mRNA_M-pyrifera_M_contig118157.3762.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig118157.3762.1
Unique NamemRNA_M-pyrifera_M_contig118157.3762.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig118157.3762.1 vs. uniprot
Match: UPI001600BBBD (asparagine synthetase domain-containing protein 1-like isoform X1 n=2 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI001600BBBD)

HSP 1 Score: 75.9 bits (185), Expect = 4.140e-14
Identity = 34/77 (44.16%), Postives = 49/77 (63.64%), Query Frame = 1
Query:   31 EALHGIEGPFAFVYWQAAVKRLWFGRDPMGRRSLLVCRPRVLQDGTRQLFAVSSVAFGVDREEREWIEVPPDSVYCV 261
            +    I+GP+AF+YWQA  K+LWFGRD  GRRSLL   P    DG   +FA+SSV    + ++ +W E+P   ++C+
Sbjct:  119 QLFQSIKGPWAFIYWQACSKQLWFGRDYFGRRSLLWRLP----DGETDVFALSSVIARPEPQDGQWQEIPAKGIFCI 191          
BLAST of mRNA_M-pyrifera_M_contig118157.3762.1 vs. uniprot
Match: I1CDD0_RHIO9 (Glutamine amidotransferase type-2 domain-containing protein n=1 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1CDD0_RHIO9)

HSP 1 Score: 74.7 bits (182), Expect = 9.720e-14
Identity = 38/89 (42.70%), Postives = 52/89 (58.43%), Query Frame = 1
Query:    1 RESSTLFNAEEALHGIEGPFAFVYWQAAVKRLWFGRDPMGRRSLLVCRPRVLQDGTRQLFAVSSVAFGVDREEREWIEVPPDSVYCVDF 267
            RESS+          IEGP+AFV+WQA+ K+LWFGRD +GRRSLL C     + G+  L +V   + G       W E+  + +YC+DF
Sbjct:   86 RESSSQDEILSIFSRIEGPYAFVFWQASTKKLWFGRDCLGRRSLLTCH----KQGSLMLSSVGLKSEG-------WKELEANGIYCIDF 163          
BLAST of mRNA_M-pyrifera_M_contig118157.3762.1 vs. uniprot
Match: A0A167LER9_PHYB8 (Glutamine amidotransferase type-2 domain-containing protein n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A167LER9_PHYB8)

HSP 1 Score: 74.3 bits (181), Expect = 1.420e-13
Identity = 38/79 (48.10%), Postives = 49/79 (62.03%), Query Frame = 1
Query:   31 EALHGIEGPFAFVYWQAAVKRLWFGRDPMGRRSLLVCRPRVLQDGTRQLFAV--SSVAFGVDREEREWIEVPPDSVYCV 261
            + L  IEGPFAFV+WQA   RLWFGRD +GRRSLL  R + L + +  L +V  SS +     +   W EVP D +YC+
Sbjct:  118 DILTQIEGPFAFVFWQAHTNRLWFGRDCLGRRSLLWARSKSLTNKSFMLSSVGPSSASSDSGSDNVVWEEVPADGLYCI 196          
BLAST of mRNA_M-pyrifera_M_contig118157.3762.1 vs. uniprot
Match: A0A7S4HL17_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HL17_9EUKA)

HSP 1 Score: 71.2 bits (173), Expect = 3.480e-13
Identity = 34/81 (41.98%), Postives = 47/81 (58.02%), Query Frame = 1
Query:   31 EALHGIEGPFAFVYWQAAVKRLWFGRDPMGRRSLLVCRPRVLQDGTRQLFAVSSVAFGVDR--EEREWIEVPPDSVYCVDF 267
            E L  + GPFAF YWQA  K LWFGRDP+GRRSLL+ R      G  +    S ++  +       EW+EVP ++++ + F
Sbjct:   47 ETLSSVHGPFAFCYWQADKKTLWFGRDPLGRRSLLLHRSYQGDKGAARFMLCSCLSKELQEFYPADEWVEVPIENIHSITF 127          
BLAST of mRNA_M-pyrifera_M_contig118157.3762.1 vs. uniprot
Match: A0A6P4Z7A0_BRABE (asparagine synthetase domain-containing protein 1-like isoform X1 n=2 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4Z7A0_BRABE)

HSP 1 Score: 72.4 bits (176), Expect = 6.840e-13
Identity = 37/96 (38.54%), Postives = 53/96 (55.21%), Query Frame = 1
Query:    4 ESSTLFNAEEALHG----------IEGPFAFVYWQAAVKRLWFGRDPMGRRSLLVCRPRVLQDGTRQLFAVSSVAFGVDREEREWIEVPPDSVYCV 261
            ++S L     A+HG          I+GP+AF+YWQA  K+LWFGRD  GRRSLL         G   +FA+SSV      ++ +W E+P   ++C+
Sbjct:   99 DTSVLLQLLAAVHGEEGLLQVFQSIKGPWAFIYWQAGSKQLWFGRDYFGRRSLL-------WRGETDVFALSSVTVRPALQDSQWQEIPAKGIFCI 187          
BLAST of mRNA_M-pyrifera_M_contig118157.3762.1 vs. uniprot
Match: A0A4U0VRD4_9BASI (Glutamine amidotransferase type-2 domain-containing protein n=1 Tax=Rhodotorula sp. CCFEE 5036 TaxID=1965284 RepID=A0A4U0VRD4_9BASI)

HSP 1 Score: 71.2 bits (173), Expect = 1.730e-12
Identity = 37/76 (48.68%), Postives = 47/76 (61.84%), Query Frame = 1
Query:   31 EALHGIEGPFAFVYWQAAVKRLWFGRDPMGRRSLLVCRPRVLQDGTRQLFAVSSVAFGVDREEREWIEVPPDSVYC 258
            EA+  +EGP+AFVY+QAA KRLW+GRDP+GRRSLL   P    DG   L   S+        EREW EV   +++ 
Sbjct:  123 EAIGPVEGPYAFVYFQAAPKRLWYGRDPLGRRSLLSSGP----DGQFALALASNAPPPAGDSEREWQEVDCGAIHA 194          
BLAST of mRNA_M-pyrifera_M_contig118157.3762.1 vs. uniprot
Match: A0A433PLE8_9FUNG (Uncharacterized protein n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433PLE8_9FUNG)

HSP 1 Score: 69.3 bits (168), Expect = 1.970e-12
Identity = 34/80 (42.50%), Postives = 50/80 (62.50%), Query Frame = 1
Query:   31 EALHGIEGPFAFVYWQAAVKRLWFGRDPMGRRSLLVCRPRVLQDGTRQLFAVSSVAFGVDREERE--WIEVPPDSVYCVD 264
            E L  I+GP+A V+WQA+ K+LWFGRD +GRRSLL  RPR   D        + ++ G + E +   + E+P + +YC+D
Sbjct:   19 ETLERIDGPYAIVFWQASAKKLWFGRDCLGRRSLLWHRPRSGDDSFMLTSVGALISAGGNSEVQSPFFEELPANGIYCLD 98          
BLAST of mRNA_M-pyrifera_M_contig118157.3762.1 vs. uniprot
Match: A0A2H3IU13_WOLCO (Glutamine amidotransferase type-2 domain-containing protein n=1 Tax=Wolfiporia cocos (strain MD-104) TaxID=742152 RepID=A0A2H3IU13_WOLCO)

HSP 1 Score: 70.1 bits (170), Expect = 4.370e-12
Identity = 38/91 (41.76%), Postives = 53/91 (58.24%), Query Frame = 1
Query:    1 RESSTLFNAEEALHGIEGPFAFVYWQAAVKRLWFGRDPMGRRSLLVCRPRVLQDGTRQLFAVSSVAFG--VDREEREWIEVPPDSVYCVDF 267
            RE ST+    + L  IEGP+ FVY+Q A++RL+F RDP+GRRSLL+ RP          F  +SV+ G  VD +  E +    D + C+D 
Sbjct:  101 REQSTIEGVRDCLGSIEGPYVFVYYQRALQRLYFARDPLGRRSLLIHRPTTASPN----FLATSVSIGPHVDYDLEELLT---DGICCIDI 184          
BLAST of mRNA_M-pyrifera_M_contig118157.3762.1 vs. uniprot
Match: A0A1J7IVX7_9PEZI (Glutamine amidotransferase type-2 domain-containing protein n=1 Tax=Coniochaeta ligniaria NRRL 30616 TaxID=1408157 RepID=A0A1J7IVX7_9PEZI)

HSP 1 Score: 70.1 bits (170), Expect = 4.380e-12
Identity = 40/77 (51.95%), Postives = 46/77 (59.74%), Query Frame = 1
Query:   31 EALHGIEGPFAFVYWQAAVKRLWFGRDPMGRRSLLVCRPRVLQDGTRQLFAVSSVAFGVDREEREWIEVPPDSVYCV 261
            EAL  IEGPFAFVY+ A  K L+FGRD +GRRSLL+C      D T     +SSVA   D +   W EV  D VY V
Sbjct:  122 EALRSIEGPFAFVYFDAPSKTLYFGRDRLGRRSLLICH-----DDTEGSLVISSVAETCDDK---WKEVEADGVYSV 190          
BLAST of mRNA_M-pyrifera_M_contig118157.3762.1 vs. uniprot
Match: A0A511KJA3_RHOTO (BRCT domain-containing protein n=1 Tax=Rhodosporidium toruloides TaxID=5286 RepID=A0A511KJA3_RHOTO)

HSP 1 Score: 70.1 bits (170), Expect = 4.570e-12
Identity = 38/75 (50.67%), Postives = 51/75 (68.00%), Query Frame = 1
Query:   34 ALHGIEGPFAFVYWQAAVKRLWFGRDPMGRRSLLVCRPRVLQDGTRQLFAVSSVAFGVDREEREWIEVPPDSVYC 258
            A+  +EGP+AFVY+QA+  RL+FGRDP+GRRSLLV  P      +  LF VS+ A G D   +EW EV  ++V+C
Sbjct:  171 AIRDVEGPYAFVYFQASNSRLYFGRDPLGRRSLLVHAPT---PASPYLFLVSN-APGADFPLQEWEEVSCEAVHC 241          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118157.3762.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001600BBBD4.140e-1444.16asparagine synthetase domain-containing protein 1-... [more]
I1CDD0_RHIO99.720e-1442.70Glutamine amidotransferase type-2 domain-containin... [more]
A0A167LER9_PHYB81.420e-1348.10Glutamine amidotransferase type-2 domain-containin... [more]
A0A7S4HL17_9EUKA3.480e-1341.98Hypothetical protein (Fragment) n=1 Tax=Vannella s... [more]
A0A6P4Z7A0_BRABE6.840e-1338.54asparagine synthetase domain-containing protein 1-... [more]
A0A4U0VRD4_9BASI1.730e-1248.68Glutamine amidotransferase type-2 domain-containin... [more]
A0A433PLE8_9FUNG1.970e-1242.50Uncharacterized protein n=1 Tax=Jimgerdemannia fla... [more]
A0A2H3IU13_WOLCO4.370e-1241.76Glutamine amidotransferase type-2 domain-containin... [more]
A0A1J7IVX7_9PEZI4.380e-1251.95Glutamine amidotransferase type-2 domain-containin... [more]
A0A511KJA3_RHOTO4.570e-1250.67BRCT domain-containing protein n=1 Tax=Rhodosporid... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig118157contigM-pyrifera_M_contig118157:224..544 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score74.3
Seed ortholog evalue3.2e-11
Seed eggNOG ortholog936053.I1CDD0
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004066,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006528,GO:0006529,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0032787,GO:0034641,GO:0042802,GO:0042803,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046983,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
EggNOG free text desc.asparagine
EggNOG OGs1GSZ3@112252,38G4S@33154,3NVJ7@4751,COG0367@1,KOG0573@2759
COG Functional cat.E
Best tax levelFungi incertae sedis
Best eggNOG OGNA|NA|NA
Exons2
Model size267
Cds size267
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815701.0909448-CDS-M-pyrifera_M_contig118157:223..4121622815701.0909448-CDS-M-pyrifera_M_contig118157:223..412Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig118157 224..412 -
1692277528.6442778-CDS-M-pyrifera_M_contig118157:223..4121692277528.6442778-CDS-M-pyrifera_M_contig118157:223..412Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig118157 224..412 -
1622815701.10103-CDS-M-pyrifera_M_contig118157:466..5441622815701.10103-CDS-M-pyrifera_M_contig118157:466..544Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig118157 467..544 -
1692277528.6573207-CDS-M-pyrifera_M_contig118157:466..5441692277528.6573207-CDS-M-pyrifera_M_contig118157:466..544Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig118157 467..544 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig118157.3762.1prot_M-pyrifera_M_contig118157.3762.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig118157 224..544 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig118157.3762.1

>prot_M-pyrifera_M_contig118157.3762.1 ID=prot_M-pyrifera_M_contig118157.3762.1|Name=mRNA_M-pyrifera_M_contig118157.3762.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=89bp
RESSTLFNAEEALHGIEGPFAFVYWQAAVKRLWFGRDPMGRRSLLVCRPR
VLQDGTRQLFAVSSVAFGVDREEREWIEVPPDSVYCVDF
back to top

mRNA from alignment at M-pyrifera_M_contig118157:224..544-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig118157.3762.1 ID=mRNA_M-pyrifera_M_contig118157.3762.1|Name=mRNA_M-pyrifera_M_contig118157.3762.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=321bp|location=Sequence derived from alignment at M-pyrifera_M_contig118157:224..544- (Macrocystis pyrifera P11B4 male)
AGGGAGAGCTCCACGCTGTTCAATGCAGAGGAAGCCCTGCACGGCATCGA GGGCCCCTTCGCCTTTGTGTACTGGCAGGTGCGCGCCGCCACTGCCCGCC CGCCTTTGCAACGCGTACTGACGGTGGAGAAGGCTGCCGTGAAGCGGCTG TGGTTCGGAAGGGACCCCATGGGCAGGCGCTCCCTCCTCGTGTGCAGGCC CCGTGTTCTGCAGGATGGTACAAGGCAGCTGTTTGCTGTTTCGTCAGTGG CTTTTGGTGTTGATAGGGAAGAGCGAGAGTGGATAGAAGTGCCCCCTGAT AGTGTCTACTGCGTGGACTTT
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig118157:224..544-

>mRNA_M-pyrifera_M_contig118157.3762.1 ID=mRNA_M-pyrifera_M_contig118157.3762.1|Name=mRNA_M-pyrifera_M_contig118157.3762.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=534bp|location=Sequence derived from alignment at M-pyrifera_M_contig118157:224..544- (Macrocystis pyrifera P11B4 male)
AGGGAGAGCTCCACGCTGTTCAATGCAGAGGAAGCCCTGCACGGCATCGA
GGGCCCCTTCGCCTTTGTGTACTGGCAGAGGGAGAGCTCCACGCTGTTCA
ATGCAGAGGAAGCCCTGCACGGCATCGAGGGCCCCTTCGCCTTTGTGTAC
TGGCAGGCTGCCGTGAAGCGGCTGTGGTTCGGAAGGGACCCCATGGGCAG
GCGCTCCCTCCTCGTGTGCAGGCCCCGTGTTCTGCAGGATGGTACAAGGC
AGCTGTTTGCTGTTTCGTCAGTGGCTTTTGGTGTTGATAGGGAAGAGCGA
GAGTGGATAGAAGTGCCCCCTGATAGTGTCTACTGCGTGGACTTTGCTGC
CGTGAAGCGGCTGTGGTTCGGAAGGGACCCCATGGGCAGGCGCTCCCTCC
TCGTGTGCAGGCCCCGTGTTCTGCAGGATGGTACAAGGCAGCTGTTTGCT
GTTTCGTCAGTGGCTTTTGGTGTTGATAGGGAAGAGCGAGAGTGGATAGA
AGTGCCCCCTGATAGTGTCTACTGCGTGGACTTT
back to top