mRNA_M-pyrifera_M_contig118170.3764.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig118170.3764.1 vs. uniprot
Match: A0A067CN99_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CN99_SAPPC) HSP 1 Score: 110 bits (275), Expect = 1.070e-26 Identity = 62/149 (41.61%), Postives = 81/149 (54.36%), Query Frame = 1
Query: 1 MQQVPVFRPTAEEFAEGFTAYVKKI-EPQCSAVGLARVIPPAGWAGRRLSSQLGSAADQLDVEIPKPIQQKVAGGKGVFQTMNIIEPAQKLAAFRKAALAFGEKRGECGTDKEVERKFWKSVR--FEPPTYGADFEGSLFEEDLQ--PW 432
M+ PVFRPT EFA F Y++ + EPQC A+GL +++PPA W R S D + +I P+ Q VAG KGVF + + L AF+ A A D +ER FWK +R EPP YGAD GSLF++D + PW
Sbjct: 1 MEDAPVFRPTPSEFAS-FPRYIRTVVEPQCQAIGLCKIVPPAAWVAR------ASGYDDVAFDIHTPLSQHVAGKKGVFNVDLVERKSMTLDAFKALAAAKDTIAHLLDDDDAIERTFWKGLRPTMEPPVYGADLVGSLFQDDAKSNPW 142
BLAST of mRNA_M-pyrifera_M_contig118170.3764.1 vs. uniprot
Match: UPI001899A93C (lysine-specific demethylase 4A n=1 Tax=Nematolebias whitei TaxID=451745 RepID=UPI001899A93C) HSP 1 Score: 105 bits (263), Expect = 2.180e-24 Identity = 58/142 (40.85%), Postives = 82/142 (57.75%), Query Frame = 1
Query: 10 VPVFRPTAEEFAEGFTAYVKKIEPQ-CSAVGLARVIPPAGWAGRRLSSQLGSAADQLDVEIPKPIQQKVAGGKGVFQTMNIIEPAQKLAAFRKAALAFGEKRGECGTDKEVERKFWKSVRFEPPTYGADFEGSLFEEDLQPW 432
+ F PTAEEF + F YV +E + GLA+++PP GW R GS D D+ IP PIQQ V+G G+F NI + + + FR+ A ++ R +E+ERK+WK+V F PP YGAD GSL++ D++ W
Sbjct: 15 IMTFYPTAEEFKD-FNRYVAYMESKGAHKAGLAKIVPPKGWKPR------GSYDDIDDLVIPAPIQQVVSGQSGLFTQYNIQKKSMTVREFRRIANSYKFYRPHYDDFEELERKYWKNVTFNPPIYGADVNGSLYDPDIKEW 149
BLAST of mRNA_M-pyrifera_M_contig118170.3764.1 vs. uniprot
Match: A0A1V9ZIF9_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZIF9_9STRA) HSP 1 Score: 105 bits (263), Expect = 5.240e-24 Identity = 62/144 (43.06%), Postives = 82/144 (56.94%), Query Frame = 1
Query: 13 PVFRPTAEEFAEGFTAYVKKI-EPQCSAVGLARVIPPAGWAGRRLSSQLGSAADQLDVEIPKPIQQKVAGGKGVFQTMNIIEPAQKLAAFRKAALAFGEKRGECGTDKEVERKFWKSVR--FEPPTYGADFEGSLFE-EDLQPW 432
PVFRPT +EFA F YV+ + EPQC ++GL +V+PPAGW+ R + D + EI P+ Q VAG KGVF + + AAF+ ALA + + E ER FWK +R +PP YGAD GSLF+ + PW
Sbjct: 4 PVFRPTPDEFAS-FPRYVRTVVEPQCKSIGLCKVVPPAGWSAR------SGSYDDVVFEIHTPLSQHVAGKKGVFNVDLVERKSMSAAAFK--ALATAKDLADPLDVNEAERAFWKGLRPTMDPPVYGADLVGSLFDANEPNPW 138
BLAST of mRNA_M-pyrifera_M_contig118170.3764.1 vs. uniprot
Match: T0QUH7_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QUH7_SAPDV) HSP 1 Score: 105 bits (262), Expect = 8.390e-24 Identity = 61/149 (40.94%), Postives = 80/149 (53.69%), Query Frame = 1
Query: 1 MQQVPVFRPTAEEFAEGFTAYVKKI-EPQCSAVGLARVIPPAGWAGRRLSSQLGSAADQLDVEIPKPIQQKVAGGKGVFQTMNIIEPAQKLAAFRKAALAFGEKRGECGTDKEVERKFWKSVR--FEPPTYGADFEGSLFEEDL--QPW 432
M PVFRPT EFA F Y++ + EPQC +GL +++PP GW R S D + +I P+ Q VAG KGVF + + L AF+ A+A + D +ER FWK +R EPP YGAD GSLF++D PW
Sbjct: 19 MVDAPVFRPTPSEFAS-FPRYIRTVVEPQCQTIGLCKIVPPLGWVAR------ASGYDNVAFDIHTPLSQHVAGKKGVFNVDLVERKSMTLDAFKALAVA-KDTVTHLLDDDAIERAFWKGLRPTMEPPVYGADLVGSLFQDDALSNPW 159
BLAST of mRNA_M-pyrifera_M_contig118170.3764.1 vs. uniprot
Match: UPI00148F58E3 (lysine-specific demethylase 4A isoform X1 n=4 Tax=Notolabrus celidotus TaxID=1203425 RepID=UPI00148F58E3) HSP 1 Score: 104 bits (259), Expect = 3.460e-23 Identity = 60/142 (42.25%), Postives = 80/142 (56.34%), Query Frame = 1
Query: 10 VPVFRPTAEEFAEGFTAYVKKIEPQ-CSAVGLARVIPPAGWAGRRLSSQLGSAADQLDVEIPKPIQQKVAGGKGVFQTMNIIEPAQKLAAFRKAALAFGEKRGECGTDKEVERKFWKSVRFEPPTYGADFEGSLFEEDLQPW 432
+ F PTAEEF + FT Y+ IE Q GLA+++PP W R GS D D+ IP PIQQ V G G+FQ NI + A + FRK A + +E+ERK+WK+V F PP YGAD GSL++ +++ W
Sbjct: 15 IMTFYPTAEEF-KNFTRYIAYIESQGAHKAGLAKIVPPKEWKPR------GSYDDIDDLVIPAPIQQVVTGQSGLFQQYNIQKKAMTVREFRKIANSDKFCSPHYDDFEELERKYWKNVTFNPPIYGADVNGSLYDPEVKEW 149
BLAST of mRNA_M-pyrifera_M_contig118170.3764.1 vs. uniprot
Match: A0A0S7JPS2_9TELE (KDM4A n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7JPS2_9TELE) HSP 1 Score: 100 bits (248), Expect = 4.440e-23 Identity = 57/142 (40.14%), Postives = 79/142 (55.63%), Query Frame = 1
Query: 10 VPVFRPTAEEFAEGFTAYVKKIEPQ-CSAVGLARVIPPAGWAGRRLSSQLGSAADQLDVEIPKPIQQKVAGGKGVFQTMNIIEPAQKLAAFRKAALAFGEKRGECGTDKEVERKFWKSVRFEPPTYGADFEGSLFEEDLQPW 432
+ F PTAEEF + F+ Y+ IE + GLA+++PP W R GS D D+ IP PIQQ V G G+F NI + A + FRK A + +E+ERK+WK++ F PP YGAD GSL++ D++ W
Sbjct: 15 IMTFYPTAEEF-KNFSRYIAYIESKGAHRAGLAKIVPPKEWRPR------GSYEDIDDLVIPAPIQQVVTGQSGLFTQYNIQKRAMTVKEFRKIANSDKFCSPHYDDFEELERKYWKNLTFNPPLYGADVNGSLYDPDIEEW 149
BLAST of mRNA_M-pyrifera_M_contig118170.3764.1 vs. uniprot
Match: A0A7S0MTN4_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0MTN4_9CHLO) HSP 1 Score: 103 bits (257), Expect = 6.240e-23 Identity = 54/143 (37.76%), Postives = 79/143 (55.24%), Query Frame = 1
Query: 7 QVPVFRPTAEEFAEGFTAYVKKIEPQCSAVGLARVIPPAGWAGRRLSSQLGSAADQLDVEIPKPIQQKVAGGKGVFQTMNII-EPAQKLAAFRKAALAFGEKRGECGTDKEVERKFWKSVRFEPPTYGADFEGSLFEEDLQPW 432
+VPVF P+ ++ F YV+ IEPQ + VG+ +++PP W R++ D +D IPKPI+Q G KG+F+T+ + +P FR A + E+ER+FWK + + PP YGAD EGSLF+E W
Sbjct: 7 EVPVFYPSMDDMRGSFERYVESIEPQFAHVGICKIVPPPAWTPRKVGY------DDIDGFIPKPIRQHATGRKGLFRTLMLEGKPMSVRDEFRPMAESKENLPKTPDDMAELEREFWKRITYTPPLYGADVEGSLFDEKCNGW 143
BLAST of mRNA_M-pyrifera_M_contig118170.3764.1 vs. uniprot
Match: UPI001BD1CAD1 (lysine-specific demethylase 4A isoform X1 n=4 Tax=Cheilinus undulatus TaxID=241271 RepID=UPI001BD1CAD1) HSP 1 Score: 103 bits (257), Expect = 6.420e-23 Identity = 60/142 (42.25%), Postives = 78/142 (54.93%), Query Frame = 1
Query: 10 VPVFRPTAEEFAEGFTAYVKKIEPQ-CSAVGLARVIPPAGWAGRRLSSQLGSAADQLDVEIPKPIQQKVAGGKGVFQTMNIIEPAQKLAAFRKAALAFGEKRGECGTDKEVERKFWKSVRFEPPTYGADFEGSLFEEDLQPW 432
+ F PTAEEF + FT Y+ IE Q GLA+++PP W R GS D D+ IP PIQQ V G G+FQ NI + FRK A + +E+ERK+WK+V F PP YGAD GSL++ D++ W
Sbjct: 15 IMTFYPTAEEF-KNFTRYIAYIESQGAHKAGLAKIVPPKEWKPR------GSYDDIDDLVIPAPIQQVVTGQSGLFQQYNIQRKPMTVREFRKIANSDKFCSPHYDDFEELERKYWKNVTFNPPIYGADVNGSLYDPDVKEW 149
BLAST of mRNA_M-pyrifera_M_contig118170.3764.1 vs. uniprot
Match: A0A3Q3FAS8_9LABR (Lysine (K)-specific demethylase 4A, genome duplicate b n=1 Tax=Labrus bergylta TaxID=56723 RepID=A0A3Q3FAS8_9LABR) HSP 1 Score: 101 bits (252), Expect = 9.590e-23 Identity = 59/142 (41.55%), Postives = 78/142 (54.93%), Query Frame = 1
Query: 10 VPVFRPTAEEFAEGFTAYVKKIEPQ-CSAVGLARVIPPAGWAGRRLSSQLGSAADQLDVEIPKPIQQKVAGGKGVFQTMNIIEPAQKLAAFRKAALAFGEKRGECGTDKEVERKFWKSVRFEPPTYGADFEGSLFEEDLQPW 432
+ F PTAEEF + FT Y+ IE Q GLA+++PP W R S D D+ IP PIQQ V G G+FQ NI + L FRK A + +E+ERK+WK+V F PP YGAD GSL++ +++ W
Sbjct: 32 IMTFYPTAEEF-KNFTRYIAYIESQGAHKAGLAKIVPPKEWKPR------SSYDDIDDLMIPAPIQQVVTGQSGLFQQYNIQRKSMTLREFRKIANSDKFCSPHYDDFEELERKYWKNVTFNPPIYGADVNGSLYDPEVKEW 166
BLAST of mRNA_M-pyrifera_M_contig118170.3764.1 vs. uniprot
Match: A0A3Q3FCN9_9LABR (Lysine (K)-specific demethylase 4A, genome duplicate b n=1 Tax=Labrus bergylta TaxID=56723 RepID=A0A3Q3FCN9_9LABR) HSP 1 Score: 96.3 bits (238), Expect = 9.990e-23 Identity = 58/136 (42.65%), Postives = 74/136 (54.41%), Query Frame = 1
Query: 10 VPVFRPTAEEFAEGFTAYVKKIEPQ-CSAVGLARVIPPAGWAGRRLSSQLGSAADQLDVEIPKPIQQKVAGGKGVFQTMNIIEPAQKLAAFRKAALAFGEKRGECGTDKEVERKFWKSVRFEPPTYGADFEGSLFE 414
+ F PTAEEF + FT Y+ IE Q GLA+++PP W R S D D+ IP PIQQ V G G+FQ NI + L FRK A + +E+ERK+WK+V F PP YGAD GSL++
Sbjct: 10 IMTFYPTAEEF-KNFTRYIAYIESQGAHKAGLAKIVPPKEWKPR------SSYDDIDDLMIPAPIQQVVTGQSGLFQQYNIQRKSMTLREFRKIANSDKFCSPHYDDFEELERKYWKNVTFNPPIYGADVNGSLYD 138 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118170.3764.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig118170.3764.1 >prot_M-pyrifera_M_contig118170.3764.1 ID=prot_M-pyrifera_M_contig118170.3764.1|Name=mRNA_M-pyrifera_M_contig118170.3764.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=144bp MQQVPVFRPTAEEFAEGFTAYVKKIEPQCSAVGLARVIPPAGWAGRRLSSback to top mRNA from alignment at M-pyrifera_M_contig118170:94..525+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig118170.3764.1 ID=mRNA_M-pyrifera_M_contig118170.3764.1|Name=mRNA_M-pyrifera_M_contig118170.3764.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=432bp|location=Sequence derived from alignment at M-pyrifera_M_contig118170:94..525+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig118170:94..525+ >mRNA_M-pyrifera_M_contig118170.3764.1 ID=mRNA_M-pyrifera_M_contig118170.3764.1|Name=mRNA_M-pyrifera_M_contig118170.3764.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=864bp|location=Sequence derived from alignment at M-pyrifera_M_contig118170:94..525+ (Macrocystis pyrifera P11B4 male)back to top |