mRNA_M-pyrifera_M_contig117507.3623.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig117507.3623.1 vs. uniprot
Match: A0A7X5WNX3_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WNX3_9ACTN) HSP 1 Score: 88.6 bits (218), Expect = 2.000e-21 Identity = 40/63 (63.49%), Postives = 44/63 (69.84%), Query Frame = 1
Query: 25 VLCTDPARAEEWDEWYDAQHLPDMMAAEGFVAGTRWTRAEPRVGTANHLTIYEIAGLSVEEAI 213
+LC DP R EWD WYDAQHLPDM+A FVAG+RW R ANHLTIYEIAG + EAI
Sbjct: 1 MLCADPGREAEWDSWYDAQHLPDMLATGVFVAGSRWHREPREPHGANHLTIYEIAGPDLSEAI 63
BLAST of mRNA_M-pyrifera_M_contig117507.3623.1 vs. uniprot
Match: A0A7V2W1U7_9CHLR (Uncharacterized protein n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A7V2W1U7_9CHLR) HSP 1 Score: 60.1 bits (144), Expect = 6.260e-10 Identity = 26/60 (43.33%), Postives = 37/60 (61.67%), Query Frame = 1
Query: 10 LIVAHVLCTDPARAEEWDEWYDAQHLPDMMAAEGFVAGTRWTRAEPRVGTAN-HLTIYEI 186
L+ A C DPAR EE++EWYD H+PD++A G ++ TRW A G +L +YE+
Sbjct: 5 LLFAFSDCKDPAREEEFNEWYDNVHIPDILAVPGMISATRWESAHSVEGQRRKYLALYEL 64
BLAST of mRNA_M-pyrifera_M_contig117507.3623.1 vs. uniprot
Match: A0A846Q5U4_9ARCH (Uncharacterized protein n=1 Tax=Nitrososphaeria archaeon TaxID=2268198 RepID=A0A846Q5U4_9ARCH) HSP 1 Score: 57.4 bits (137), Expect = 6.920e-9 Identity = 23/69 (33.33%), Postives = 38/69 (55.07%), Query Frame = 1
Query: 10 LIVAHVLCTDPARAEEWDEWYDAQHLPDMMAAE-GFVAGTRWTRAEPRVGTANHLTIYEIAGLSVEEAI 213
L + H C P R +E++EWYD H+PD++A F+ R+ + P G ++ IYEI +++ I
Sbjct: 5 LYIVHTNCKYPERVDEFNEWYDKIHIPDILAGSPDFIRAMRFEKRSPAEGEGKYIAIYEIESEDIDQTI 73
BLAST of mRNA_M-pyrifera_M_contig117507.3623.1 vs. uniprot
Match: UPI0019343752 (EthD domain-containing protein n=2 Tax=Frankia TaxID=1854 RepID=UPI0019343752) HSP 1 Score: 55.8 bits (133), Expect = 2.230e-8 Identity = 24/76 (31.58%), Postives = 40/76 (52.63%), Query Frame = 1
Query: 1 PTGLIVAHVLCTDPARAEEWDEWYDAQHLPDMMAAEGFVAGTRWTRAEPR-----VGTANHLTIYEIAGLSVEEAI 213
P G+++ H P R +E++ WYD +HLP+M+A GF A R+ + T +L IYE+ ++ A+
Sbjct: 2 PRGIMIVHSSPASPEREDEFNRWYDEEHLPEMLACAGFTAARRYRLRDAGPIKAPASTPGYLAIYEVEADDLDAAM 77
BLAST of mRNA_M-pyrifera_M_contig117507.3623.1 vs. uniprot
Match: A0A847EIJ1_9CHLR (Uncharacterized protein n=1 Tax=Dehalococcoidales bacterium TaxID=2026733 RepID=A0A847EIJ1_9CHLR) HSP 1 Score: 55.5 bits (132), Expect = 4.160e-8 Identity = 23/60 (38.33%), Postives = 35/60 (58.33%), Query Frame = 1
Query: 31 CTDPARAEEWDEWYDAQHLPDMMAAEGFVAGTRWTRAEPRV-GTANHLTIYEIAGLSVEE 207
C DPAR +E+++WY H+PDM+ G + TRW AE + G L++YE ++E
Sbjct: 12 CKDPAREDEYNDWYSNTHIPDMIEVPGMIRATRWEAAEEKENGIRKFLSLYEFETDDLDE 71
BLAST of mRNA_M-pyrifera_M_contig117507.3623.1 vs. uniprot
Match: A0A536YVZ7_9PROT (Uncharacterized protein n=3 Tax=Bacteria TaxID=2 RepID=A0A536YVZ7_9PROT) HSP 1 Score: 55.8 bits (133), Expect = 1.390e-7 Identity = 24/55 (43.64%), Postives = 36/55 (65.45%), Query Frame = 1
Query: 37 DPARAEEWDEWYDAQHLPDMMAAEGFVAGTRWTRAEPRVGTANHLTIYEIAGLSV 201
+PA A E DEW+ +HLP+ +A +GF+ G+RW E G +L +YE+A L+V
Sbjct: 14 EPAAAVEHDEWHTREHLPERLAIDGFLRGSRWRALE---GLPRYLVVYEVAELAV 65
BLAST of mRNA_M-pyrifera_M_contig117507.3623.1 vs. uniprot
Match: UPI0013B73C5F (hypothetical protein n=1 Tax=Gordonia hankookensis TaxID=589403 RepID=UPI0013B73C5F) HSP 1 Score: 52.4 bits (124), Expect = 4.730e-7 Identity = 23/70 (32.86%), Postives = 41/70 (58.57%), Query Frame = 1
Query: 1 PTGLIVAHVLCTDPARAEEWDEWYDAQHLPDMMAAEGFVAGTRWTRAEPRVGTANHLTIYEIAGLSVEEA 210
P G+++ + P RAEE+ +WYD H+P+++ +GFV+G R P +++YEI G +++A
Sbjct: 2 PKGILMVEGRPSSPDRAEEFGQWYDEVHMPEVLKLDGFVSGRR---LRPIDDDGTLVSLYEIDGSDLKDA 68
BLAST of mRNA_M-pyrifera_M_contig117507.3623.1 vs. uniprot
Match: A0A365H0T5_9ACTN (Uncharacterized protein n=1 Tax=Actinomadura craniellae TaxID=2231787 RepID=A0A365H0T5_9ACTN) HSP 1 Score: 52.4 bits (124), Expect = 4.930e-7 Identity = 25/61 (40.98%), Postives = 36/61 (59.02%), Query Frame = 1
Query: 7 GLIVAHVLCTDPARAEEWDEWYDAQHLPDMMAAEGFVAGTRW-TRAEPRVGTANHLTIYEI 186
GL+V +PAR +E+++WYD HLP ++A GFVA R+ R+ +L IYEI
Sbjct: 4 GLMVVQSGPIEPAREDEYNDWYDNTHLPQVLAVPGFVAARRYRARSGADPALPGYLAIYEI 64
BLAST of mRNA_M-pyrifera_M_contig117507.3623.1 vs. uniprot
Match: X0T8A9_9ZZZZ (Uncharacterized protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X0T8A9_9ZZZZ) HSP 1 Score: 52.4 bits (124), Expect = 5.040e-7 Identity = 21/61 (34.43%), Postives = 33/61 (54.10%), Query Frame = 1
Query: 7 GLIVAHVLCTDPARAEEWDEWYDAQHLPDMMAAEGFVAGTRWTR-AEPRVGTANHLTIYEI 186
++ C DP R E++EWYD H+PD++ GF + TR+ +P G L +YE+
Sbjct: 4 ATVLVFTNCADPTRENEFNEWYDNTHVPDVLETPGFKSCTRYELIGDPGPGQGKFLAVYEV 64
BLAST of mRNA_M-pyrifera_M_contig117507.3623.1 vs. uniprot
Match: A0A1V2I218_9ACTN (Uncharacterized protein n=1 Tax=Frankia asymbiotica TaxID=1834516 RepID=A0A1V2I218_9ACTN) HSP 1 Score: 50.8 bits (120), Expect = 2.370e-6 Identity = 23/75 (30.67%), Postives = 38/75 (50.67%), Query Frame = 1
Query: 7 GLIVAHVLCTDPARAEEWDEWYDAQHLPDMMAAEGFVAGTRW-----TRAEPRVGTANHLTIYEIAGLSVEEAIE 216
G+++ P +E++ WYD HLPD++ GFVA R+ +R G +L IYEI ++ A++
Sbjct: 4 GIMLVQASPASPELEDEFNRWYDEDHLPDLLTTPGFVAARRFRLREGSRGPAADGAPRYLAIYEIEADDLDAALQ 78 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117507.3623.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig117507.3623.1 >prot_M-pyrifera_M_contig117507.3623.1 ID=prot_M-pyrifera_M_contig117507.3623.1|Name=mRNA_M-pyrifera_M_contig117507.3623.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=72bp PTGLIVAHVLCTDPARAEEWDEWYDAQHLPDMMAAEGFVAGTRWTRAEPRback to top mRNA from alignment at M-pyrifera_M_contig117507:122..337+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig117507.3623.1 ID=mRNA_M-pyrifera_M_contig117507.3623.1|Name=mRNA_M-pyrifera_M_contig117507.3623.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=216bp|location=Sequence derived from alignment at M-pyrifera_M_contig117507:122..337+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig117507:122..337+ >mRNA_M-pyrifera_M_contig117507.3623.1 ID=mRNA_M-pyrifera_M_contig117507.3623.1|Name=mRNA_M-pyrifera_M_contig117507.3623.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=432bp|location=Sequence derived from alignment at M-pyrifera_M_contig117507:122..337+ (Macrocystis pyrifera P11B4 male)back to top |