLDH
Sbjct: 40 GATVFAIDRDHSKNEFLLSDTPPELAERLHLIELDMTDMDALTKTLQDITAEAPIDVVINNAAIYPSKPFEDFSLDEHRAVHAVNVEAALICVKEALPGMRDQGWGRIINVTSITLSGGWENLSPYVQSKGALLGLTRAWAREFGKWGITSNAIAPGAFPTDAEKIHPDPEGYKAFVLDH 219 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118695.3848.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig118695.3848.1 >prot_M-pyrifera_M_contig118695.3848.1 ID=prot_M-pyrifera_M_contig118695.3848.1|Name=mRNA_M-pyrifera_M_contig118695.3848.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=182bp RDGAHVVALDNNQKNIQSLEENCGSEFGDRLRIVRQDLADSAGLKQTLASback to top mRNA from alignment at M-pyrifera_M_contig118695:1..546- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig118695.3848.1 ID=mRNA_M-pyrifera_M_contig118695.3848.1|Name=mRNA_M-pyrifera_M_contig118695.3848.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=546bp|location=Sequence derived from alignment at M-pyrifera_M_contig118695:1..546- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig118695:1..546- >mRNA_M-pyrifera_M_contig118695.3848.1 ID=mRNA_M-pyrifera_M_contig118695.3848.1|Name=mRNA_M-pyrifera_M_contig118695.3848.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1092bp|location=Sequence derived from alignment at M-pyrifera_M_contig118695:1..546- (Macrocystis pyrifera P11B4 male)back to top |