mRNA_M-pyrifera_M_contig118273.3781.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig118273.3781.1 vs. uniprot
Match: A0A6H5KEM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEM1_9PHAE) HSP 1 Score: 150 bits (379), Expect = 9.560e-41 Identity = 73/90 (81.11%), Postives = 80/90 (88.89%), Query Frame = 1
Query: 25 GTHTDTTFFTAIPCASAPGLEILQPSSGRWVRPEAADNCRPGADIMLLAGELLQVFGEGGGYQAAVHRVVRPENMPEPRVSTPLLVRGVA 294
GTHTDTTF T IPCASAPGLEI+QPS+GRWVRPEA+ +CRPG+D+MLLAGELLQVFG G YQAAVHRVVRP EPRVSTPLL+RGVA
Sbjct: 158 GTHTDTTFLTVIPCASAPGLEIIQPSTGRWVRPEASRDCRPGSDVMLLAGELLQVFGRGR-YQAAVHRVVRPAGSTEPRVSTPLLLRGVA 246
BLAST of mRNA_M-pyrifera_M_contig118273.3781.1 vs. uniprot
Match: D7FP64_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP64_ECTSI) HSP 1 Score: 150 bits (378), Expect = 3.740e-40 Identity = 72/90 (80.00%), Postives = 80/90 (88.89%), Query Frame = 1
Query: 25 GTHTDTTFFTAIPCASAPGLEILQPSSGRWVRPEAADNCRPGADIMLLAGELLQVFGEGGGYQAAVHRVVRPENMPEPRVSTPLLVRGVA 294
GTHTDTTF T IPCASAPGLEI+QPS+GRWVRPEA+ +CRPG+D+MLLAGELLQVFG G YQAAVHRVVRP EPRVSTPLL+RG+A
Sbjct: 307 GTHTDTTFLTVIPCASAPGLEIIQPSTGRWVRPEASRDCRPGSDVMLLAGELLQVFGRGR-YQAAVHRVVRPAGSTEPRVSTPLLLRGIA 395
BLAST of mRNA_M-pyrifera_M_contig118273.3781.1 vs. uniprot
Match: A0A7S4D4K1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D4K1_HETAK) HSP 1 Score: 93.2 bits (230), Expect = 4.880e-22 Identity = 52/87 (59.77%), Postives = 58/87 (66.67%), Query Frame = 1
Query: 25 GTHTDTTFFTAIPCASAPGLEILQPSSGRWVRPEAADNCRPGADIMLLAGELLQVFGEGGGYQAAVHRVVRPENMPEPRVSTPLLVR 285
G HTDTTF T IPC++ PGLE+ P+ WVRPE A CRPG DI++L GELLQV G Y AAVHRVV RVS PLLVR
Sbjct: 9 GAHTDTTFVTLIPCSNIPGLEVFSPALDGWVRPEPA--CRPGRDIIILPGELLQVLS-AGHYPAAVHRVVSVGGGTA-RVSAPLLVR 91
BLAST of mRNA_M-pyrifera_M_contig118273.3781.1 vs. uniprot
Match: A0A7S4JAE6_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4JAE6_9EUKA) HSP 1 Score: 82.0 bits (201), Expect = 2.220e-16 Identity = 45/88 (51.14%), Postives = 56/88 (63.64%), Query Frame = 1
Query: 31 HTDTTFFTAIPCASAPGLEILQPSSGRWVRPEAADNCRPGADIMLLAGELLQVFGEGGGYQAAVHRVVRPENMPEPRVSTPLLVRGVA 294
HTD T+FT IPCA+ PGLE+ + WV PE D G +M+L GE LQ+ +G Y AA+HRVVRP PR+S PLL+RG A
Sbjct: 189 HTDGTWFTVIPCAAVPGLEVFASAEHGWVSPER-DAAATGRMVMVLTGEFLQLLSDGE-YTAALHRVVRPLG-DAPRLSAPLLMRGSA 273
BLAST of mRNA_M-pyrifera_M_contig118273.3781.1 vs. uniprot
Match: A0A7S3ZL26_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZL26_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 1.240e-14 Identity = 49/93 (52.69%), Postives = 57/93 (61.29%), Query Frame = 1
Query: 25 GTHTDTTFFTAIPCASAPGLEILQPSSGRWVRPEAADNCRPGADIMLLA--GELLQVFGEGGGYQAAVHRVVRPENMPEPRVSTPLLVRGVAR 297
G HTDT+FFT +P A PGLE+L PS RWV PEA D G ++LA GE L+V G +QA+VHRV E RVSTPLLVR R
Sbjct: 224 GAHTDTSFFTLVPFARVPGLEVLDPSLQRWVCPEA-DTPSKGEGHLVLAMPGEFLEVASHGS-FQASVHRV---RGGSEKRVSTPLLVRADLR 311
BLAST of mRNA_M-pyrifera_M_contig118273.3781.1 vs. uniprot
Match: A0A1Z5J8Q8_FISSO (2OG-FeII_Oxy domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J8Q8_FISSO) HSP 1 Score: 67.0 bits (162), Expect = 7.770e-11 Identity = 41/91 (45.05%), Postives = 55/91 (60.44%), Query Frame = 1
Query: 25 GTHTDTTFFTAIPCASAPGLEILQPSSGRWVRPEA---ADNCRPGADIMLLAGELLQVFGEGGGYQAAVHRVVRPENMPEPRVSTPLLVRG 288
G HTD+TF TA+P A+ PGLE+ ++ RW RPEA + +CR ++L+ GE LQ+ A+VHRVV E R S PLL+RG
Sbjct: 497 GAHTDSTFITAVPVATVPGLEVYDEAAERWYRPEALLTSSHCRY---VVLVPGEFLQLLTRQE-ILASVHRVVVGA---EQRFSAPLLLRG 580
BLAST of mRNA_M-pyrifera_M_contig118273.3781.1 vs. uniprot
Match: A0A7S4J017_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4J017_9EUKA) HSP 1 Score: 58.2 bits (139), Expect = 3.050e-8 Identity = 36/87 (41.38%), Postives = 48/87 (55.17%), Query Frame = 1
Query: 31 HTDTTFFTAIPCASAPGLEILQPSSGRWVRPEAADNCRPGADIMLLAGELLQVFGEGGGYQAAVHRVVRPENMP-EPRVSTPLLVRG 288
HTD T+FT IPCA PGLE+ S W E + R G D+ +L+G+ L+ G Y+A+ HRV P + R S PLL+R
Sbjct: 76 HTDGTWFTVIPCAKQPGLEVRTASG--WCSVE--EQSRHGIDVAVLSGDFLESLSNGK-YKASSHRVALPASAGVAARSSAPLLMRA 157
BLAST of mRNA_M-pyrifera_M_contig118273.3781.1 vs. uniprot
Match: F0YG17_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YG17_AURAN) HSP 1 Score: 51.2 bits (121), Expect = 2.510e-5 Identity = 40/96 (41.67%), Postives = 52/96 (54.17%), Query Frame = 1
Query: 4 SSQTPLSGTHTDTTFFTAIPCASAPGLEILQPSSGRWVRPEAADNCRPGADIMLL-AGELLQVFGEGGGYQAAVHRVVRPENMPEPRVSTPLLVRG 288
S +TP HTD TF T P + PGLE ++ W P AA + D+ ++ AG LL++ + A VHRVV PEPR STPLL+RG
Sbjct: 207 SDETPFDA-HTDATFLTVAPFS--PGLEFYDGAA--WHAPRAAAD----DDLAVVWAGSLLEIVD--ATFAATVHRVV---GTPEPRTSTPLLLRG 288 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118273.3781.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig118273.3781.1 >prot_M-pyrifera_M_contig118273.3781.1 ID=prot_M-pyrifera_M_contig118273.3781.1|Name=mRNA_M-pyrifera_M_contig118273.3781.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=99bp PSSQTPLSGTHTDTTFFTAIPCASAPGLEILQPSSGRWVRPEAADNCRPGback to top mRNA from alignment at M-pyrifera_M_contig118273:96..392+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig118273.3781.1 ID=mRNA_M-pyrifera_M_contig118273.3781.1|Name=mRNA_M-pyrifera_M_contig118273.3781.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=297bp|location=Sequence derived from alignment at M-pyrifera_M_contig118273:96..392+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig118273:96..392+ >mRNA_M-pyrifera_M_contig118273.3781.1 ID=mRNA_M-pyrifera_M_contig118273.3781.1|Name=mRNA_M-pyrifera_M_contig118273.3781.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=594bp|location=Sequence derived from alignment at M-pyrifera_M_contig118273:96..392+ (Macrocystis pyrifera P11B4 male)back to top |