mRNA_M-pyrifera_M_contig118234.3778.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig118234.3778.1 vs. uniprot
Match: A0A7Y5CE77_9BACT (Uncharacterized protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7Y5CE77_9BACT) HSP 1 Score: 172 bits (437), Expect = 8.490e-48 Identity = 103/188 (54.79%), Postives = 119/188 (63.30%), Query Frame = 1
Query: 1 NNRSREITDPETGLPNISSGSTAPDG-----GPGYQFDINGDGVLETIPFYNRPDGTNVINNTITQGLVSAFANPGRAVADGVGFSLSGILTDNGDGDRVGVTLDYLNSLEETELLSAPRVTTMNRKPAVIADFLTQSFVTSAFSDVQAVSGGLGGGAAAVSSTQIIPEQFIFGITFSVTPQISGDNQ 549
NNR+REI PE G + G G Y DINGDG+ E IP Y +PDGTNV NNTIT ++ A ANPG A F+L+ + DN DGD V VT+DYLNSL ETELLSAPRVTT+NRKPAVIAD LTQ+F TSA S + A G ++T + QF FGIT SVTPQISG NQ
Sbjct: 263 NNRAREI--PELGEQTTTGGGXXXXXXXTTTGVTYPVDINGDGITEDIPIYTKPDGTNVFNNTITSAVLDAVANPGPAGE----FNLAATILDNADGDVVSVTMDYLNSLAETELLSAPRVTTLNRKPAVIADILTQTFNTSATSIIVASDNAFGSSGTLAATTILQFTQFTFGITLSVTPQISGGNQ 444
BLAST of mRNA_M-pyrifera_M_contig118234.3778.1 vs. uniprot
Match: A0A831UKF7_9BACT (Uncharacterized protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A831UKF7_9BACT) HSP 1 Score: 162 bits (411), Expect = 1.200e-44 Identity = 84/154 (54.55%), Postives = 109/154 (70.78%), Query Frame = 1
Query: 88 YQFDINGDGVLETIPFYNRPDGTNVINNTITQGLVSAFANPGRAVADGVGFSLSGILTDNGDGDRVGVTLDYLNSLEETELLSAPRVTTMNRKPAVIADFLTQSFVTSAFSDVQAVSGGLGGGAAAVSSTQIIPEQFIFGITFSVTPQISGDNQ 549
YQ+DINGDG +E IPFY RPDG+++I NTI++G++ A ++PG D FS GI+TDN DGD++ VT DYLNSL+E+ELLSAPRVTTMN KPAVIAD T+ FVT+ ++ + G GG + Q P+ F FGIT SVTP + G +Q
Sbjct: 206 YQYDINGDGFMEIIPFYQRPDGSSIITNTISEGIIRAASSPGPP-GD---FSFEGIITDNEDGDKLRVTFDYLNSLDESELLSAPRVTTMNNKPAVIADITTEYFVTAVYTRLFVTPGTWGGDSTMGYEQQPFPQDFHFGITLSVTPYVCGGDQ 355
BLAST of mRNA_M-pyrifera_M_contig118234.3778.1 vs. uniprot
Match: A0A7C3X419_9BACT (Uncharacterized protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C3X419_9BACT) HSP 1 Score: 159 bits (401), Expect = 7.600e-43 Identity = 82/156 (52.56%), Postives = 105/156 (67.31%), Query Frame = 1
Query: 88 YQFDINGDGVLETIPFYNRPDGTNVINNTITQGLVSAFANPGRAVADGVGFSLSGILTDNGDGDRVGVTLDYLNSLEETELLSAPRVTTMNRKPAVIADFLTQSFVTSAFSDVQAVSGGLGGGA--AAVSSTQIIPEQFIFGITFSVTPQISGDNQ 549
Y +DINGDGV E +PFY RPDG+NV+ N++TQG +S NP A +L + DN DGD++GV DYLNSL E+ELLSAPRVTTMNRKPAV+ADF T+ ++T +++V GG GG + +S Q P F FGI SVTPQI ++Q
Sbjct: 248 YSYDINGDGVDEEVPFYTRPDGSNVVRNSVTQGTISGLVNPPAPAAAASTLNLVTKIIDNADGDQLGVVFDYLNSLRESELLSAPRVTTMNRKPAVVADFQTEYYLTQVYNEVYVSEGGFGGSQTQSVISQPQFSP--FNFGIALSVTPQIRDNDQ 401
BLAST of mRNA_M-pyrifera_M_contig118234.3778.1 vs. uniprot
Match: A0A1V6EU24_9BACT (Type IV pilus biogenesis and competence protein PilQ n=1 Tax=Candidatus Hydrogenedentes bacterium ADurb.Bin101 TaxID=1852847 RepID=A0A1V6EU24_9BACT) HSP 1 Score: 157 bits (396), Expect = 2.100e-42 Identity = 85/158 (53.80%), Postives = 107/158 (67.72%), Query Frame = 1
Query: 79 GPGYQFDINGDGVLETIPFYNRPDGTNVINNTITQGLVSAFANPGRAVADGVGFSLSGILTDNGDGDRVGVTLDYLNSLEETELLSAPRVTTMNRKPAVIADFLTQSFVTSAFSDVQAVSG-GLGGGAAAVSSTQIIPEQFIFGITFSVTPQISGDNQ 549
G Y +DINGDGV E IPFY+RPDGT I NTIT ++S NP + + FS+ G + DN DGD++ VT DYL+ LEE+ELLSAPRVTTMNRKPAVIADF T+ FV+S ++V G G GA+ ++P+ + FGI SVTPQI +NQ
Sbjct: 204 GESYYYDINGDGVDEQIPFYSRPDGTPTITNTITDAVISGLINPTASASPT--FSILGNILDNADGDKLSVTFDYLDGLEESELLSAPRVTTMNRKPAVIADFATEYFVSSVSTEVYNNLGYGYSSGASTSFVQNVVPQPYNFGIALSVTPQIRDNNQ 359
BLAST of mRNA_M-pyrifera_M_contig118234.3778.1 vs. uniprot
Match: A0A7V2TT02_9BACT (Uncharacterized protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7V2TT02_9BACT) HSP 1 Score: 156 bits (394), Expect = 2.500e-42 Identity = 79/155 (50.97%), Postives = 110/155 (70.97%), Query Frame = 1
Query: 88 YQFDINGDGVLETIPFYNRPDGTNVINNTITQGLVSAFANPGRAVADGVGFSLSGILTDNGDGDRVGVTLDYLNSLEETELLSAPRVTTMNRKPAVIADFLTQSFVTSAFSDV-QAVSGGLGGGAAAVSSTQIIPEQFIFGITFSVTPQISGDNQ 549
Y +DINGDG+ ET+PFY RPDG++V NNT T + NP A FS+ G + ++GDGD++ +TLDYL+S+ E+ELLSAPRVTTMNRKPAVIADF T+ +V++ ++D+ Q GG+ GG ++IP+ + FGI+ SVTPQI ++Q
Sbjct: 169 YNYDINGDGIDETVPFYTRPDGSSVFNNTFTDATIGGLINPASTGAPT--FSILGNIINSGDGDKLSLTLDYLDSIGESELLSAPRVTTMNRKPAVIADFTTEYYVSAIYTDIYQNYYGGVSGGNTTNFINRLIPQSYNFGISLSVTPQIRDNDQ 321
BLAST of mRNA_M-pyrifera_M_contig118234.3778.1 vs. uniprot
Match: A0A7V3DHR8_9BACT (Tetratricopeptide repeat protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7V3DHR8_9BACT) HSP 1 Score: 159 bits (403), Expect = 6.010e-42 Identity = 83/152 (54.61%), Postives = 108/152 (71.05%), Query Frame = 1
Query: 97 DINGDGVLETIPFYNRPDGTNVINNTITQGLVSAFANPGRAVADGVG-FSLSGILTDNGDGDRVGVTLDYLNSLEETELLSAPRVTTMNRKPAVIADFLTQSFVTSAFSDVQAVSGGLGGGAAAVSSTQIIPEQFIFGITFSVTPQISGDNQ 549
DINGDGV E IPFY+RPDGT++I NTI ++AFA+PG G FSL+G+LT+N DGD V DYL++LEE+ELLSAPRVTTMNRKPAVIAD ++ +V +++ + +G LG + ++P +F FGIT SVTPQISG +Q
Sbjct: 697 DINGDGVAEPIPFYSRPDGTSIITNTIASAAMAAFASPGAQTGVNPGSFSLTGVLTNNKDGDNATVAFDYLSTLEESELLSAPRVTTMNRKPAVIADLSSEYYVAEVRTELVSTTGNLGSSGNIGYTQSVMPTRFDFGITLSVTPQISGSDQ 848
BLAST of mRNA_M-pyrifera_M_contig118234.3778.1 vs. uniprot
Match: A0A7C4UU27_9BACT (Tetratricopeptide repeat protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C4UU27_9BACT) HSP 1 Score: 155 bits (393), Expect = 1.340e-40 Identity = 81/154 (52.60%), Postives = 100/154 (64.94%), Query Frame = 1
Query: 88 YQFDINGDGVLETIPFYNRPDGTNVINNTITQGLVSAFANPGRAVADGVGFSLSGILTDNGDGDRVGVTLDYLNSLEETELLSAPRVTTMNRKPAVIADFLTQSFVTSAFSDVQAVSGGLGGGAAAVSSTQIIPEQFIFGITFSVTPQISGDNQ 549
Y +DINGDGV E +PFY RPDG+ VI N+IT G +S NP A SL + DN DGD++ V DYLNSL E+ELLSAPRVTTMNRKPAV+ADF T+ ++T +++V GG GG TQ + F FGI SVTPQI ++Q
Sbjct: 800 YSYDINGDGVDEEVPFYVRPDGSQVIRNSITSGTISGLVNPPAPAAAASTLSLVTKIIDNADGDKLSVAFDYLNSLRESELLSAPRVTTMNRKPAVVADFQTEYYLTQVYNEVYLTEGGFGGSQTQSVITQPMFSPFNFGIALSVTPQIRDNDQ 953
BLAST of mRNA_M-pyrifera_M_contig118234.3778.1 vs. uniprot
Match: A0A1V5YRY1_9BACT (Type IV pilus biogenesis and competence protein PilQ n=1 Tax=Candidatus Hydrogenedentes bacterium ADurb.Bin170 TaxID=1852848 RepID=A0A1V5YRY1_9BACT) HSP 1 Score: 152 bits (383), Expect = 1.420e-40 Identity = 81/155 (52.26%), Postives = 104/155 (67.10%), Query Frame = 1
Query: 88 YQFDINGDGVLETIPFYNRPDGTNVINNTITQGLVSAFANPGRAVADGVGFSLSGILTDNGDGDRVGVTLDYLNSLEETELLSAPRVTTMNRKPAVIADFLTQSFVTSAFSDVQAVSG-GLGGGAAAVSSTQIIPEQFIFGITFSVTPQISGDNQ 549
Y +DINGDG E IPFY RPDG VI+NTIT ++ NP + F++ G + +N DGD++ +T DYL+ LEE+ELLSAPRVTTMNRKPA+IADF T+ FV+S + V A +G G+GG A I+P + FGI SVTPQI +NQ
Sbjct: 198 YYYDINGDGKDEAIPFYTRPDGKPVISNTITDSTIAGLVNPVASAPST--FNIVGNILNNADGDKLSLTFDYLDGLEESELLSAPRVTTMNRKPAIIADFATEYFVSSVDTQVYAFAGSGIGGNAMTSFVQNIVPSAYNFGIALSVTPQIRDNNQ 350
BLAST of mRNA_M-pyrifera_M_contig118234.3778.1 vs. uniprot
Match: A0A7C3AB71_9BACT (Uncharacterized protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C3AB71_9BACT) HSP 1 Score: 150 bits (378), Expect = 7.700e-40 Identity = 81/154 (52.60%), Postives = 99/154 (64.29%), Query Frame = 1
Query: 88 YQFDINGDGVLETIPFYNRPDGTNVINNTITQGLVSAFANPGRAVADGVGFSLSGILTDNGDGDRVGVTLDYLNSLEETELLSAPRVTTMNRKPAVIADFLTQSFVTSAFSDVQAVSGGLGGGAAAVSSTQIIPEQFIFGITFSVTPQISGDNQ 549
Y +D+N DGV E +PFY+RPDG++VI NTIT+G ++ NP A A F G + N DGD +GV D+L+SL E+ELLSAPRVTTMNRKPAVIADF T+ FV S + V G GG I P F FGI FSVTPQI ++Q
Sbjct: 189 YDYDVNADGVDEPVPFYSRPDGSSVIRNTITEGTLAGLVNPAAAGAQPT-FQFLGKILQNRDGDSLGVAFDFLDSLTESELLSAPRVTTMNRKPAVIADFATEYFVASIDTQVFTSEAGFGGTPVTSYVQNITPVSFNFGIAFSVTPQIRDNDQ 341
BLAST of mRNA_M-pyrifera_M_contig118234.3778.1 vs. uniprot
Match: A0A1V6ETR7_9BACT (Type IV pilus biogenesis and competence protein PilQ n=1 Tax=Candidatus Hydrogenedentes bacterium ADurb.Bin101 TaxID=1852847 RepID=A0A1V6ETR7_9BACT) HSP 1 Score: 153 bits (386), Expect = 1.150e-39 Identity = 93/190 (48.95%), Postives = 116/190 (61.05%), Query Frame = 1
Query: 1 NNRSREITDPETGLPNISSGST------APDGGPGYQFDINGDGVLETIPFYNRPDGTNVINNTITQGLVSAFANPGRAVADGVGFSLSGILTDNGDGDRVGVTLDYLNSLEETELLSAPRVTTMNRKPAVIADFLTQSFVTSAFSDVQAVSG-GLGGGAAAVSSTQIIPEQFIFGITFSVTPQISGDNQ 549
N+R R+I TG +SGST G Y +D+NGDG E IPFY RPDGT I NTIT ++S NP + FS+ G + +N DGD++ VT DYL+ LEE+ELLSAPRVTTMNRKPAVIADF T+ FV+S ++V G GL GA + P+ + FGI SVTPQI +NQ
Sbjct: 708 NSRERQIETLGTG----TSGSTDTXXXXXXTSGESYYYDVNGDGTDEQIPFYTRPDGTPTITNTITDAVISGLVNPTASAPST--FSILGNILENADGDKLSVTFDYLDGLEESELLSAPRVTTMNRKPAVIADFATEYFVSSVNTEVYNNLGYGLSTGATTSFVQNVTPQPYNFGIALSVTPQIRDNNQ 891 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118234.3778.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig118234.3778.1 >prot_M-pyrifera_M_contig118234.3778.1 ID=prot_M-pyrifera_M_contig118234.3778.1|Name=mRNA_M-pyrifera_M_contig118234.3778.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=183bp NNRSREITDPETGLPNISSGSTAPDGGPGYQFDINGDGVLETIPFYNRPDback to top mRNA from alignment at M-pyrifera_M_contig118234:2..550- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig118234.3778.1 ID=mRNA_M-pyrifera_M_contig118234.3778.1|Name=mRNA_M-pyrifera_M_contig118234.3778.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=549bp|location=Sequence derived from alignment at M-pyrifera_M_contig118234:2..550- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig118234:2..550- >mRNA_M-pyrifera_M_contig118234.3778.1 ID=mRNA_M-pyrifera_M_contig118234.3778.1|Name=mRNA_M-pyrifera_M_contig118234.3778.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1098bp|location=Sequence derived from alignment at M-pyrifera_M_contig118234:2..550- (Macrocystis pyrifera P11B4 male)back to top |