mRNA_M-pyrifera_M_contig1184.3811.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig1184.3811.1 vs. uniprot
Match: D7G556_ECTSI (Dimethylmenaquinone methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G556_ECTSI) HSP 1 Score: 238 bits (608), Expect = 5.400e-78 Identity = 121/139 (87.05%), Postives = 128/139 (92.09%), Query Frame = 1
Query: 1 GGQIAVAGELFSAEAKRRSLAGMLIEGSCRDTETIARLRFPVYCRYVNPMAGRCDILDRELMQVPVVIGGVTINPGDVIMGDDDGVVVLGSDLDKIQDTAIKASEILRNERAVLTEVLDNNRCLLEFMNLMDSHKGNSP 417
G IAVAGELFSAEAKRRSLAGMLIEG+CRDTETIARLRFPVYCR+VNPMAGRC LDR+LMQVPV IGGV INPGDVIMGDDDGVVVLG+DLDKIQ TA+ ASEILRNE AVLTEVLDNNRCLLEFM++MDSHK SP
Sbjct: 72 GSNIAVAGELFSAEAKRRSLAGMLIEGACRDTETIARLRFPVYCRFVNPMAGRCITLDRDLMQVPVTIGGVEINPGDVIMGDDDGVVVLGNDLDKIQKTALAASEILRNESAVLTEVLDNNRCLLEFMDMMDSHKKVSP 210
BLAST of mRNA_M-pyrifera_M_contig1184.3811.1 vs. uniprot
Match: A0A6H5L9B9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9B9_9PHAE) HSP 1 Score: 238 bits (608), Expect = 1.520e-72 Identity = 121/139 (87.05%), Postives = 128/139 (92.09%), Query Frame = 1
Query: 1 GGQIAVAGELFSAEAKRRSLAGMLIEGSCRDTETIARLRFPVYCRYVNPMAGRCDILDRELMQVPVVIGGVTINPGDVIMGDDDGVVVLGSDLDKIQDTAIKASEILRNERAVLTEVLDNNRCLLEFMNLMDSHKGNSP 417
G IAVAGELFSAEAKRRSLAGMLIEG+CRDTETIARLRFPVYCR+VNPMAGRC LDR+LMQVPV IGGV INPGDVIMGDDDGVVVLG+DLDKIQ TA+ ASEILRNE AVLTEVLDNNRCLLEFM++MDSHK SP
Sbjct: 554 GSNIAVAGELFSAEAKRRSLAGMLIEGACRDTETIARLRFPVYCRFVNPMAGRCITLDRDLMQVPVTIGGVKINPGDVIMGDDDGVVVLGNDLDKIQKTALAASEILRNESAVLTEVLDNNRCLLEFMDMMDSHKQVSP 692
BLAST of mRNA_M-pyrifera_M_contig1184.3811.1 vs. uniprot
Match: A0A835YLR9_9STRA (Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLR9_9STRA) HSP 1 Score: 160 bits (404), Expect = 2.920e-46 Identity = 77/136 (56.62%), Postives = 104/136 (76.47%), Query Frame = 1
Query: 1 GGQIAVAGELFSAEAKRRSLAGMLIEGSCRDTETIARLRFPVYCRYVNPMAGRCDILDRELMQVPVVIGGVTINPGDVIMGDDDGVVVLGSDLDKIQDTAIKASEILRNERAVLTEVLDNNRCLLEFMNLMDSHKG 408
G ++AVAGELF+AEA+RR LAG++I+G+CRDT T+ RL FP Y R V+PMAG C LD+ L+ VPV + GVT+ GDV+ GD DGVV LG D+D ++ A +A+EI ++ER VL EVL+++RCL EFM ++DSH
Sbjct: 127 GSRVAVAGELFTAEARRRQLAGIIIDGACRDTPTVCRLDFPFYSRSVSPMAGVCVTLDQSLLGVPVTVSGVTVANGDVLFGDQDGVVNLGQDMDNVELLARRAAEIRQHERLVLKEVLEHDRCLAEFMTILDSHNA 262
BLAST of mRNA_M-pyrifera_M_contig1184.3811.1 vs. uniprot
Match: A0A3D5DEW3_9GAMM (Dimethylmenaquinone methyltransferase (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DEW3_9GAMM) HSP 1 Score: 96.7 bits (239), Expect = 4.280e-22 Identity = 57/132 (43.18%), Postives = 79/132 (59.85%), Query Frame = 1
Query: 7 QIAVAGELFSAEAKRRSLAGMLIEGSCRDTETIARLRFPVYCRYVNPMAGRCDILDRELMQVPVVIGGVTINPGDVIMGDDDGVVVLGSDLDKIQDTAIKASEILRNERAVLTEVLDNNRCLLEFMNLMDSH 402
Q+AV GELFS EA R L G++I+G CRD TI L PVY R +P++G + L Q+ + GGV +NPGDV+ GDDDG++V GS +D++ A I E+AV+ E L N LL +N + +
Sbjct: 78 QVAVVGELFSLEAARAGLGGIIIDGLCRDLTTIRTLDMPVYARGSSPVSGTTNTLGER--QIKIDCGGVEVNPGDVVFGDDDGIIV-GS-IDELAALIPSAETIKSTEQAVI-EKLANGTSLLSLLNFAEHY 204
BLAST of mRNA_M-pyrifera_M_contig1184.3811.1 vs. uniprot
Match: A0A2E7NNI7_9PLAN (Dimethylmenaquinone methyltransferase n=3 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7NNI7_9PLAN) HSP 1 Score: 96.3 bits (238), Expect = 7.310e-22 Identity = 51/129 (39.53%), Postives = 81/129 (62.79%), Query Frame = 1
Query: 1 GGQIAVAGELFSAEAKRRSLAGMLIEGSCRDTETIARLRFPVYCRYVNPMAGRCDILDRELMQVPVVIGGVTINPGDVIMGDDDGVVVLGSDLDKIQDTAIKASEILRNERAVLTEVLDNNRCLLEFMN 387
G AV+G LF EA R+ LAG++++G CRDT TI +L FP Y R P AG L + Q+P+ GGVT+NPGD++ GDDDG+V+ S+ ++ D A+ +E +++ +V+ +++ L+ +N
Sbjct: 86 GSDRAVSGSLFPTEAIRKGLAGIVVDGPCRDTRTIRQLDFPYYARSHTPYAGTTAKLGQT--QIPITCGGVTVNPGDILFGDDDGLVIATSE--ELAD-ALPIAETIQHTESVMIGKMNDGTSFLDMLN 209
BLAST of mRNA_M-pyrifera_M_contig1184.3811.1 vs. uniprot
Match: A0A495YYZ7_9BACT (Dimethylmenaquinone methyltransferase n=2 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A495YYZ7_9BACT) HSP 1 Score: 95.5 bits (236), Expect = 1.450e-21 Identity = 59/134 (44.03%), Postives = 80/134 (59.70%), Query Frame = 1
Query: 1 GGQIAVAGELFSAEAKRRSLAGMLIEGSCRDTETIARLRFPVYCRYVNPMAGRCDILDRELMQVPVVIGGVTINPGDVIMGDDDGVVVLGSDLDKIQDTAIKASEILRNERAVLTEVLDNNRCLLEFMNLMDSH 402
G AVAGELF EA R+ LAG++I+G CRDT+TI L P Y R NP+AG + + + +P GGV +NPGD+I GDDDG+VV GS +D++ A EI R E +L E + L E +N + +
Sbjct: 86 GSHRAVAGELFPTEAARKGLAGIVIDGPCRDTKTIRTLNVPYYARSFNPIAGTTHKIYKTQISIPC--GGVIVNPGDIIFGDDDGLVV-GS-IDELAAAIPIAEEIQRKEDQML-EQMAAGVSLFEMLNFEEHY 214
BLAST of mRNA_M-pyrifera_M_contig1184.3811.1 vs. uniprot
Match: A0A846NRI4_9ARCH (RraA family protein n=1 Tax=Candidatus Aenigmarchaeota archaeon TaxID=2093792 RepID=A0A846NRI4_9ARCH) HSP 1 Score: 94.7 bits (234), Expect = 2.320e-21 Identity = 53/135 (39.26%), Postives = 85/135 (62.96%), Query Frame = 1
Query: 1 GGQIAVAGELFSAEAKRRSLAGMLIEGSCRDTETIARLRFPVYCRYVNPMAGRCDILDRELMQVPVVIGGVTINPGDVIMGDDDGVVVLGSD-LDKIQDTAIKASEILRNERAVLTEVLDNNRCLLEFMNLMDSH 402
G +IA GELF+ EA+R+ LAG++++G+CRD + I + FPVY RY+ P+AG + Q V GGV+++P D+I+GDDDG++V+ + ++I DTA I E+ V+ E ++ + L E +N D +
Sbjct: 76 GDKIAFVGELFALEAQRKKLAGIVVDGACRDIKGIRNINFPVYSRYITPIAGTSSRIFPT--QEKVKCGGVSVSPRDIIVGDDDGIIVMSEEEANEILDTAQNIQMI---EKKVI-EKIEAGKSLTELLNFFDHY 204
BLAST of mRNA_M-pyrifera_M_contig1184.3811.1 vs. uniprot
Match: A0A3D1DF23_9PLAN (Dimethylmenaquinone methyltransferase n=2 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3D1DF23_9PLAN) HSP 1 Score: 94.0 bits (232), Expect = 5.660e-21 Identity = 56/134 (41.79%), Postives = 76/134 (56.72%), Query Frame = 1
Query: 1 GGQIAVAGELFSAEAKRRSLAGMLIEGSCRDTETIARLRFPVYCRYVNPMAGRCDILDRELMQVPVVIGGVTINPGDVIMGDDDGVVVLGSDLDKIQDTAIKASEILRNERAVLTEVLDNNRCLLEFMNLMDSH 402
G AV+G LF EA R+ LAG++++G CRDT I L P Y R P +G L QVPV GGVT+NPGD++ GDDDG+V+ + ++++ A EI R E +L + LLE MN D+H
Sbjct: 86 GSDRAVSGSLFPTEAIRKGLAGIVVDGPCRDTRAIRTLELPYYARSFTPYSGTTSNLGET--QVPVTCGGVTVNPGDILFGDDDGLVI--ATVEELAAALPIAEEIQRKEEILLGRMASGTS-LLEMMNF-DAH 213
BLAST of mRNA_M-pyrifera_M_contig1184.3811.1 vs. uniprot
Match: A0A3B8M6Q8_9PLAN (Dimethylmenaquinone methyltransferase n=2 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3B8M6Q8_9PLAN) HSP 1 Score: 93.6 bits (231), Expect = 7.960e-21 Identity = 56/134 (41.79%), Postives = 79/134 (58.96%), Query Frame = 1
Query: 1 GGQIAVAGELFSAEAKRRSLAGMLIEGSCRDTETIARLRFPVYCRYVNPMAGRCDILDRELMQVPVVIGGVTINPGDVIMGDDDGVVVLGSDLDKIQDTAIKASEILRNERAVLTEVLDNNRCLLEFMNLMDSH 402
G AV+G LF EA R+ LAG++++G CRDT TI L P Y R + AG IL + QVPV GGVT++PGD++ GDDDG+V+ + +D++ A EI + E +L + LLE +N +SH
Sbjct: 86 GSNKAVSGGLFPTEATRKGLAGIVVDGPCRDTRTIRALELPYYARSFSSYAGTTTILGKT--QVPVTCGGVTVHPGDILFGDDDGLVI--ATVDELVAALPIAEEIQQKEEIMLGRMASGTS-LLEMLNF-ESH 213
BLAST of mRNA_M-pyrifera_M_contig1184.3811.1 vs. uniprot
Match: A0A6J4NNC3_9ACTN (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax=uncultured Propionibacteriaceae bacterium TaxID=257457 RepID=A0A6J4NNC3_9ACTN) HSP 1 Score: 90.9 bits (224), Expect = 1.960e-20 Identity = 51/109 (46.79%), Postives = 70/109 (64.22%), Query Frame = 1
Query: 13 AVAGELFSAEAKRRSLAGMLIEGSCRDTETIARLRFPVYCRYVNPMAGRCDILDRELMQVPVVIGGVTINPGDVIMGDDDGVVVLGSDLDKIQDTAIKASEILRNERAV 339
AVAGELF+ EA RR +AG++I+G CRD+ T+A L PVY R V P A C ++QVP+ IG V + PGD+++GDDDG+VV + ++Q A I R E A+
Sbjct: 25 AVAGELFATEALRRGVAGIVIDGLCRDSRTLAGLDLPVYARGVAPTA--CPARSLPVVQVPIRIGAVEVQPGDLVLGDDDGLVVATEN--ELQAVLDVAEVIQRREEAL 129 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1184.3811.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig1184.3811.1 >prot_M-pyrifera_M_contig1184.3811.1 ID=prot_M-pyrifera_M_contig1184.3811.1|Name=mRNA_M-pyrifera_M_contig1184.3811.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=140bp GGQIAVAGELFSAEAKRRSLAGMLIEGSCRDTETIARLRFPVYCRYVNPMback to top mRNA from alignment at M-pyrifera_M_contig1184:82..4938+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig1184.3811.1 ID=mRNA_M-pyrifera_M_contig1184.3811.1|Name=mRNA_M-pyrifera_M_contig1184.3811.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4857bp|location=Sequence derived from alignment at M-pyrifera_M_contig1184:82..4938+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig1184:82..4938+ >mRNA_M-pyrifera_M_contig1184.3811.1 ID=mRNA_M-pyrifera_M_contig1184.3811.1|Name=mRNA_M-pyrifera_M_contig1184.3811.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=840bp|location=Sequence derived from alignment at M-pyrifera_M_contig1184:82..4938+ (Macrocystis pyrifera P11B4 male)back to top |