mRNA_M-pyrifera_M_contig118589.3839.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig118589.3839.1 vs. uniprot
Match: A0A7K2BS80_9ACTN (ATP-binding cassette domain-containing protein (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2BS80_9ACTN) HSP 1 Score: 194 bits (494), Expect = 3.080e-61 Identity = 96/135 (71.11%), Postives = 113/135 (83.70%), Query Frame = 1
Query: 22 IPSPTTRPNNLAAGAVGVSKTYGSGDTIVRALDNIDVDFVAGHFTAIMGPSGSGKSTLMHCLAGLDNVTSGEILLGDTDLATLSERELTLLRRDRVGFIFQAFNLVPTLSALENITLPMDLAGVKPDQAWLEQVI 426
+ S T+ +AA AV SK YGSGDT VRALD IDV F G FTAIMGPSGSGKSTLMHC+AGLD VTSG++++GDTDL TLSER+LTLLRRD VGF+FQA+NLVPTL+A+ENITLPMDLAG K D AW+++V+
Sbjct: 26 VTSSPTQALAVAARAVAASKIYGSGDTEVRALDAIDVAFDQGRFTAIMGPSGSGKSTLMHCMAGLDTVTSGQVIIGDTDLTTLSERDLTLLRRDSVGFVFQAYNLVPTLTAIENITLPMDLAGAKGDTAWVDEVV 160
BLAST of mRNA_M-pyrifera_M_contig118589.3839.1 vs. uniprot
Match: A0A2D8LV77_9ACTN (Peptide ABC transporter ATP-binding protein n=8 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8LV77_9ACTN) HSP 1 Score: 196 bits (497), Expect = 1.340e-60 Identity = 95/125 (76.00%), Postives = 109/125 (87.20%), Query Frame = 1
Query: 52 LAAGAVGVSKTYGSGDTIVRALDNIDVDFVAGHFTAIMGPSGSGKSTLMHCLAGLDNVTSGEILLGDTDLATLSERELTLLRRDRVGFIFQAFNLVPTLSALENITLPMDLAGVKPDQAWLEQVI 426
LAA AVG +K YGSGDT VRALD +DV F G FTAIMGPSGSGKSTLMHC+AGLD++T GE+ +G+T L+TLSE++LTLLRRD VGFIFQAFNLVPTLSA+ENITLPMDLAG PDQ W++QVI
Sbjct: 9 LAARAVGAAKIYGSGDTEVRALDGVDVTFNRGEFTAIMGPSGSGKSTLMHCMAGLDDLTDGEVFIGETALSTLSEKDLTLLRRDNVGFIFQAFNLVPTLSAIENITLPMDLAGKTPDQGWVDQVI 133
BLAST of mRNA_M-pyrifera_M_contig118589.3839.1 vs. uniprot
Match: A0A6B0ZG18_9ACTN (ABC transporter ATP-binding protein n=9 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B0ZG18_9ACTN) HSP 1 Score: 196 bits (499), Expect = 1.500e-60 Identity = 97/140 (69.29%), Postives = 116/140 (82.86%), Query Frame = 1
Query: 7 VLDPPIPSPTTRPNNLAAGAVGVSKTYGSGDTIVRALDNIDVDFVAGHFTAIMGPSGSGKSTLMHCLAGLDNVTSGEILLGDTDLATLSERELTLLRRDRVGFIFQAFNLVPTLSALENITLPMDLAGVKPDQAWLEQVI 426
+L P+ S T+ +AA AV SK YGSGDT VRALD IDV F G FTAIMGPSGSGKSTLMHC+AGLD VTSG++++GDTDL TLSE++LTLLRRD VGF+FQA+NLVPTL+A+ENITLPMDLAG K D AW+++V+
Sbjct: 21 LLGEPVTSSPTQALAVAAQAVAASKIYGSGDTEVRALDAIDVAFEQGRFTAIMGPSGSGKSTLMHCMAGLDTVTSGQVIIGDTDLTTLSEKDLTLLRRDNVGFVFQAYNLVPTLTAIENITLPMDLAGEKGDTAWVDEVV 160
BLAST of mRNA_M-pyrifera_M_contig118589.3839.1 vs. uniprot
Match: UPI0018F5C5A8 (ABC transporter ATP-binding protein n=2 Tax=Antrihabitans TaxID=2799491 RepID=UPI0018F5C5A8) HSP 1 Score: 195 bits (496), Expect = 2.990e-60 Identity = 91/125 (72.80%), Postives = 110/125 (88.00%), Query Frame = 1
Query: 52 LAAGAVGVSKTYGSGDTIVRALDNIDVDFVAGHFTAIMGPSGSGKSTLMHCLAGLDNVTSGEILLGDTDLATLSERELTLLRRDRVGFIFQAFNLVPTLSALENITLPMDLAGVKPDQAWLEQVI 426
+AA A+ V KTYGSGDT VRALD + DFV G FTAIMGPSGSGKSTLMHCLAGLDN TSG +L+GDT+L +LS++++T+LRRDR+GF+FQAFNLVPTL+ALENITLP+D+AG KPD+ WL+ VI
Sbjct: 23 IAARAIDVVKTYGSGDTQVRALDGVSADFVRGEFTAIMGPSGSGKSTLMHCLAGLDNATSGSVLIGDTELMSLSDKQMTMLRRDRIGFVFQAFNLVPTLTALENITLPLDIAGRKPDKEWLDTVI 147
BLAST of mRNA_M-pyrifera_M_contig118589.3839.1 vs. uniprot
Match: A0A662E956_9ACTN (ABC transporter ATP-binding protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A662E956_9ACTN) HSP 1 Score: 194 bits (492), Expect = 9.490e-60 Identity = 95/140 (67.86%), Postives = 116/140 (82.86%), Query Frame = 1
Query: 7 VLDPPIPSPTTRPNNLAAGAVGVSKTYGSGDTIVRALDNIDVDFVAGHFTAIMGPSGSGKSTLMHCLAGLDNVTSGEILLGDTDLATLSERELTLLRRDRVGFIFQAFNLVPTLSALENITLPMDLAGVKPDQAWLEQVI 426
+LDPP +P T N +AA A G +KTYG GDT V ALDN+DVDF AG FTAIMGPSGSGKSTLMHC+AGLD+++SG +GD D+A SE++LT LRRDR+GF+FQAFNLVPTL+A+ENITLPMDLAG +PD+ WL+ V+
Sbjct: 4 LLDPP--NPQTE-NAIAASARGATKTYGMGDTEVLALDNVDVDFAAGQFTAIMGPSGSGKSTLMHCMAGLDSLSSGSAFIGDIDIAAASEKQLTRLRRDRLGFVFQAFNLVPTLTAIENITLPMDLAGNRPDKEWLDNVV 140
BLAST of mRNA_M-pyrifera_M_contig118589.3839.1 vs. uniprot
Match: A0A5Q2RR31_9ACTN (ATP-binding cassette domain-containing protein n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RR31_9ACTN) HSP 1 Score: 194 bits (492), Expect = 1.070e-59 Identity = 96/135 (71.11%), Postives = 109/135 (80.74%), Query Frame = 1
Query: 25 PSPTTRP-NNLAAGAVGVSKTYGSGDTIVRALDNIDVDFVAGHFTAIMGPSGSGKSTLMHCLAGLDNVTSGEILLGDTDLATLSERELTLLRRDRVGFIFQAFNLVPTLSALENITLPMDLAGVKPDQAWLEQVI 426
P+P P AA AV KTYGSGDT VRALD IDV+F FTAIMGPSGSGKSTLMHCLAGLD +TSG++ +GDTDL TLSE+ LT LRRD+VGF+FQAFNL+PTLSA+ENITLPM LAG KPDQ W++ VI
Sbjct: 8 PTPAAGPARRAAARAVAARKTYGSGDTEVRALDGIDVEFERARFTAIMGPSGSGKSTLMHCLAGLDTLTSGQVFIGDTDLTTLSEKHLTTLRRDKVGFVFQAFNLIPTLSAIENITLPMSLAGRKPDQDWVDDVI 142
BLAST of mRNA_M-pyrifera_M_contig118589.3839.1 vs. uniprot
Match: A0A7X6ASF0_9ACTN (ATP-binding cassette domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X6ASF0_9ACTN) HSP 1 Score: 193 bits (491), Expect = 1.090e-59 Identity = 95/132 (71.97%), Postives = 111/132 (84.09%), Query Frame = 1
Query: 31 PTTRPNNLAAGAVGVSKTYGSGDTIVRALDNIDVDFVAGHFTAIMGPSGSGKSTLMHCLAGLDNVTSGEILLGDTDLATLSERELTLLRRDRVGFIFQAFNLVPTLSALENITLPMDLAGVKPDQAWLEQVI 426
PTT +AA AV +K YG GDT VRALD ID +F G FTAIMGPSGSGKSTLMHCLAGLD +TSG++ +GD DL+ LSER+LTLLRRD+VGF+FQAFNLVPTLSA+ENITLP DLAG++PD AWL++VI
Sbjct: 6 PTTA---IAARAVAATKIYGEGDTEVRALDGIDAEFARGRFTAIMGPSGSGKSTLMHCLAGLDTLTSGKVFIGDVDLSLLSERDLTLLRRDKVGFVFQAFNLVPTLSAIENITLPTDLAGLEPDGAWLDEVI 134
BLAST of mRNA_M-pyrifera_M_contig118589.3839.1 vs. uniprot
Match: A0A6I2ZXA1_9ACTN (ATP-binding cassette domain-containing protein n=3 Tax=root TaxID=1 RepID=A0A6I2ZXA1_9ACTN) HSP 1 Score: 191 bits (484), Expect = 1.220e-58 Identity = 91/124 (73.39%), Postives = 106/124 (85.48%), Query Frame = 1
Query: 55 AAGAVGVSKTYGSGDTIVRALDNIDVDFVAGHFTAIMGPSGSGKSTLMHCLAGLDNVTSGEILLGDTDLATLSERELTLLRRDRVGFIFQAFNLVPTLSALENITLPMDLAGVKPDQAWLEQVI 426
AAGA+ SK YG D+ VRALD++ VDF G FTAIMGPSGSGKSTLMHCLAGLD +TSG +L+GDTDLA L +++LT LRR++VGFIFQA+NL+PTLSALENITLPMDL GVKPDQ WL+ VI
Sbjct: 9 AAGAINASKIYGKDDSEVRALDDVTVDFALGQFTAIMGPSGSGKSTLMHCLAGLDALTSGRVLIGDTDLAQLDDKQLTSLRREKVGFIFQAYNLIPTLSALENITLPMDLGGVKPDQEWLDTVI 132
BLAST of mRNA_M-pyrifera_M_contig118589.3839.1 vs. uniprot
Match: UPI0018F6606F (ABC transporter ATP-binding protein n=1 Tax=Antrihabitans sp. YC2-6 TaxID=2799498 RepID=UPI0018F6606F) HSP 1 Score: 190 bits (483), Expect = 2.190e-58 Identity = 91/127 (71.65%), Postives = 107/127 (84.25%), Query Frame = 1
Query: 46 NNLAAGAVGVSKTYGSGDTIVRALDNIDVDFVAGHFTAIMGPSGSGKSTLMHCLAGLDNVTSGEILLGDTDLATLSERELTLLRRDRVGFIFQAFNLVPTLSALENITLPMDLAGVKPDQAWLEQVI 426
+ LAA A+ V KTYGSGDT VRALD + DFV G FTAIMGPSGSGKSTLMHCLAGLD TSG +L+GDT+L TLS++++T LRRDRVGF+FQAFNLVPTL+ALENITLP+D+AG K D WL+ V+
Sbjct: 13 HTLAARAIDVVKTYGSGDTQVRALDGVSADFVKGEFTAIMGPSGSGKSTLMHCLAGLDTATSGSVLIGDTELTTLSDKQMTKLRRDRVGFVFQAFNLVPTLTALENITLPLDIAGRKADAEWLDTVL 139
BLAST of mRNA_M-pyrifera_M_contig118589.3839.1 vs. uniprot
Match: UPI001E2E6EFC (ABC transporter ATP-binding protein n=2 Tax=Streptomyces TaxID=1883 RepID=UPI001E2E6EFC) HSP 1 Score: 191 bits (486), Expect = 2.280e-58 Identity = 91/124 (73.39%), Postives = 108/124 (87.10%), Query Frame = 1
Query: 55 AAGAVGVSKTYGSGDTIVRALDNIDVDFVAGHFTAIMGPSGSGKSTLMHCLAGLDNVTSGEILLGDTDLATLSERELTLLRRDRVGFIFQAFNLVPTLSALENITLPMDLAGVKPDQAWLEQVI 426
AA A G++K YGSG+T V ALD++DVD G FTA+MGPSGSGKSTLMHCLAGLDNV++G++ LGDT++ L ERELT LRRDRVGF+FQ+FNL+PTLSALEN+TLPMD+AG KPDQAWLE VI
Sbjct: 19 AARARGLTKAYGSGETTVLALDSVDVDIARGRFTAVMGPSGSGKSTLMHCLAGLDNVSAGQVWLGDTEITGLKERELTQLRRDRVGFMFQSFNLIPTLSALENMTLPMDIAGRKPDQAWLEHVI 142 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118589.3839.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig118589.3839.1 >prot_M-pyrifera_M_contig118589.3839.1 ID=prot_M-pyrifera_M_contig118589.3839.1|Name=mRNA_M-pyrifera_M_contig118589.3839.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=142bp MTVLDPPIPSPTTRPNNLAAGAVGVSKTYGSGDTIVRALDNIDVDFVAGHback to top mRNA from alignment at M-pyrifera_M_contig118589:123..548+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig118589.3839.1 ID=mRNA_M-pyrifera_M_contig118589.3839.1|Name=mRNA_M-pyrifera_M_contig118589.3839.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=426bp|location=Sequence derived from alignment at M-pyrifera_M_contig118589:123..548+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig118589:123..548+ >mRNA_M-pyrifera_M_contig118589.3839.1 ID=mRNA_M-pyrifera_M_contig118589.3839.1|Name=mRNA_M-pyrifera_M_contig118589.3839.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=852bp|location=Sequence derived from alignment at M-pyrifera_M_contig118589:123..548+ (Macrocystis pyrifera P11B4 male)back to top |