mRNA_M-pyrifera_M_contig118374.3804.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig118374.3804.1
Unique NamemRNA_M-pyrifera_M_contig118374.3804.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig118374.3804.1 vs. uniprot
Match: A0A455UVB0_9GAMM (Uncharacterized protein n=1 Tax=Halomonas axialensis TaxID=115555 RepID=A0A455UVB0_9GAMM)

HSP 1 Score: 385 bits (989), Expect = 3.460e-134
Identity = 180/183 (98.36%), Postives = 182/183 (99.45%), Query Frame = 1 
Query:    1 FIYPDDMAAEGPFGDHTGYYNEVDHFPVFTITRMTMRRDAIYHSTYTGRPPDEPAILGVALNEVFVPILCKQFPEIVDFYLPPEGCSYRMAVVTMKKQYPGHAKRVMMGVWSFLRQFMYTKFVIVLDDDVDARNWEDVIWAITTRMDPARDTVMVENTPIDYLDFASPVSGLGSKMGLDATNK 549
            FIYPDDMA EGPFGDHTGYYNEVDHFPVFT+TRMTMRRDAIYHSTYTGRPPDEPAILGVALNEVFVPILCKQFPEIVDFYLPPEGCSYRMAVVTMKKQYPGHAKRVMMGVWSFLRQFMYTKFVIVLDDDVDARNWEDV+WAITTRMDPARDTVMVENTPIDYLDFASPVSGLGSKMGLDATNK
Sbjct:   58 FIYPDDMAPEGPFGDHTGYYNEVDHFPVFTVTRMTMRRDAIYHSTYTGRPPDEPAILGVALNEVFVPILCKQFPEIVDFYLPPEGCSYRMAVVTMKKQYPGHAKRVMMGVWSFLRQFMYTKFVIVLDDDVDARNWEDVMWAITTRMDPARDTVMVENTPIDYLDFASPVSGLGSKMGLDATNK 240
[Close]
BLAST of mRNA_M-pyrifera_M_contig118374.3804.1 vs. uniprot
Match: G4FC69_9GAMM (3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=38 Tax=root TaxID=1 RepID=G4FC69_9GAMM)

HSP 1 Score: 387 bits (994), Expect = 7.900e-132
Identity = 181/183 (98.91%), Postives = 183/183 (100.00%), Query Frame = 1 
Query:    1 FIYPDDMAAEGPFGDHTGYYNEVDHFPVFTITRMTMRRDAIYHSTYTGRPPDEPAILGVALNEVFVPILCKQFPEIVDFYLPPEGCSYRMAVVTMKKQYPGHAKRVMMGVWSFLRQFMYTKFVIVLDDDVDARNWEDVIWAITTRMDPARDTVMVENTPIDYLDFASPVSGLGSKMGLDATNK 549
            FIYPDDMAAEGPFGDHTGYYNEVDHFPVFT+TRMTMRRDAIYHSTYTGRPPDEPAILG+ALNEVFVPILCKQFPEIVDFYLPPEGCSYRMAVVTMKKQYPGHAKRVMMGVWSFLRQFMYTKFVIVLDDDVDARNWEDVIWAITTRMDPARDTVMVENTPIDYLDFASPVSGLGSKMGLDATNK
Sbjct:  273 FIYPDDMAAEGPFGDHTGYYNEVDHFPVFTVTRMTMRRDAIYHSTYTGRPPDEPAILGLALNEVFVPILCKQFPEIVDFYLPPEGCSYRMAVVTMKKQYPGHAKRVMMGVWSFLRQFMYTKFVIVLDDDVDARNWEDVIWAITTRMDPARDTVMVENTPIDYLDFASPVSGLGSKMGLDATNK 455
[Close]
BLAST of mRNA_M-pyrifera_M_contig118374.3804.1 vs. uniprot
Match: H0J696_9GAMM (3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=60 Tax=Halomonadaceae TaxID=28256 RepID=H0J696_9GAMM)

HSP 1 Score: 382 bits (980), Expect = 1.080e-129
Identity = 179/183 (97.81%), Postives = 181/183 (98.91%), Query Frame = 1 
Query:    1 FIYPDDMAAEGPFGDHTGYYNEVDHFPVFTITRMTMRRDAIYHSTYTGRPPDEPAILGVALNEVFVPILCKQFPEIVDFYLPPEGCSYRMAVVTMKKQYPGHAKRVMMGVWSFLRQFMYTKFVIVLDDDVDARNWEDVIWAITTRMDPARDTVMVENTPIDYLDFASPVSGLGSKMGLDATNK 549
            FIYPDDMA EGPFGDHTGYYNEVDHFPVFT+TRMTMRRDAIYHSTYTGRPPDEPAILGVALNEVFVPIL KQFPEIVDFYLPPEGCSYRMAVVTMKKQYPGHAKRVMMGVWSFLRQFMYTKFVIVLDDDVDARNWEDV+WAITTRMDPARDTVMVENTPIDYLDFASPVSGLGSKMGLDATNK
Sbjct:  273 FIYPDDMAPEGPFGDHTGYYNEVDHFPVFTVTRMTMRRDAIYHSTYTGRPPDEPAILGVALNEVFVPILAKQFPEIVDFYLPPEGCSYRMAVVTMKKQYPGHAKRVMMGVWSFLRQFMYTKFVIVLDDDVDARNWEDVMWAITTRMDPARDTVMVENTPIDYLDFASPVSGLGSKMGLDATNK 455
[Close]
BLAST of mRNA_M-pyrifera_M_contig118374.3804.1 vs. uniprot
Match: A0A7M1Q708_9GAMM (3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=2 Tax=unclassified Halomonas TaxID=2609666 RepID=A0A7M1Q708_9GAMM)

HSP 1 Score: 367 bits (942), Expect = 6.530e-124
Identity = 170/183 (92.90%), Postives = 180/183 (98.36%), Query Frame = 1 
Query:    1 FIYPDDMAAEGPFGDHTGYYNEVDHFPVFTITRMTMRRDAIYHSTYTGRPPDEPAILGVALNEVFVPILCKQFPEIVDFYLPPEGCSYRMAVVTMKKQYPGHAKRVMMGVWSFLRQFMYTKFVIVLDDDVDARNWEDVIWAITTRMDPARDTVMVENTPIDYLDFASPVSGLGSKMGLDATNK 549
            FIYPDDMA EGP+GDHTGYYNEVD FPVFT+TRMTMRRDAIYHSTYTGRPPDEPAILG+ALNEVFVPIL KQFPEIVDFYLPPEGCSYRMAVVTM+KQYPGHAKRVMMGVWSFLRQFMYTKFV+VLDDDVDAR+W+DVIWAITTRMDPARDTV+VENTPIDYLDFASPV+GLGSKMGLDAT+K
Sbjct:  273 FIYPDDMAPEGPYGDHTGYYNEVDEFPVFTVTRMTMRRDAIYHSTYTGRPPDEPAILGLALNEVFVPILRKQFPEIVDFYLPPEGCSYRMAVVTMRKQYPGHAKRVMMGVWSFLRQFMYTKFVVVLDDDVDARDWKDVIWAITTRMDPARDTVLVENTPIDYLDFASPVAGLGSKMGLDATSK 455
[Close]
BLAST of mRNA_M-pyrifera_M_contig118374.3804.1 vs. uniprot
Match: A0A510XA60_9GAMM (3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=5 Tax=Halomonas TaxID=2745 RepID=A0A510XA60_9GAMM)

HSP 1 Score: 367 bits (941), Expect = 8.970e-124
Identity = 170/183 (92.90%), Postives = 180/183 (98.36%), Query Frame = 1 
Query:    1 FIYPDDMAAEGPFGDHTGYYNEVDHFPVFTITRMTMRRDAIYHSTYTGRPPDEPAILGVALNEVFVPILCKQFPEIVDFYLPPEGCSYRMAVVTMKKQYPGHAKRVMMGVWSFLRQFMYTKFVIVLDDDVDARNWEDVIWAITTRMDPARDTVMVENTPIDYLDFASPVSGLGSKMGLDATNK 549
            FI+P+DMA EGP+GDHTGYYNEV+ FPVFT+TRMTMRRDAIYHSTYTGRPPDEPAILG+ALNEVFVPIL KQFPEIVDFYLPPEGCSYRMAVVTMKKQYPGHAKRVMMGVWSFLRQFMYTKFVIVLDDDVDARNWEDVIWAITTRMDPARDT++VENTPIDYLDFASPV+GLGSKMG+DATNK
Sbjct:  273 FIHPEDMAPEGPYGDHTGYYNEVESFPVFTVTRMTMRRDAIYHSTYTGRPPDEPAILGLALNEVFVPILRKQFPEIVDFYLPPEGCSYRMAVVTMKKQYPGHAKRVMMGVWSFLRQFMYTKFVIVLDDDVDARNWEDVIWAITTRMDPARDTLLVENTPIDYLDFASPVAGLGSKMGMDATNK 455
[Close]
BLAST of mRNA_M-pyrifera_M_contig118374.3804.1 vs. uniprot
Match: A0A1H0ELT0_9GAMM (3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=66 Tax=Halomonadaceae TaxID=28256 RepID=A0A1H0ELT0_9GAMM)

HSP 1 Score: 365 bits (936), Expect = 6.970e-123
Identity = 170/183 (92.90%), Postives = 178/183 (97.27%), Query Frame = 1 
Query:    1 FIYPDDMAAEGPFGDHTGYYNEVDHFPVFTITRMTMRRDAIYHSTYTGRPPDEPAILGVALNEVFVPILCKQFPEIVDFYLPPEGCSYRMAVVTMKKQYPGHAKRVMMGVWSFLRQFMYTKFVIVLDDDVDARNWEDVIWAITTRMDPARDTVMVENTPIDYLDFASPVSGLGSKMGLDATNK 549
            FIYPDDMA EGP+GDHTGYYNEVD FPVFT+TRMTMR +AIYHSTYTGRPPDEPAILG+ALNEVFVPIL +QFPEIVDFYLPPEGCSYRMAVVTMKKQYPGHAKRVMMGVWSFLRQFMYTKFV+VLDDDVDAR+W+DVIWAITTRMDPARDTVMVENTPIDYLDFASPVSGLGSKMGLDAT K
Sbjct:  286 FIYPDDMAPEGPYGDHTGYYNEVDSFPVFTVTRMTMRENAIYHSTYTGRPPDEPAILGLALNEVFVPILRRQFPEIVDFYLPPEGCSYRMAVVTMKKQYPGHAKRVMMGVWSFLRQFMYTKFVVVLDDDVDARDWKDVIWAITTRMDPARDTVMVENTPIDYLDFASPVSGLGSKMGLDATTK 468
[Close]
BLAST of mRNA_M-pyrifera_M_contig118374.3804.1 vs. uniprot
Match: A0A1P8QZP3_9GAMM (3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=6 Tax=Halomonas TaxID=2745 RepID=A0A1P8QZP3_9GAMM)

HSP 1 Score: 363 bits (933), Expect = 1.550e-122
Identity = 168/183 (91.80%), Postives = 179/183 (97.81%), Query Frame = 1 
Query:    1 FIYPDDMAAEGPFGDHTGYYNEVDHFPVFTITRMTMRRDAIYHSTYTGRPPDEPAILGVALNEVFVPILCKQFPEIVDFYLPPEGCSYRMAVVTMKKQYPGHAKRVMMGVWSFLRQFMYTKFVIVLDDDVDARNWEDVIWAITTRMDPARDTVMVENTPIDYLDFASPVSGLGSKMGLDATNK 549
            FIYPDDMA EGP+GDHTGYYNEV+HFPVF++ RMTMRRDAIYHSTYTGRPPDEPAILG+ALNEVFVPIL KQFPEIVDFYLPPEGCSYRMAVVTMKKQYPGHAKRVMMGVWSFLRQFMYTKFV+VLDDDV AR+W+DVIWAITTRMDPARDTV+VENTPIDYLDFASPV+GLGSKMGLDAT+K
Sbjct:  273 FIYPDDMAPEGPYGDHTGYYNEVEHFPVFSVERMTMRRDAIYHSTYTGRPPDEPAILGLALNEVFVPILRKQFPEIVDFYLPPEGCSYRMAVVTMKKQYPGHAKRVMMGVWSFLRQFMYTKFVVVLDDDVSARDWKDVIWAITTRMDPARDTVLVENTPIDYLDFASPVAGLGSKMGLDATSK 455
[Close]
BLAST of mRNA_M-pyrifera_M_contig118374.3804.1 vs. uniprot
Match: A0A196QES3_9GAMM (3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=15 Tax=Marinobacter TaxID=2742 RepID=A0A196QES3_9GAMM)

HSP 1 Score: 363 bits (931), Expect = 2.670e-122
Identity = 168/183 (91.80%), Postives = 175/183 (95.63%), Query Frame = 1 
Query:    1 FIYPDDMAAEGPFGDHTGYYNEVDHFPVFTITRMTMRRDAIYHSTYTGRPPDEPAILGVALNEVFVPILCKQFPEIVDFYLPPEGCSYRMAVVTMKKQYPGHAKRVMMGVWSFLRQFMYTKFVIVLDDDVDARNWEDVIWAITTRMDPARDTVMVENTPIDYLDFASPVSGLGSKMGLDATNK 549
            FIYPDDMA EGPFGDHTGYYNEVDHFPVFT+ R+T RRD IYHSTYTGRPPDEPAILGVALNEVF+PIL KQFPEIVDFYLPPEGCSYR+AVVTMKKQYPGHAKRVMMGVWSFLRQFMYTKFVIV DDDV+ARNWEDVIWAITTRMDP RDT +VENTPIDYLDFASPVSGLGSKMG+DATNK
Sbjct:  273 FIYPDDMAPEGPFGDHTGYYNEVDHFPVFTVERVTHRRDPIYHSTYTGRPPDEPAILGVALNEVFIPILQKQFPEIVDFYLPPEGCSYRLAVVTMKKQYPGHAKRVMMGVWSFLRQFMYTKFVIVTDDDVNARNWEDVIWAITTRMDPVRDTTLVENTPIDYLDFASPVSGLGSKMGMDATNK 455
[Close]
BLAST of mRNA_M-pyrifera_M_contig118374.3804.1 vs. uniprot
Match: A0A086D518_9GAMM (3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=20 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A086D518_9GAMM)

HSP 1 Score: 363 bits (931), Expect = 3.210e-122
Identity = 169/183 (92.35%), Postives = 176/183 (96.17%), Query Frame = 1 
Query:    1 FIYPDDMAAEGPFGDHTGYYNEVDHFPVFTITRMTMRRDAIYHSTYTGRPPDEPAILGVALNEVFVPILCKQFPEIVDFYLPPEGCSYRMAVVTMKKQYPGHAKRVMMGVWSFLRQFMYTKFVIVLDDDVDARNWEDVIWAITTRMDPARDTVMVENTPIDYLDFASPVSGLGSKMGLDATNK 549
            +IYPDDMA EGP+GDHTGYYNEV+ FPVFT+ R+T RRD IYHSTYTGRPPDEPAILG+ALNEVFVPIL KQFPEIVDFYLPPEGCSYRMAVVTMKKQYPGHAKRVMMGVWSFLRQFMYTKFVIVLDDDVDARNWEDVIWAITTRMDPARDTVMVENTPIDYLDFASP +GLGSKMGLDATNK
Sbjct:  273 YIYPDDMAPEGPYGDHTGYYNEVEQFPVFTVERLTHRRDPIYHSTYTGRPPDEPAILGLALNEVFVPILRKQFPEIVDFYLPPEGCSYRMAVVTMKKQYPGHAKRVMMGVWSFLRQFMYTKFVIVLDDDVDARNWEDVIWAITTRMDPARDTVMVENTPIDYLDFASPTAGLGSKMGLDATNK 455
[Close]
BLAST of mRNA_M-pyrifera_M_contig118374.3804.1 vs. uniprot
Match: UBID_MARN8 (3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=129 Tax=root TaxID=1 RepID=UBID_MARN8)

HSP 1 Score: 361 bits (927), Expect = 1.080e-121
Identity = 168/183 (91.80%), Postives = 175/183 (95.63%), Query Frame = 1 
Query:    1 FIYPDDMAAEGPFGDHTGYYNEVDHFPVFTITRMTMRRDAIYHSTYTGRPPDEPAILGVALNEVFVPILCKQFPEIVDFYLPPEGCSYRMAVVTMKKQYPGHAKRVMMGVWSFLRQFMYTKFVIVLDDDVDARNWEDVIWAITTRMDPARDTVMVENTPIDYLDFASPVSGLGSKMGLDATNK 549
            FIYPDDMA EGPFGDHTGYYNEVD FPVFT+ R+T RRD IYHSTYTGRPPDEPAILGVALNEVF+PIL KQFPEIVDFYLPPEGCSYR+AVVTMKKQYPGHAKRVMMGVWSFLRQFMYTKFVIV DDDV+ARNWEDVIWAITTRMDPARDT +VENTPIDYLDFASPVSGLGSKMG+DATNK
Sbjct:  273 FIYPDDMAPEGPFGDHTGYYNEVDQFPVFTVERITHRRDPIYHSTYTGRPPDEPAILGVALNEVFIPILQKQFPEIVDFYLPPEGCSYRLAVVTMKKQYPGHAKRVMMGVWSFLRQFMYTKFVIVTDDDVNARNWEDVIWAITTRMDPARDTTLVENTPIDYLDFASPVSGLGSKMGMDATNK 455
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118374.3804.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A455UVB0_9GAMM3.460e-13498.36Uncharacterized protein n=1 Tax=Halomonas axialens... [more]
G4FC69_9GAMM7.900e-13298.913-octaprenyl-4-hydroxybenzoate carboxy-lyase n=38 ... [more]
H0J696_9GAMM1.080e-12997.813-octaprenyl-4-hydroxybenzoate carboxy-lyase n=60 ... [more]
A0A7M1Q708_9GAMM6.530e-12492.903-octaprenyl-4-hydroxybenzoate carboxy-lyase n=2 T... [more]
A0A510XA60_9GAMM8.970e-12492.903-octaprenyl-4-hydroxybenzoate carboxy-lyase n=5 T... [more]
A0A1H0ELT0_9GAMM6.970e-12392.903-octaprenyl-4-hydroxybenzoate carboxy-lyase n=66 ... [more]
A0A1P8QZP3_9GAMM1.550e-12291.803-octaprenyl-4-hydroxybenzoate carboxy-lyase n=6 T... [more]
A0A196QES3_9GAMM2.670e-12291.803-octaprenyl-4-hydroxybenzoate carboxy-lyase n=15 ... [more]
A0A086D518_9GAMM3.210e-12292.353-octaprenyl-4-hydroxybenzoate carboxy-lyase n=20 ... [more]
UBID_MARN81.080e-12191.803-octaprenyl-4-hydroxybenzoate carboxy-lyase n=129... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig118374contigM-pyrifera_M_contig118374:2..550 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score375.6
Seed ortholog evalue1.3e-101
Seed eggNOG ortholog1380358.JADJ01000012_gene687
Preferred nameubiD
KEGG rclassRC00391
KEGG koko:K03182,ko:K16239
KEGG ReactionR01238,R04985,R04986
KEGG Pathwayko00130,ko00627,ko01100,ko01110,ko01120,map00130,map00627,map01100,map01110,map01120
KEGG ModuleM00117
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008694,GO:0009058,GO:0009108,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0042180,GO:0042181,GO:0042802,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663
EggNOG free text desc.Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis
EggNOG OGs1MU62@1224,1RNH8@1236,1XIJM@135619,COG0043@1,COG0043@2
EC4.1.1.61,4.1.1.98
COG Functional cat.H
BiGG ReactioniECO111_1330.ECO111_4669,iIT341.HP0396
Best tax levelOceanospirillales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size549
Cds size531
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815703.333313-UTR-M-pyrifera_M_contig118374:1..191622815703.333313-UTR-M-pyrifera_M_contig118374:1..19Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig118374 2..19 +
1692277529.7271757-UTR-M-pyrifera_M_contig118374:1..191692277529.7271757-UTR-M-pyrifera_M_contig118374:1..19Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig118374 2..19 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815703.3465729-CDS-M-pyrifera_M_contig118374:19..5501622815703.3465729-CDS-M-pyrifera_M_contig118374:19..550Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig118374 20..550 +
1692277529.7382631-CDS-M-pyrifera_M_contig118374:19..5501692277529.7382631-CDS-M-pyrifera_M_contig118374:19..550Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig118374 20..550 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig118374.3804.1prot_M-pyrifera_M_contig118374.3804.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig118374 20..550 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig118374.3804.1

>prot_M-pyrifera_M_contig118374.3804.1 ID=prot_M-pyrifera_M_contig118374.3804.1|Name=mRNA_M-pyrifera_M_contig118374.3804.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=177bp
MAAEGPFGDHTGYYNEVDHFPVFTITRMTMRRDAIYHSTYTGRPPDEPAI
LGVALNEVFVPILCKQFPEIVDFYLPPEGCSYRMAVVTMKKQYPGHAKRV
MMGVWSFLRQFMYTKFVIVLDDDVDARNWEDVIWAITTRMDPARDTVMVE
NTPIDYLDFASPVSGLGSKMGLDATNK
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mRNA from alignment at M-pyrifera_M_contig118374:2..550+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig118374.3804.1 ID=mRNA_M-pyrifera_M_contig118374.3804.1|Name=mRNA_M-pyrifera_M_contig118374.3804.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=549bp|location=Sequence derived from alignment at M-pyrifera_M_contig118374:2..550+ (Macrocystis pyrifera P11B4 male)
TTTATCTACCCTGATGATATGGCGGCGGAAGGCCCTTTTGGTGACCACAC
CGGTTACTACAATGAGGTCGACCACTTCCCGGTGTTTACCATCACGCGGA
TGACCATGCGCCGTGATGCTATCTACCACTCGACCTATACGGGGCGTCCG
CCGGATGAGCCGGCGATTCTGGGCGTGGCGCTCAACGAAGTCTTCGTGCC
CATCCTGTGTAAACAGTTCCCCGAAATTGTCGACTTCTACCTGCCGCCGG
AAGGCTGTTCATACCGCATGGCGGTGGTCACTATGAAGAAGCAGTACCCC
GGCCACGCCAAACGCGTGATGATGGGGGTGTGGAGCTTTCTGCGTCAGTT
TATGTATACCAAGTTTGTGATTGTGCTGGATGACGACGTGGACGCACGCA
ATTGGGAAGACGTGATTTGGGCGATCACCACCCGGATGGATCCCGCACGC
GACACCGTGATGGTCGAAAATACCCCGATTGATTATCTCGATTTCGCCTC
GCCAGTCTCAGGCCTGGGCTCGAAAATGGGGCTTGATGCTACCAATAAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig118374:2..550+

>mRNA_M-pyrifera_M_contig118374.3804.1 ID=mRNA_M-pyrifera_M_contig118374.3804.1|Name=mRNA_M-pyrifera_M_contig118374.3804.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1062bp|location=Sequence derived from alignment at M-pyrifera_M_contig118374:2..550+ (Macrocystis pyrifera P11B4 male)
ATGGCGGCGGAAGGCCCTTTTGGTGACCACACCGGTTACTACAATGAGGT
CGACCACTTCCCGGTGTTTACCATCACGCGGATGACCATGCGCCGTGATG
CTATCTACCACTCGACCTATACGGGGCGTCCGCCGGATGAGCCGGCGATT
CTGGGCGTGGCGCTCAACGAAGTCTTCGTGCCCATCCTGTGTAAACAGTT
CCCCGAAATTGTCGACTTCTACCTGCCGCCGGAAGGCTGTTCATACCGCA
TGGCGGTGGTCACTATGAAGAAGCAGTACCCCGGCCACGCCAAACGCGTG
ATGATGGGGGTGTGGAGCTTTCTGCGTCAGTTTATGTATACCAAGTTTGT
GATTGTGCTGGATGACGACGTGGACGCACGCAATTGGGAAGACGTGATTT
GGGCGATCACCACCCGGATGGATCCCGCACGCGACACCGTGATGGTCGAA
AATACCCCGATTGATTATCTCGATTTCGCCTCGCCAGTCTCAGGCCTGGG
CTCGAAAATGGGGCTTGATGCTACCAATAAGATGGCGGCGGAAGGCCCTT
TTGGTGACCACACCGGTTACTACAATGAGGTCGACCACTTCCCGGTGTTT
ACCATCACGCGGATGACCATGCGCCGTGATGCTATCTACCACTCGACCTA
TACGGGGCGTCCGCCGGATGAGCCGGCGATTCTGGGCGTGGCGCTCAACG
AAGTCTTCGTGCCCATCCTGTGTAAACAGTTCCCCGAAATTGTCGACTTC
TACCTGCCGCCGGAAGGCTGTTCATACCGCATGGCGGTGGTCACTATGAA
GAAGCAGTACCCCGGCCACGCCAAACGCGTGATGATGGGGGTGTGGAGCT
TTCTGCGTCAGTTTATGTATACCAAGTTTGTGATTGTGCTGGATGACGAC
GTGGACGCACGCAATTGGGAAGACGTGATTTGGGCGATCACCACCCGGAT
GGATCCCGCACGCGACACCGTGATGGTCGAAAATACCCCGATTGATTATC
TCGATTTCGCCTCGCCAGTCTCAGGCCTGGGCTCGAAAATGGGGCTTGAT
GCTACCAATAAG
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