mRNA_M-pyrifera_M_contig118195.3769.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig118195.3769.1 vs. uniprot
Match: A0A1Z9UJT7_9GAMM (Acyl-CoA dehydrogenase n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1Z9UJT7_9GAMM) HSP 1 Score: 229 bits (585), Expect = 5.620e-72 Identity = 115/149 (77.18%), Postives = 133/149 (89.26%), Query Frame = 1
Query: 1 SGMNAERILIASESVGDGRYFIRKGADYARERVVFGRAIGQNQGIQFPIARAFAEVEAAEAILDKACRLYEAGDPSTGTYANMAKMLASEAAWNAGDTCMQTYGGFSMSEEYDIERKFREARLYRIAPISTNLILSFIAEHELDLPRSY 447
SGMNAERILIA+E VGD R+FI+K +DYA ER VFGR IG+NQGIQFPIARAFA+ EAAEA+L KACRLYE+GD S GTYANMAK+L SEA+W A DT MQT+GGF+++EEYD+ERKFREARLY+IAPISTNLILS++AE EL LPRSY
Sbjct: 241 SGMNAERILIAAECVGDARWFIKKASDYASEREVFGRPIGRNQGIQFPIARAFAQTEAAEAVLXKACRLYESGDTS-GTYANMAKLLTSEASWAAADTXMQTFGGFAVAEEYDVERKFREARLYQIAPISTNLILSYLAERELGLPRSY 388
BLAST of mRNA_M-pyrifera_M_contig118195.3769.1 vs. uniprot
Match: A0A1Z8WWS9_9GAMM (Acyl-CoA dehydrogenase n=1 Tax=Methylococcaceae bacterium TMED69 TaxID=1986766 RepID=A0A1Z8WWS9_9GAMM) HSP 1 Score: 227 bits (578), Expect = 6.550e-71 Identity = 112/149 (75.17%), Postives = 130/149 (87.25%), Query Frame = 1
Query: 1 SGMNAERILIASESVGDGRYFIRKGADYARERVVFGRAIGQNQGIQFPIARAFAEVEAAEAILDKACRLYEAGDPSTGTYANMAKMLASEAAWNAGDTCMQTYGGFSMSEEYDIERKFREARLYRIAPISTNLILSFIAEHELDLPRSY 447
SGMNAERILIA+E +GD R+FI K Y++ER VFGR IGQNQGIQFPIARAFAE EAAEAILDKAC YE GD S GTYANMAK+L+SEA+W+A + CMQ +GGF+++EEYD+ERKFRE RLY+IAPISTNLILS++AEHEL LPRSY
Sbjct: 242 SGMNAERILIAAECIGDARWFISKATQYSKEREVFGRPIGQNQGIQFPIARAFAETEAAEAILDKACYFYEEGDTS-GTYANMAKLLSSEASWSAAEICMQAHGGFAVAEEYDVERKFRETRLYQIAPISTNLILSYLAEHELGLPRSY 389
BLAST of mRNA_M-pyrifera_M_contig118195.3769.1 vs. uniprot
Match: A0A523NZY6_9PROT (Acyl-CoA dehydrogenase n=2 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523NZY6_9PROT) HSP 1 Score: 219 bits (558), Expect = 6.360e-68 Identity = 107/149 (71.81%), Postives = 128/149 (85.91%), Query Frame = 1
Query: 1 SGMNAERILIASESVGDGRYFIRKGADYARERVVFGRAIGQNQGIQFPIARAFAEVEAAEAILDKACRLYEAGDPSTGTYANMAKMLASEAAWNAGDTCMQTYGGFSMSEEYDIERKFREARLYRIAPISTNLILSFIAEHELDLPRSY 447
SGMNAERILI+ E +GD R+FI+K +DYA +R VFGR IGQNQGIQFPIAR +A+ EAAE ++ KA L++ GDP G+ ANMAKMLASEA+W A DTC+QT+GGF ++EEYD+ERKFREARLYRIAPISTNLILS++AEHEL LPRSY
Sbjct: 240 SGMNAERILISGECIGDARWFIKKASDYANDRQVFGRPIGQNQGIQFPIARVYAQTEAAELMVHKAAELFDRGDPC-GSEANMAKMLASEASWEAADTCVQTFGGFGVAEEYDVERKFREARLYRIAPISTNLILSYLAEHELGLPRSY 387
BLAST of mRNA_M-pyrifera_M_contig118195.3769.1 vs. uniprot
Match: A0A661BK59_9GAMM (Acyl-CoA dehydrogenase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661BK59_9GAMM) HSP 1 Score: 219 bits (557), Expect = 8.290e-68 Identity = 108/148 (72.97%), Postives = 126/148 (85.14%), Query Frame = 1
Query: 4 GMNAERILIASESVGDGRYFIRKGADYARERVVFGRAIGQNQGIQFPIARAFAEVEAAEAILDKACRLYEAGDPSTGTYANMAKMLASEAAWNAGDTCMQTYGGFSMSEEYDIERKFREARLYRIAPISTNLILSFIAEHELDLPRSY 447
GMNAERILIA+E +GD R+FI K +DYARER VFGR IGQNQGIQFPIA A+A EAA+ ++ KAC L+E+G+P G ANMAK+LASEA+W A DTCMQT+GGF +EEYD+ERKFREARLYR APISTN+ILS+IAEH LDLPRSY
Sbjct: 238 GMNAERILIAAECIGDARWFIAKASDYARERQVFGRPIGQNQGIQFPIAEAYAATEAADLMVHKACSLFESGEPC-GPQANMAKLLASEASWMAADTCMQTFGGFGFAEEYDVERKFREARLYRTAPISTNMILSYIAEHVLDLPRSY 384
BLAST of mRNA_M-pyrifera_M_contig118195.3769.1 vs. uniprot
Match: A0A2E2QIX6_9PROT (Acyl-CoA dehydrogenase n=5 Tax=Sneathiella TaxID=510690 RepID=A0A2E2QIX6_9PROT) HSP 1 Score: 218 bits (555), Expect = 1.660e-67 Identity = 106/149 (71.14%), Postives = 131/149 (87.92%), Query Frame = 1
Query: 1 SGMNAERILIASESVGDGRYFIRKGADYARERVVFGRAIGQNQGIQFPIARAFAEVEAAEAILDKACRLYEAGDPSTGTYANMAKMLASEAAWNAGDTCMQTYGGFSMSEEYDIERKFREARLYRIAPISTNLILSFIAEHELDLPRSY 447
+GMNAERILIASE +GD +FI+ +DYAR+R VFGR+IGQNQGIQFPIARA+A+ +AA+ ++ +ACRLY+AG+P G ANM+KMLASEA+W AG+ C+QT+GGF +EEYD+ERKFRE RLY+IAPISTNLILSFIAEHEL+LPRSY
Sbjct: 237 TGMNAERILIASECLGDADWFIKTASDYARDRKVFGRSIGQNQGIQFPIARAYADTKAAKLMVQEACRLYDAGEPC-GAEANMSKMLASEASWAAGEACIQTHGGFGFAEEYDVERKFRETRLYQIAPISTNLILSFIAEHELELPRSY 384
BLAST of mRNA_M-pyrifera_M_contig118195.3769.1 vs. uniprot
Match: A0A350RGJ6_9ACTN (Acyl-CoA dehydrogenase (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A350RGJ6_9ACTN) HSP 1 Score: 210 bits (535), Expect = 1.190e-66 Identity = 105/148 (70.95%), Postives = 125/148 (84.46%), Query Frame = 1
Query: 4 GMNAERILIASESVGDGRYFIRKGADYARERVVFGRAIGQNQGIQFPIARAFAEVEAAEAILDKACRLYEAGDPSTGTYANMAKMLASEAAWNAGDTCMQTYGGFSMSEEYDIERKFREARLYRIAPISTNLILSFIAEHELDLPRSY 447
GMNAERILIA+E VGDGRYFI K + YA ER VF R IGQNQG+QFPIAR++ EVEAA +++KA +L++AG + G ANMAKMLASEA+W AGD CMQT+GGF+ ++EY IERKFRE RLY+IAPISTNLILSF+AEH LD+PRSY
Sbjct: 70 GMNAERILIAAECVGDGRYFIDKASAYASERTVFDRPIGQNQGVQFPIARSYTEVEAASLMVEKAAKLFDAG-LACGAEANMAKMLASEASWKAGDVCMQTHGGFAFAKEYHIERKFRETRLYQIAPISTNLILSFVAEHVLDMPRSY 216
BLAST of mRNA_M-pyrifera_M_contig118195.3769.1 vs. uniprot
Match: A0A2E2YRX5_9GAMM (Acyl-CoA dehydrogenase n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E2YRX5_9GAMM) HSP 1 Score: 213 bits (543), Expect = 1.030e-65 Identity = 105/148 (70.95%), Postives = 127/148 (85.81%), Query Frame = 1
Query: 4 GMNAERILIASESVGDGRYFIRKGADYARERVVFGRAIGQNQGIQFPIARAFAEVEAAEAILDKACRLYEAGDPSTGTYANMAKMLASEAAWNAGDTCMQTYGGFSMSEEYDIERKFREARLYRIAPISTNLILSFIAEHELDLPRSY 447
GMNAERILIA+E +GDGRYFI K ++YARER VFGR IG+NQG+QFPIAR +AE+EAA +++K RL++AG+ + G ANMAKMLASEA+W AGD CMQT+GGF+ S+EY IERKFRE RLY+IAPISTNLILS+I EH LDLPRS+
Sbjct: 237 GMNAERILIAAECIGDGRYFIDKASNYAREREVFGRPIGKNQGVQFPIARCYAEIEAAALMVEKGARLFDAGE-ACGAEANMAKMLASEASWRAGDMCMQTHGGFAFSKEYHIERKFRETRLYQIAPISTNLILSYIGEHVLDLPRSF 383
BLAST of mRNA_M-pyrifera_M_contig118195.3769.1 vs. uniprot
Match: A0A2E7DD67_9PROT (Acyl-CoA dehydrogenase (Fragment) n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7DD67_9PROT) HSP 1 Score: 210 bits (534), Expect = 2.540e-65 Identity = 100/148 (67.57%), Postives = 127/148 (85.81%), Query Frame = 1
Query: 4 GMNAERILIASESVGDGRYFIRKGADYARERVVFGRAIGQNQGIQFPIARAFAEVEAAEAILDKACRLYEAGDPSTGTYANMAKMLASEAAWNAGDTCMQTYGGFSMSEEYDIERKFREARLYRIAPISTNLILSFIAEHELDLPRSY 447
GMNAERILI+ ES+GD R+F++K DYA +R VFGR IGQNQGIQFPIA+A+A EAA + ++A +L+EAG+P G +NMAKMLA++AAW AGDTC+QT+GGF+ +EEYD+ERK+REARLYRIAPISTNL+L+++AEH L LPRSY
Sbjct: 158 GMNAERILISHESLGDARWFLKKAVDYANDRNVFGRPIGQNQGIQFPIAKAYANTEAAALMAERAAQLFEAGEPC-GAESNMAKMLAADAAWEAGDTCVQTFGGFAFAEEYDVERKYREARLYRIAPISTNLVLAYVAEHVLGLPRSY 304
BLAST of mRNA_M-pyrifera_M_contig118195.3769.1 vs. uniprot
Match: A0A2E7HK32_9PROT (Acyl-CoA dehydrogenase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7HK32_9PROT) HSP 1 Score: 212 bits (539), Expect = 5.100e-65 Identity = 106/149 (71.14%), Postives = 125/149 (83.89%), Query Frame = 1
Query: 1 SGMNAERILIASESVGDGRYFIRKGADYARERVVFGRAIGQNQGIQFPIARAFAEVEAAEAILDKACRLYEAGDPSTGTYANMAKMLASEAAWNAGDTCMQTYGGFSMSEEYDIERKFREARLYRIAPISTNLILSFIAEHELDLPRSY 447
SGMNAERILIASE +GD R+FI + YA +RVVFGR IGQNQGIQFPIA+AFA +EAA ++ +ACR YEAG+ GT ANMAKMLA++A+W A +TCMQT+GGF + EYDIERK+RE+RLYR APISTNLILSF+AEHEL LPRSY
Sbjct: 244 SGMNAERILIASECIGDARFFIDRATAYANDRVVFGRPIGQNQGIQFPIAQAFAHMEAAALMVAEACRRYEAGE-QPGTQANMAKMLAADASWEAAETCMQTHGGFGFAREYDIERKWRESRLYRTAPISTNLILSFLAEHELGLPRSY 391
BLAST of mRNA_M-pyrifera_M_contig118195.3769.1 vs. uniprot
Match: A0A2E5M5W0_9GAMM (Acyl-CoA dehydrogenase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E5M5W0_9GAMM) HSP 1 Score: 211 bits (536), Expect = 1.230e-64 Identity = 104/148 (70.27%), Postives = 125/148 (84.46%), Query Frame = 1
Query: 4 GMNAERILIASESVGDGRYFIRKGADYARERVVFGRAIGQNQGIQFPIARAFAEVEAAEAILDKACRLYEAGDPSTGTYANMAKMLASEAAWNAGDTCMQTYGGFSMSEEYDIERKFREARLYRIAPISTNLILSFIAEHELDLPRSY 447
GMNAERILIA+E VGDGRYFI K DYA ER VFG+ IG+NQG+QFPIAR +AEVEAA ++DKA R+++AG+P G ANMAKMLASEA+W AGD CMQT+GGF+ ++EY IERKFRE RLY+IAPISTNLILS++ EH L +PRS+
Sbjct: 239 GMNAERILIAAECVGDGRYFIDKARDYASEREVFGQPIGKNQGVQFPIARCYAEVEAAGLMVDKAARMFDAGEPC-GAEANMAKMLASEASWRAGDVCMQTHGGFAFAKEYHIERKFRETRLYQIAPISTNLILSYLGEHVLGMPRSF 385 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118195.3769.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig118195.3769.1 >prot_M-pyrifera_M_contig118195.3769.1 ID=prot_M-pyrifera_M_contig118195.3769.1|Name=mRNA_M-pyrifera_M_contig118195.3769.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=148bp MNAERILIASESVGDGRYFIRKGADYARERVVFGRAIGQNQGIQFPIARAback to top mRNA from alignment at M-pyrifera_M_contig118195:3..452+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig118195.3769.1 ID=mRNA_M-pyrifera_M_contig118195.3769.1|Name=mRNA_M-pyrifera_M_contig118195.3769.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=450bp|location=Sequence derived from alignment at M-pyrifera_M_contig118195:3..452+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig118195:3..452+ >mRNA_M-pyrifera_M_contig118195.3769.1 ID=mRNA_M-pyrifera_M_contig118195.3769.1|Name=mRNA_M-pyrifera_M_contig118195.3769.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=888bp|location=Sequence derived from alignment at M-pyrifera_M_contig118195:3..452+ (Macrocystis pyrifera P11B4 male)back to top |