mRNA_M-pyrifera_M_contig11838.3805.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig11838.3805.1
Unique NamemRNA_M-pyrifera_M_contig11838.3805.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig11838.3805.1 vs. uniprot
Match: D7G6U6_ECTSI (Cytosine-C5 specific DNA methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6U6_ECTSI)

HSP 1 Score: 426 bits (1095), Expect = 2.400e-144
Identity = 211/296 (71.28%), Postives = 240/296 (81.08%), Query Frame = 1
Query:    1 VYEHNFPGCTVTRRSIEHLSSQDLDGTADVWLLSPPCQPFCRIGKQMDENDNRSVSFLHLLSILKAAEDPPELFFLENVRGFEGSHAHQRLLEVLILRGFRVEQYLLSPVHLGIPNTRNRYFCLASRCGVEGEEEVGPIQESLPCHNSA--MTPASTERDQSMVGAAAVPLLLSPKAASYANPSLRFDIVTRRSTETTTFTKGYGKHAGRAGPVLLLTDDGERRVSEEDLGRFPSGLDLGPQGRELRWFSDREMLRLHGFPERFEFPAGLSLRQRFGLVGNSVNVELVTLLLRRLL 882
            VYEHNFPGC+VTRRSIEHLS+QD++  AD+WLLSPPCQPFCR+G +MDE DNRSVSFLHLLS+LK    PP   FLENV+GFEGSHAH RLLE LI RGF VEQYLLSP  LGIPN+R RY+CLA R   +G  E   +++S P   +A  + P S   D S+ G AAVPLLLSPKA S+ANPSLRFD+VT +STETTTFTKGY KHAGRAGPV+LLTDDGERRVS E LGRFPSGLDLGP+G+E+RWFSD EMLRLHGFPE F+FP  L+ RQR  LVGNSVNVE+V LLL  +L
Sbjct:   94 VYEHNFPGCSVTRRSIEHLSAQDIEVDADIWLLSPPCQPFCRVGNKMDEQDNRSVSFLHLLSLLKTIRTPPSFLFLENVQGFEGSHAHLRLLETLIARGFDVEQYLLSPNQLGIPNSRLRYYCLARRRNADGMGEATDVKKSFPQDVAAVPLRPLSKYLDPSLYGEAAVPLLLSPKACSHANPSLRFDVVTLQSTETTTFTKGYRKHAGRAGPVVLLTDDGERRVSGEKLGRFPSGLDLGPEGKEVRWFSDGEMLRLHGFPEAFDFPTALTPRQRCALVGNSVNVEVVALLLEFML 389          
BLAST of mRNA_M-pyrifera_M_contig11838.3805.1 vs. uniprot
Match: A0A6H5KAF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAF5_9PHAE)

HSP 1 Score: 238 bits (608), Expect = 2.260e-73
Identity = 124/183 (67.76%), Postives = 144/183 (78.69%), Query Frame = 1
Query:  334 LGIPNTRNRYFCLASRCGVEGEEEVGPIQESLPCHNSAMTPASTERDQSMVGAAAVPLLLSPKAASYANPSLRFDIVTRRSTETTTFTKGYGKHAGRAGPVLLLTDDGERRVSEEDLGRFPSGLDLGPQGRELRWFSDREMLRLHGFPERFEFPAGLSLRQRFGLVGNSVNVELVTLLLRRLL 882
            L I +TR RY+CLA R   +G+ E   ++ESLP  + A  P     D S+ G AAVPLLLSPKA S+ANPSLRFD+VT +ST+TTTFTKGY KHAGRAGPV+LLTDDGERRVS E LGRFPSGLDL  +G+E+RWFSDREMLRLHGFPE F+FP  L+LRQR  LVGNSVNVE+V LLL  +L
Sbjct:   35 LNINDTRLRYYCLARRRNADGKREATDVKESLP-QDMAAVPC----DPSLCGEAAVPLLLSPKACSHANPSLRFDVVTLQSTKTTTFTKGYRKHAGRAGPVVLLTDDGERRVSGEKLGRFPSGLDLKTEGKEVRWFSDREMLRLHGFPEAFDFPTSLTLRQRCALVGNSVNVEVVALLLEFML 212          
BLAST of mRNA_M-pyrifera_M_contig11838.3805.1 vs. uniprot
Match: A0A6H5KE46_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE46_9PHAE)

HSP 1 Score: 221 bits (564), Expect = 1.590e-67
Identity = 100/144 (69.44%), Postives = 117/144 (81.25%), Query Frame = 1
Query:    1 VYEHNFPGCTVTRRSIEHLSSQDLDGTADVWLLSPPCQPFCRIGKQMDENDNRSVSFLHLLSILKAAEDPPELFFLENVRGFEGSHAHQRLLEVLILRGFRVEQYLLSPVHLGIPNTRNRYFCLASRCGVEGEEEVGPIQESLP 432
            VYEHNFPGC++TRRSIEHLS+QD++  AD+WLLSPPCQPFCR+G +MDE DNRSVSFLHLLS+LK    PP   FLENV+GFEGSH H+RLLE L  RGF VEQYLLSP  LGIPN+R RY+CLA R   +G+ E   ++ESLP
Sbjct:    3 VYEHNFPGCSLTRRSIEHLSAQDIEVDADIWLLSPPCQPFCRVGNKMDEQDNRSVSFLHLLSLLKTIRKPPSFLFLENVQGFEGSHTHRRLLETLTARGFDVEQYLLSPSQLGIPNSRLRYYCLARRRNADGKREATDVKESLP 146          
BLAST of mRNA_M-pyrifera_M_contig11838.3805.1 vs. uniprot
Match: A0A0G4H2G5_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4H2G5_VITBC)

HSP 1 Score: 208 bits (530), Expect = 1.470e-59
Identity = 131/344 (38.08%), Postives = 178/344 (51.74%), Query Frame = 1
Query:    1 VYEHNFPGCTVTRRSIEHLSSQDLDGTADVWLLSPPCQPFCRIGKQMDENDNRSVSFLHLLSILKAAEDPPELFFLENVRGFEGSHAHQRLLEVLILRGFRVEQYLLSPVHLGIPNTRNRYFCLASRCGVEGEEEVGPIQESLPCHNSAMTPASTERDQSMVG------AAAVPLLLSPKAASYANPSLRFDIVTRRSTETTTFTKGYGKHAGRAGPVLLLTDDGE-------------------------------------RRVSEE---DLGRFP----SGLDLGPQGRELRWFSDREMLRLHGFPERFEFPAGLSLRQRFGLVGNSVNVELVTLLLRRLL 882
            VY HNF G    +  IE LS+ + DG ADVWL+SPPCQP+ R GKQ+D  D R+   LHL  I+K    PP L FLENVR FE S +H+RL++ L  + + +EQ++++P  LGIPNTR RY+C+A R   +   E  P  ES+     A+       D   VG         +  LL  +     N +  FD+    +  TTTFTKGYG++ GRAGP+LL    G                                      R V +    D  RF     S  D   +    R+FS REMLR+HGFPE+F FPA ++ RQ++GL+GNS+++ +V  LL+  L
Sbjct:   50 VYLHNF-GMQPQQGLIEPLSASEFDGRADVWLMSPPCQPYTRGGKQLDAEDTRAAGLLHLCDIIKELAHPPRLLFLENVRCFEKSQSHKRLMDALHSQHYAIEQFIVTPSQLGIPNTRVRYYCIAIRSR-DLTPEASPGVESMAFEMPAVDGREIPADMGRVGDYVERKGRHLADLLIDRNVFTKNETFLFDVACEDTRATTTFTKGYGRNEGRAGPILLCDRQGRPLPSYPPAQQTIQVNGPSVDSPEDCRIDGTLVSMETYRHVIDTHVLDTRRFRCVCVSCDDEAAECVRYRYFSPREMLRVHGFPEKFAFPACVTTRQQYGLIGNSISIPVVAHLLQYAL 391          
BLAST of mRNA_M-pyrifera_M_contig11838.3805.1 vs. uniprot
Match: A0A2R5L5D2_9ACAR (Putative c-5 cytosine-specific dna methylase (Fragment) n=1 Tax=Ornithodoros turicata TaxID=34597 RepID=A0A2R5L5D2_9ACAR)

HSP 1 Score: 177 bits (448), Expect = 4.450e-48
Identity = 117/307 (38.11%), Postives = 159/307 (51.79%), Query Frame = 1
Query:    1 VYEHNFPGCTVTRRSIEHLSSQDLDGTA-DVWLLSPPCQPFCRIGKQMDENDNRSVSFLHLLSILKAAEDPPELFFLENVRGFEGSHAHQRLLEVLILRGFRVEQYLLSPVHLGIPNTRNRYFCLASRCGVEG-EEEVGPIQESLPCHNSAMTPAST--ERDQSMVGAAAVPLLLSPKAASYANPSLRFDIVTRRSTETTTFTKGYGKHAGRAGPVLLLT-----DDGER----RVSEEDLGRFPSGLDLGPQGRELRWFSDREMLRLHGFPERFEFPAGLSLRQRFGLVGNSVNVELVTLLLRRLL 882
            VY+ NFP   + +R+++    ++LD    DV  +SPPCQPF R G Q D  D RS SFL+L+ +L     PP    LENV+GFE S      L+ L   GF   +YLLSP   G+PN+R R++CLA R            I  +LP   S   P     E +        +P ++  K A         DIV R +T T  FTKGYG +    G VLL +     DD  R    RVS +D+   P+ +        LR+F+ +E+ RL  FPE+F FP  ++ RQR+ L+GNSVNV LV  L++ LL
Sbjct:   46 VYKFNFPETVLLQRNVQSFKQRELDSLRIDVLTMSPPCQPFTRQGLQRDAQDPRSSSFLNLIQVLPTLAHPPRYILLENVKGFETSSTCAAYLDFLTQHGFHFHRYLLSPTQFGVPNSRLRFYCLAKRGRFSDCPSACDSIWHNLPTECSRPAPLYNFLEEESDSTSEYLLPDIVLSKFAFI------LDIVDRNATNTCCFTKGYGHYVEGTGSVLLQSSRDAMDDVYRDVSPRVSSDDV--LPASVVERLCELRLRYFTPQEVSRLMCFPEQFRFPQEVTPRQRYRLLGNSVNVRLVRELMQHLL 344          
BLAST of mRNA_M-pyrifera_M_contig11838.3805.1 vs. uniprot
Match: R7VAP8_CAPTE (Uncharacterized protein n=1 Tax=Capitella teleta TaxID=283909 RepID=R7VAP8_CAPTE)

HSP 1 Score: 175 bits (444), Expect = 1.980e-47
Identity = 110/318 (34.59%), Postives = 172/318 (54.09%), Query Frame = 1
Query:    1 VYEHNFPGCTVTRRSIEHLSSQDLDGTA-DVWLLSPPCQPFCRIGKQMDENDNRSVSFLHLLSILKAAEDPPELFFLENVRGFEGSHAHQRLLEVLILRGFRVEQYLLSPVHLGIPNTRNRYFCLASRCGVEGE-EEVGPIQESLP-CHNSAMTPASTERDQSMVGAAAVPLL-----LSPKAASYANPSL-----------RF---DIVTRRSTETTTFTKGYGKHAGRAGPVLLLTDDGERRVSEEDLGR-FPSGLDLGPQGRELRWFSDREMLRLHGFPERFEFPAGLSLRQRFGLVGNSVNVELVTLLLRRLLL 885
            +Y+HNFP C +  R IE +   +      D+  +SPPCQPF R+GKQ D +D R+ SFLHLL ++   E   +  F+ENV+GF+GS AH+ LLE L    + ++++L+SP+  GIPN+R RY+ +A +  ++ + +    I   LP C  S +    ++ D +   +++VPL      +    +SY    +           RF   DIV   ST +  FTK YG H   AG VL    D E  ++E    + + +  +   +   LR+FS RE+  L  FP  F FPA  S  Q + ++GNS+NV +V +L++ +L+
Sbjct:   43 IYKHNFPDCLLMNRCIESIQLSEFSRLRPDLITMSPPCQPFTRVGKQRDIDDPRTKSFLHLLKVISTLERSVKYIFVENVKGFDGSEAHRMLLETLQAADYVMQEFLISPLQCGIPNSRLRYYLMAKKKPLKFQFDTTSQIMTELPACAASYLNHCQSKPDST--ASSSVPLYDRCAAMCRPLSSYLQEDMSHDLLPEKFVHRFWVMDIVKPSSTNSCCFTKRYGHHIEGAGSVLQTNTDCEIDLTEYKKTKVYTAETEAAVKQLGLRFFSPREIANLMHFPAHFSFPANFSTVQTYRVLGNSLNVHVVAVLMKLMLI 358          
BLAST of mRNA_M-pyrifera_M_contig11838.3805.1 vs. uniprot
Match: A0A7S4DQV2_9EUKA (Hypothetical protein n=4 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DQV2_9EUKA)

HSP 1 Score: 176 bits (446), Expect = 2.180e-47
Identity = 118/312 (37.82%), Postives = 158/312 (50.64%), Query Frame = 1
Query:    4 YEHNF---PGCTVTRRSIEHLSSQDLDGTADVWLLSPPCQPFCRIGKQMDENDNRSVSFLHLLSILKAAEDPPELFFLENVRGFEGSHAHQRLLEVLILRGFRVEQYLLSPVHLGIPNTRNRYFCLASRCGVEGEEEVGPIQESLPCHNSAMTPASTERDQSMV----------------GAAAVPLLLSPKAASYANPSLRFDIVTRRSTETTTFTKGYGK-HAGRAGPVLLLTDDGERRVSEEDLGRFPSGLDLGPQGRELRWFSDREMLRLHGFPERFEFPAGLSLRQRFGLVGNSVNVELVTLLLRRL 879
            YE NF   P C+    SIE+L  + LD  A  WLLSPPCQP+ R GKQ D ND RS SFL+LL +L   + PP+ F +ENV+GF+ S   + +L  L    F + ++LL P   GIPNTR RY+C+A R      E    I  S+P   S+      +   ++                 G   +   L P+         RFDI    S ++  FTKGYG  H    G VLLL  D  R     +  R P    L  + R  R+F+ +E L+L GFPE + FP  L+ RQ + L+GNS+NV +V  L+R L
Sbjct:   84 YELNFHIRPSCS----SIENLKKRQLDKKARFWLLSPPCQPYTRAGKQEDINDPRSRSFLNLLEVLVTLDTPPDYFLMENVKGFDTSKMREFMLTKLRSLSFHIAEFLLQPKQFGIPNTRLRYYCIARRTKPFPGEVTSQINLSIPSMGSSTGQGMADSKATVQPPTLGEFLGKVLLKDDGKTDIESFLVPQRVLKRCGGYRFDIAAPWSRDSACFTKGYGTTHVKGTGSVLLL--DEWRTNDRREEPRPPQCRILSGEER-ARFFTPQEALKLSGFPESYRFPPKLTHRQAWALIGNSLNVCVVANLIRFL 388          
BLAST of mRNA_M-pyrifera_M_contig11838.3805.1 vs. uniprot
Match: A0A1Y1WKJ2_9FUNG (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1WKJ2_9FUNG)

HSP 1 Score: 174 bits (441), Expect = 5.320e-47
Identity = 121/328 (36.89%), Postives = 167/328 (50.91%), Query Frame = 1
Query:    1 VYEHNFPGCTVTRRSIEHLSSQDLDG-TADVWLLSPPCQPFCRIGKQMDENDNRSVSFLHLLSILKAAEDPPELFFLENVRGFEGSHAHQRLLEVLILRGFRVEQYLLSPVHLGIPNTRNRYFCLASRCGVEGEEE---------------------VGPIQESLPCHNSAMTPASTERDQSMVGAAAVPLLLSPKAASYANPSLRFDIVTRRSTETTTFTKGYGKHAGRAGPVLLLTDDGERRVSEEDLGRFPSGLDLGPQGRELRWFSDREMLRLHGFPER------------FEFPAGLSLRQRFGLVGNSVNVELVTLLLRRLL 882
            VYEHNF G     R+I++L + D+D  +A+ WLLSPPCQP+ R GK +D+ D+R+   +HL+ +L    + P   FLENV  FE S +  RL+E L   GF V + L+SPV +G+PN R RYF +A R     + E                      GP  +S+        P S+  D S+    AV  L  P++A      L FDIV   S +T+TFTK YG         LL T + +  V E   G     LDLG     +R+FS +E+  LH FP R              FPA L+ RQ+  L+GNS+NV++V  L+R +L
Sbjct:   43 VYEHNF-GLRPNNRAIDYLETADIDKYSANCWLLSPPCQPYTRGGKYLDDEDDRARGLIHLIEMLPKLRNVPRYVFLENVMNFENSQSRTRLVETLGTLGFEVNECLVSPVQMGVPNNRLRYFLIAQRRWAADDVENAARTTKYLARGADAVHKDWPFGPAVKSIDA--VCAIPLSSYIDASLD---AVESLRVPQSAILKRQRLEFDIVRASSAQTSTFTKSYGSRNLIGSGSLLQTRNLD--VVENGFGAPERLLDLG-----IRFFSPKEVALLHHFPYRAADSPVADGRHYLGFPASLTQRQQLQLLGNSLNVKVVAELIRHIL 357          
BLAST of mRNA_M-pyrifera_M_contig11838.3805.1 vs. uniprot
Match: A0A4P9XME6_9FUNG (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XME6_9FUNG)

HSP 1 Score: 171 bits (433), Expect = 1.170e-45
Identity = 111/331 (33.53%), Postives = 170/331 (51.36%), Query Frame = 1
Query:    1 VYEHNFPGCTVTRRSIEHLSSQDLDG-TADVWLLSPPCQPFCRIGKQMDENDNRSVSFLHLLSILKAAEDPPELFFLENVRGFEGSHAHQRLLEVLILRGFRVEQYLLSPVHLGIPNTRNRYFCLASR------------CGVEGEEEVGPIQESLP-----CHNSAMTPASTERDQSMVGAAAVPLLLS---PKA-ASYA-------NPSLRFDIVTRRSTETTTFTKGYGKHAGRAGPVLLLTDDGERRVSEEDL-GRFPSGLDLGPQGRE-------LRWFSDREMLRLHGFPERFEFPAGLSLRQRFGLVGNSVNVELVTLLLRRLL 882
            VY HNFPG  +    +E +S Q+ +   AD++L+SPPCQP+ R G+Q+   D+R+ SFL ++ +L + + PP+   +ENV+GFE S     L+E L   G+   ++LL+P+  G+PN R RY+ +A R            C         P+Q +LP       +  ++   T+  +++     +   L    P+  +SYA            FDIV   S  +  FTKGYG H    G ++ L  D +   + E   G  P   D   Q  E       LR+F++RE+ RL GFPE F FP  ++ RQR+  +GNS++V +V+ LLR LL
Sbjct:   43 VYAHNFPGVRMCASLVESVSMQEYEALAADIYLMSPPCQPYTRTGRQLGSEDSRAKSFLRIIDMLGSMQHPPKYLLVENVKGFEVSETRSALVEQLERMGYAFREFLLTPLQFGVPNARLRYYLVAKRKPLKFLDDEQEACADAATSGCPPVQHTLPGTRAQTDSLLLSNLETQEARTLTDVREISEYLQLDDPQVESSYAIEQKTLDKHGWLFDIVKPTSRRSCCFTKGYGHHVRGTGSIVQLNADVDTAAAFEHFQGIEPR--DASSQESEHPLAHLRLRYFTEREIARLMGFPETFGFPDTVTRRQRYRALGNSLSVTVVSALLRYLL 371          
BLAST of mRNA_M-pyrifera_M_contig11838.3805.1 vs. uniprot
Match: A9SWH2_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9SWH2_PHYPA)

HSP 1 Score: 170 bits (430), Expect = 2.420e-45
Identity = 115/320 (35.94%), Postives = 168/320 (52.50%), Query Frame = 1
Query:    1 VYEHNFPGCTVTRRSIEHLSSQDLDG-TADVWLLSPPCQPFCRIGKQMDENDNRSVSFLHLLSILKAAEDPPELFFLENVRGFEGSHAHQRLLEVLILRGFRVEQYLLSPVHLGIPNTRNRYFCLASRCGVEGEE---------EVGPI-----QESLPCHNSAMTPASTERDQSM-----VGAAAVPLLLSPKAASYANPSLR-------FDIVTRRSTETTTFTKGYGKHAGRAGPVLLLTDDGERRVSEEDLGRFPSGLDLGPQGRELRWFSDREMLRLHGFPERFEFPAGLSLRQRFGLVGNSVNVELVTLLLRRL 879
            VYEHNF G   ++R+I+ L+   LD   AD W++SPPCQP+ R G + D  D R+ SFL +L +L   + PP    +ENV GFE S  H  L+++    GF  ++++LSP+ LGIP +R RYFCLA +      +         E+GP+      E +        P S   ++       +G      + + K   Y  PS         FD+VT+ S     FTK YG +A   G VL      ++ +  +DL   P G+ L   G  LR+F+ RE+  LH FP  F FP+ +SL+QR+ L+GNS++V +V +LLR L
Sbjct:   46 VYEHNF-GHRPSQRNIQRLTVSQLDAYKADTWIMSPPCQPYTRQGLRKDAGDARAFSFLQMLEMLPQMKFPPNYILVENVVGFEDSITHGHLIDMFEDLGFMTQEFILSPLQLGIPYSRPRYFCLAKKKPKSFVQPAYNNSLLCELGPLPLLKMNEPIIDPGVYCRPVSDFMEEEPCTSDNLGKCFDMNMCADKWELYKLPSSVLERWGDCFDMVTKDSKRCCCFTKSYGSYAKGTGSVLST----KKALMTQDL---PEGVSLNSLG--LRYFTPREVANLHSFPPEFSFPSQVSLKQRYALLGNSLSVAVVGVLLRYL 355          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11838.3805.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6U6_ECTSI2.400e-14471.28Cytosine-C5 specific DNA methyltransferase n=1 Tax... [more]
A0A6H5KAF5_9PHAE2.260e-7367.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KE46_9PHAE1.590e-6769.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0G4H2G5_VITBC1.470e-5938.08Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A2R5L5D2_9ACAR4.450e-4838.11Putative c-5 cytosine-specific dna methylase (Frag... [more]
R7VAP8_CAPTE1.980e-4734.59Uncharacterized protein n=1 Tax=Capitella teleta T... [more]
A0A7S4DQV2_9EUKA2.180e-4737.82Hypothetical protein n=4 Tax=Lotharella globosa Ta... [more]
A0A1Y1WKJ2_9FUNG5.320e-4736.89S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A4P9XME6_9FUNG1.170e-4533.53S-adenosyl-L-methionine-dependent methyltransferas... [more]
A9SWH2_PHYPA2.420e-4535.94Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11838contigM-pyrifera_M_contig11838:126..5161 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score343.2
Seed ortholog evalue1.1e-91
Seed eggNOG ortholog2880.D7G6U6
KEGG rclassRC00003,RC00332
KEGG koko:K00558,ko:K15336
KEGG ReactionR04858
KEGG Pathwayko00270,ko01100,ko05206,map00270,map01100,map05206
KEGG ModuleM00035
Hectar predicted targeting categoryother localisation
EggNOG free text desc.tRNA methyltransferase activity
EggNOG OGsCOG0270@1,KOG0919@2759
Ec32 ortholog descriptiontRNA (cytosine-5-)-methyltransferase
Ec32 orthologEc-01_012190.1
EC2.1.1.204,2.1.1.37
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko02048,ko03016,ko03032,ko03036
Exons4
Model size1263
Cds size780
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11838.3805.1prot_M-pyrifera_M_contig11838.3805.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig11838 900..4816 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815703.3848152-UTR-M-pyrifera_M_contig11838:125..2261622815703.3848152-UTR-M-pyrifera_M_contig11838:125..226Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11838 126..226 +
1692277529.748663-UTR-M-pyrifera_M_contig11838:125..2261692277529.748663-UTR-M-pyrifera_M_contig11838:125..226Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11838 126..226 +
1622815703.3959754-UTR-M-pyrifera_M_contig11838:862..8991622815703.3959754-UTR-M-pyrifera_M_contig11838:862..899Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11838 863..899 +
1692277529.7602162-UTR-M-pyrifera_M_contig11838:862..8991692277529.7602162-UTR-M-pyrifera_M_contig11838:862..899Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11838 863..899 +
1622815703.4451735-UTR-M-pyrifera_M_contig11838:4816..51611622815703.4451735-UTR-M-pyrifera_M_contig11838:4816..5161Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11838 4817..5161 +
1692277529.8143227-UTR-M-pyrifera_M_contig11838:4816..51611692277529.8143227-UTR-M-pyrifera_M_contig11838:4816..5161Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11838 4817..5161 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815703.4116068-CDS-M-pyrifera_M_contig11838:899..10401622815703.4116068-CDS-M-pyrifera_M_contig11838:899..1040Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11838 900..1040 +
1692277529.7700639-CDS-M-pyrifera_M_contig11838:899..10401692277529.7700639-CDS-M-pyrifera_M_contig11838:899..1040Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11838 900..1040 +
1622815703.4224858-CDS-M-pyrifera_M_contig11838:3242..34341622815703.4224858-CDS-M-pyrifera_M_contig11838:3242..3434Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11838 3243..3434 +
1692277529.7810738-CDS-M-pyrifera_M_contig11838:3242..34341692277529.7810738-CDS-M-pyrifera_M_contig11838:3242..3434Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11838 3243..3434 +
1622815703.4347844-CDS-M-pyrifera_M_contig11838:4369..48161622815703.4347844-CDS-M-pyrifera_M_contig11838:4369..4816Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11838 4370..4816 +
1692277529.793795-CDS-M-pyrifera_M_contig11838:4369..48161692277529.793795-CDS-M-pyrifera_M_contig11838:4369..4816Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11838 4370..4816 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig11838.3805.1

>prot_M-pyrifera_M_contig11838.3805.1 ID=prot_M-pyrifera_M_contig11838.3805.1|Name=mRNA_M-pyrifera_M_contig11838.3805.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=260bp
MDENDNRSVSFLHLLSILKAAEDPPELFFLENVRGFEGSHAHQRLLEVLI
LRGFRVEQYLLSPVHLGIPNTRNRYFCLASRCGVEGEEEVGPIQESLPCH
NSAMTPASTERDQSMVGAAAVPLLLSPKAASYANPSLRFDIVTRRSTETT
TFTKGYGKHAGRAGPVLLLTDDGERRVSEEDLGRFPSGLDLGPQGRELRW
FSDREMLRLHGFPERFEFPAGLSLRQRFGLVGNSVNVELVTLLLRRLLLL
QAGLEGGVS*
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mRNA from alignment at M-pyrifera_M_contig11838:126..5161+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig11838.3805.1 ID=mRNA_M-pyrifera_M_contig11838.3805.1|Name=mRNA_M-pyrifera_M_contig11838.3805.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=5036bp|location=Sequence derived from alignment at M-pyrifera_M_contig11838:126..5161+ (Macrocystis pyrifera P11B4 male)
GTATACGAGCACAACTTTCCTGGCTGTACCGTGACGAGGCGATCTATCGA GCACCTTTCCTCTCAAGACCTTGACGGTACCGCGGACGTCTGGCTTCTAA GGTTCGACATTGTACCGTGCCAGAAACAACTGGCTCCCTCGGTGTTCCGC CATTCGTTCTGCCGAAAATATCCTACTTAGGGTATTTTAGTACGCGTATT ATACGATTAGGCCTTGCTGGTTAGAGCAAAGCTTCAGCAAACCAGAACCC AAGCAGCACATTGTGTGCTTTAATACTTGTACGGTAATACATGGTGGGCA CCCCACCCCCCCGGCCTACGGGCGTTGTTTGGCGATAGAGTATTCTAGAG GGGCAGTACTTGTTGTGATCAACCCTAAAATCGTCACATATTTTCCAATA GCCATGAACTTTTTGTGAATCCCCAATGTTACCTATGTTGTCCGCACCAG GTGCTCTAACGTGCATTGTTAATGACGCCGCGACCTTTGGAGCTCCACCA CTCGTTACGCATGCCGACATACAAACGTGTTCACCAGCTAGTAACAGTAG ATCAACGCGTTGACGTATCATGCTAAAATACCGGTATGTTGGAAAGCCTT TTGCGTTTTTTTACGTTCTGTTGCAGCATTCTCGCCAAGGCAAAGAAACC GCGTTTAAGCTGCTGAGTTGAAATGCGAAGATGCCGACATGTTGTGCGGT CGCTGCCCGTGTTGCCCTTGCCCTACGCCGCCGTTAGTCCGCCTTGCCAG CCCTTCTGCCGGATTGGCAAGCAGATGGACGAAAACGACAACCGGTCGGT GAGCTTTCTGCACCTTCTGTCCATCCTCAAAGCCGCTGAGGATCCGCCGG AACTTTTCTTCCTGGAGAACGTGAGGGGCTTCGAGGGTTCGCATGCTCAC CAACGGTTACTGGAAGTGAGTGACCACAGCAAAATATCATGACATGCTAC GTTCAATCTAGCCACGATGAATTGCGCACCTGGTGACGTCTTGAAAAACA ATACTTGGTGATAAAACCTTCGCCTTCCCGTACCAATAGCACCGGTTTCA ACTTTCTCATTTTATCCCACGCAATATCATTGCACAAGACGCCTGAAAGG ACAACAAATAAACGGGCCGTTGATTGGTATAAAGCTATACATATACCTAT GATGATCCTCAGCCTTATCGGATCCGTTTATTAGTCGGCAAATCTCTCCC GCCTCTGGCCGTCTTTCCGCACGGTTTCTTCGCCGGGGCGTTCCCCCCCC ACGCCTCAACCGTCCGGCGTCGGAGGATCCGCCCGCTCAGCGCCGTGGCG CCCGCGCAAAGCCTTGACGTTGAGATCTACGAAGGAAGCTCCGAAATTCC CTGCCCTATCAGTGTTTTGGCCCATGGTCTCTCGACAGAGTCTATGCATT CGCGTGATTCTTTCCGCCGCGTCCTCTCCGACCTCCAACCCATGGGGTGG TAAACTACGCGGCCGGCGTTGGCATTGTGGGGGCCTGCGTGGGTGGCTGT ATCTGGGACATCGAAGGAACGCCCCGATAGCACATGCCACCCAGGCTCAG TTGAGAACTGCCATCCATAAAAAATTATGCCCTCCGGGGATATATGAAAG AGATAACGCATATCACCTACAGCCGGCACCACTTATGACGGCCAGCAGCA CTTATGGTGTGTACGCTATCGTACGGCGGCAGCTGCAGTGCAGCCATACT ACGTAGCTGCGGAGATGTACAGTTACAGCAGTACTGCTACAACAGCTGCT GTGACAGCACCTTTCCACGGAGCTGCGCTGTTGGTCATTGCGTACTCCCT GAGTTAGGAGTTAGTTGTACCGCCGCCTTCTAGCATTCCGCCGCTTTTTG GTTAATCGGCAAGAAAAAGTCAGCATTCTGCCGCCTTTTCCAACGTTCAT GAAGTGTGGAACGCACGCTCTCAATCTCCTGGCATCGAGTCTCGGCCTCC TCCTCCTCTACATTACCCTCATCACGCAAGTCTGCAACCGGCGGCCGTTC AGGCCGCCGGCGCGACCCCTTGGAATAGTCGCTCTTATTAATAGTATGGC ACACGACCGACACCGTCGGACAACCTGGTTTTCATTTTCAGAATAAAAAC CTTGGGTGGTGCGTTTCGTCTCATTATGGTGTCTGCGCTAAATGAAATAT AGTACGAAATTTGCTGCTCTAGTATCCCGTTACCGACGACTATTAACAAC AAAAAAAACATAGTCAAATTTGCCCAGATATGACGAACTTGCTTTTTTTA TAGCATACCAGGTATTTTAATAGAGCCATATTTGTGTGATGTGAGATTCG ACCGCTGCATTCCGTTCGCCGAAAAATCCCCGGACGCTTTGGATTGGCCA AGCTCGCCCCGAGAGTGGCCTCGGGCCGTGTCTGCTACCGGCGAGGTTTT GCGAGAAGAATTGCTGCTGCTGCATGCCTCTGCTGTCTGCTGCTGTAGGA GATAGGTGCTGCTGCAGGTGCTGTTGGACTTCACGGACTACTGTTATTAA TACTGCATGTAGTGTGCTGCTGCAAGTGAGAGTGATGCTTTTGCTGCAAG CGCTACGACAAGCAAGCACTGCGGTAAGCAAGCGCTGCTGCACACGCAAG CTCTGCTTCAAGCAAGAGAGCCGCTTCAAGAAATCGCTGCTGCAAGCGCT TTTGCAAGCGCGTGCACCCTTGCCGCCACGATCCTGATCTTCGCCGCCAC GACCCCTTCTCGGGCAGAGAGGACAATGAAGAAGAAGGAGGGCGATCTCC TCGTCGTGATGGCGTTGCTTGCACAACGAGTGTCGAGGAGCGCAGGATAG ACCGCACTTCTGTCTGTTGGTGCTTGCTGCTGCTTCCTGCTTCTGCAGCT TGCTGCTGCCGCTGCTGCTGCTGACCGCTGCTGGTAGGTACTGCTGCTTT CACGACTTCTGCTCGTTCGTCCAGCAAGTGCTGCCGTTGCTGCAAGTGTT TTTTTTCCAACATAAAAACCCAATATTTTGCGCTTGTTCGTCTCCGATTA TGCGCATGCCGGAAGGTTTTCAATTATGATTATCTTTCCGACGGAACTCC TCGACGAACAAAAAAATATTGCGCAGATACTGTATTGACCCTTGGCTGAT CGCCCTTCTACCTGCAGGTTTTGATCTTGCGGGGCTTCCGCGTCGAGCAG TACTTGCTCTCGCCGGTTCACTTGGGGATACCCAACACCCGAAATCGGTA TTTCTGTCTCGCTTCGAGGTGTGGCGTGGAAGGCGAGGAGGAGGTCGGTC CTATTCAAGAGTCACTGCCGTGCCACAACTCGGCGATGACCCCTGCCTCG ACGGAACGCGTACCAGAGCAGGAGAAGGTCCACGTGCGTCGGCTCTCGGA GTACCTGGTGAGACGCACTGCCCGGTGAAAGGGACTATCTGCCACCGTTT GTAATGTGTAGTGCTGTGTAGAAGGTGTCGAGGATGCAGCTGCGAGTGTG CTCTTCACATGAGGTAGCGCTGACCACTTTCCGCCAGAGAGCCAAGTGGA CGCGAGCGGTATCGTGTAGAAATACCTCCTGTTGCTTGTGCCGAAACTGG TGGCGTCCCGTTAGAGTCCCATATCATGATATAGCGCGAAGAAAGAGCGG CAGCAGCAGATGGCAGTACCTTGAAACCCCGAACAAAAATTCTTCAGTAC GAGGTAACATGCGCAGGTCTGCAATATCAGTGTCCCCCGCACCCCATGTC CTGAAAACGCCTTCGTGAAATCACGACAACACTTCGCTGTCGGTTGTGTG GCCAACTTGTTTGACCACGCGCGTGCTGTAGAAGTATTTAGCTACCACCC ACCCGATGAGACGACACGCCTCCTCGGGAGACCTAACGCCCCTCCCCCCC CGTGTGGCAAAGCAAAATAGAGTTAAACTCACAAAAGTAGAAAATGAAAT GCACAAGGAGGAACGAGACGTGTTAGAAGAGATGAGGGCAATAGACGAAT GTGACATGGAGGAGTTTGACACACTGGATAGCAGCGAGAAAACGATCGCT ATCCTAGGAGACAGATGGCGGCCACAGGCGGCGAAACAGGAAGGGGATAA GATCAGCAAAAAGTTTCTATGTAATAACTACGTAATGAGAGCCCAAACGT TGGAGGTGCCTCTTTTAGAAACAGGAACCGTGCCCCGTCTCGACAGGGAT GAGTGGTCAATGGTCAAATGACTAAGGCAAGTAACAAAATGAGTACGCCC CCCCCTCCTACCACGCCGCCGCCAACTCCCGGTCTTGACTACAGGACCAG TCTATGGTGGGGGCAGCAGCGGTGCCGCTTCTTCTGTCCCCGAAGGCAGC TTCGTACGCGAACCCTTCCCTCCGTTTCGACATCGTCACCCGGAGGTCGA CCGAAACCACAACTTTCACCAAAGGCTATGGAAAACACGCGGGAAGGGCA GGCCCCGTCCTCCTGCTGACGGACGACGGCGAACGCCGGGTGAGCGAGGA GGACCTGGGGCGCTTCCCATCCGGATTGGACCTGGGGCCTCAAGGACGGG AGCTAAGATGGTTCTCGGATAGGGAGATGCTCCGGTTACATGGATTCCCG GAGAGGTTTGAGTTTCCGGCGGGCCTCTCGCTGCGTCAGCGGTTTGGATT GGTGGGAAACAGTGTCAACGTAGAACTTGTTACCCTGCTGTTGAGACGGT TGTTGCTGCTTCAGGCGGGGTTAGAAGGAGGTGTTTCTTGAGGAAGACTA CGTGGCGACAGCAGTAGCTGTCGAGGGAGTAGCAAGCAGTACCGTATACG TGGGCATGGCAATGGGCTATATTTCGGACCATTTGCCCCCAAAAACTTAA GACCTGTTTGGCACAAAAGTGAAGGTATGCCGCGGACGTACTAAGGATAG CGCGCAGCAAGCACAATTCTGGCGGTTGCGATCAACGATAGTGTTGCATG GCCCTAGAGATCTACCGATGCGGCTCAAAGAACAAGACCGAACCTACGGA TTGCGCACAATGAGAAACACTGCTCCACCTTTCTTGGCACGGGCATAAAA ATGAAATTAAGTTGACTGCACGTCGACGGCTGACTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig11838:126..5161+

>mRNA_M-pyrifera_M_contig11838.3805.1 ID=mRNA_M-pyrifera_M_contig11838.3805.1|Name=mRNA_M-pyrifera_M_contig11838.3805.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1560bp|location=Sequence derived from alignment at M-pyrifera_M_contig11838:126..5161+ (Macrocystis pyrifera P11B4 male)
ATGGACGAAAACGACAACCGGTCGGTGAGCTTTCTGCACCTTCTGTCCAT
CCTCAAAGCCGCTGAGGATCCGCCGGAACTTTTCTTCCTGGAGAACGTGA
GGGGCTTCGAGGGTTCGCATGCTCACCAACGGTTACTGGAAATGGACGAA
AACGACAACCGGTCGGTGAGCTTTCTGCACCTTCTGTCCATCCTCAAAGC
CGCTGAGGATCCGCCGGAACTTTTCTTCCTGGAGAACGTGAGGGGCTTCG
AGGGTTCGCATGCTCACCAACGGTTACTGGAAGTTTTGATCTTGCGGGGC
TTCCGCGTCGAGCAGTACTTGCTCTCGCCGGTTCACTTGGGGATACCCAA
CACCCGAAATCGGTATTTCTGTCTCGCTTCGAGGTGTGGCGTGGAAGGCG
AGGAGGAGGTCGGTCCTATTCAAGAGTCACTGCCGTGCCACAACTCGGCG
ATGACCCCTGCCTCGACGGAACGCGTTTTGATCTTGCGGGGCTTCCGCGT
CGAGCAGTACTTGCTCTCGCCGGTTCACTTGGGGATACCCAACACCCGAA
ATCGGTATTTCTGTCTCGCTTCGAGGTGTGGCGTGGAAGGCGAGGAGGAG
GTCGGTCCTATTCAAGAGTCACTGCCGTGCCACAACTCGGCGATGACCCC
TGCCTCGACGGAACGCGACCAGTCTATGGTGGGGGCAGCAGCGGTGCCGC
TTCTTCTGTCCCCGAAGGCAGCTTCGTACGCGAACCCTTCCCTCCGTTTC
GACATCGTCACCCGGAGGTCGACCGAAACCACAACTTTCACCAAAGGCTA
TGGAAAACACGCGGGAAGGGCAGGCCCCGTCCTCCTGCTGACGGACGACG
GCGAACGCCGGGTGAGCGAGGAGGACCTGGGGCGCTTCCCATCCGGATTG
GACCTGGGGCCTCAAGGACGGGAGCTAAGATGGTTCTCGGATAGGGAGAT
GCTCCGGTTACATGGATTCCCGGAGAGGTTTGAGTTTCCGGCGGGCCTCT
CGCTGCGTCAGCGGTTTGGATTGGTGGGAAACAGTGTCAACGTAGAACTT
GTTACCCTGCTGTTGAGACGGTTGTTGCTGCTTCAGGCGGGGTTAGAAGG
AGGTGTTTCTTGAGACCAGTCTATGGTGGGGGCAGCAGCGGTGCCGCTTC
TTCTGTCCCCGAAGGCAGCTTCGTACGCGAACCCTTCCCTCCGTTTCGAC
ATCGTCACCCGGAGGTCGACCGAAACCACAACTTTCACCAAAGGCTATGG
AAAACACGCGGGAAGGGCAGGCCCCGTCCTCCTGCTGACGGACGACGGCG
AACGCCGGGTGAGCGAGGAGGACCTGGGGCGCTTCCCATCCGGATTGGAC
CTGGGGCCTCAAGGACGGGAGCTAAGATGGTTCTCGGATAGGGAGATGCT
CCGGTTACATGGATTCCCGGAGAGGTTTGAGTTTCCGGCGGGCCTCTCGC
TGCGTCAGCGGTTTGGATTGGTGGGAAACAGTGTCAACGTAGAACTTGTT
ACCCTGCTGTTGAGACGGTTGTTGCTGCTTCAGGCGGGGTTAGAAGGAGG
TGTTTCTTGA
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