mRNA_M-pyrifera_M_contig11726.3567.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig11726.3567.1 vs. uniprot
Match: A0A0U2S7L5_9EUGL (Cytochrome b n=2 Tax=unclassified Perkinsela TaxID=2639366 RepID=A0A0U2S7L5_9EUGL) HSP 1 Score: 395 bits (1015), Expect = 1.160e-135 Identity = 201/247 (81.38%), Postives = 219/247 (88.66%), Query Frame = 1
Query: 7 LTKLFSVGFNLGICCAIQIALGFMLC*VYSNSLKDSFMIMYLINDNELGSLLRLAHSSMASIIYLLIFTHMFKVMLYGLVFESAH*V*LSGFCIFMVLIVLTFLGYVLPMTQMSFWGLTVFSNILSTIPAIGNLMIYWF*GGEFINEFTLLKVHVLHIVLPMALLGXXXXXXXXXXXXXSSDSIDRFVFYNERLMFMY*FYFRDIHVLLFLCVLLSAGVFLY*SFVFHEESFIIVNTQKTPEKVMPE 747
LTKLFS+GFNLG+CC +QIALGFMLC VYSNS+KDSF IMY INDNELGSLLRLAHS+MASIIY LIFTH+FK M YGLVFESAH V LSGFCIF+ LIVLTFLGYVLPMTQMSFWGLTVFSNILSTIPA+GNLMIYWF GGEFINEFTLLKVHVLHIVLPM LLG SSD+IDRFVFYNER+MFMY FYFRD++++LF+CV+L+ GVF+Y SFVFHEESFIIVNTQKTPEKVMPE
Sbjct: 27 LTKLFSIGFNLGVCCTLQIALGFMLCWVYSNSIKDSFQIMYSINDNELGSLLRLAHSTMASIIYFLIFTHIFKAMFYGLVFESAHWVWLSGFCIFLTLIVLTFLGYVLPMTQMSFWGLTVFSNILSTIPAMGNLMIYWFWGGEFINEFTLLKVHVLHIVLPMGLLGMIVMHMYLLHQYVSSDAIDRFVFYNERIMFMYWFYFRDLNIMLFICVVLNYGVFIYWSFVFHEESFIIVNTQKTPEKVMPE 273
BLAST of mRNA_M-pyrifera_M_contig11726.3567.1 vs. uniprot
Match: A0A077ERL4_9TRYP (Cytochrome b n=6 Tax=Trypanosomatidae TaxID=5654 RepID=A0A077ERL4_9TRYP) HSP 1 Score: 183 bits (465), Expect = 6.090e-54 Identity = 103/238 (43.28%), Postives = 151/238 (63.45%), Query Frame = 1
Query: 37 LGICCAIQIALGFMLC*VYSNSLKDSFMIMYLINDNELGSLLRLAHSSMASIIYLLIFTHMFKVMLYGLVFESAH*V*LSGFCIFMVLIVLTFLGYVLPMTQMSFWGLTVFSNILSTIPAIGNLMIYWF*GGEFINEFTLLKVHVLHIVLPMALLGXXXXXXXXXXXXXSSDSI-DRFVFYNERLMFMY*FYFRDIHVLLFLCVLLSAGVFLY*SFVFHEESFIIVNTQKTPEKVMPE 747
L I C + +A F C + +N + +++L D +LG ++R AH S++Y L++ H+FKV++ ++F++ V GF IF+ LIV+ F+GY LP T MS+WGLTVFSNIL+T+P IG + YW G EFIN+FTL+K+HVLH++LP L+ SSD DRF FY ERL+F FY RD+ + F+ + +F+ FVFHEES++IV+T KT +K++PE
Sbjct: 3 LQIVCGVCLAWLFFSCFICTNW----YFVLFLW-DFDLGFVIRSAHIVFTSLLYFLLYVHIFKVIVLIILFDTHILVWAVGFVIFIFLIVIAFIGYTLPCTMMSYWGLTVFSNILATVPVIGTWLCYWIWGSEFINDFTLVKLHVLHVLLPFVLILVLFMHLFCLHYFMSSDGFCDRFAFYAERLVFCMWFYLRDMFLAFFILFCVMYFIFINWYFVFHEESWVIVDTLKTSDKILPE 235
BLAST of mRNA_M-pyrifera_M_contig11726.3567.1 vs. uniprot
Match: CYB_TRYBO (Cytochrome b n=1 Tax=Trypanoplasma borreli TaxID=5710 RepID=CYB_TRYBO) HSP 1 Score: 176 bits (447), Expect = 6.830e-50 Identity = 102/250 (40.80%), Postives = 153/250 (61.20%), Query Frame = 1
Query: 7 LTKLFSVGFNLGICCAIQIALGFMLC*VYSNSL-KDSFMIMYLIN-DNELGSLLRLAHSSMASIIYLLIFTHMFKVMLYGLVFESAH*V*LSGFCIFMVLIVLTFLGYVLPMTQMSFWGLTVFSNILSTIPAIGNLMIYWF*GGEFINEFTLLKVHVLHIVLPMALLGXXXXXXXXXXXXXSSDSI-DRFVFYNERLMFMY*FYFRDIHVLLFLCVLLSAGVFLY*SFVFHEESFIIVNTQKTPEKVMPE 747
L +++ +GFNLG+ A+QI +G L + + +++ LI+ + +LG ++R H S++Y L++ H+ KV+ L+F+S+ V GF IF+ ++++ F+GY LP T MS+WGLTVFSNIL+TIP IG + W EFIN+FTLLK+H +HI LP LL SSD + DRF FY ER F RD+ +++ + L + +Y FVFHEES+IIV+T KT +K++PE
Sbjct: 26 LFRVYGLGFNLGVMIALQILVGICLSWFFFRCIIPQNWIFTLLIHLEFDLGFIIRSLHIIFTSLLYFLLYIHIIKVIFLCLIFDSSMLVWFFGFLIFIFILIIAFIGYTLPCTSMSYWGLTVFSNILATIPLIGIYICQWIWCSEFINDFTLLKLHSIHIFLPFVLLFLIGAHFFVLHYFLSSDGLLDRFPFYYERFFFFLLXXLRDLFLIINILCFLIYYICIYWFFVFHEESWIIVDTLKTSDKILPE 275
BLAST of mRNA_M-pyrifera_M_contig11726.3567.1 vs. uniprot
Match: CYB_LEITA (Cytochrome b n=122 Tax=Trypanosomatidae TaxID=5654 RepID=CYB_LEITA) HSP 1 Score: 172 bits (435), Expect = 4.040e-48 Identity = 98/249 (39.36%), Postives = 149/249 (59.84%), Query Frame = 1
Query: 7 LTKLFSVGFNLGICCAIQIALGFMLC*VY-SNSLKDSFMIMYLINDNELGSLLRLAHSSMASIIYLLIFTHMFKVMLYGLVFESAH*V*LSGFCIFMVLIVLTFLGYVLPMTQMSFWGLTVFSNILSTIPAIGNLMIYWF*GGEFINEFTLLKVHVLHIVLPMALLGXXXXXXXXXXXXXSSDSI-DRFVFYNERLMFMY*FYFRDIHVLLFLCVLLSAGVFLY*SFVFHEESFIIVNTQKTPEKVMPE 747
L +++ VGF+LG +QI G L ++ S + ++ + + D +LG ++R H S+++ L++ H+FK ++ ++F++ V GF I++ GYVLP T MS+WGLTVFSNIL+T+P IG + YW G E+IN+FTLLK+HVLH++LP L+ SSD DRF FY ERL F FY RD+ + + + +F+ FVFHEES++IV+T KT +K++PE
Sbjct: 26 LLRVYGVGFSLGFFICMQIICGVCLAWLFFSCFICTNWYFVLFLWDFDLGFVIRSTHICFTSLLFFLLYVHIFKCIVLIILFDTHILVWAVGFIIYIFXXXXXXXGYVLPCTMMSYWGLTVFSNILATVPVIGTWLCYWIWGSEYINDFTLLKLHVLHVLLPFVLILVIFMHLFCLHYFMSSDGFCDRFAFYCERLCFCMWFYLRDMFLAFLILFYVVYFIFINWYFVFHEESWVIVDTLKTSDKILPE 274
BLAST of mRNA_M-pyrifera_M_contig11726.3567.1 vs. uniprot
Match: A0A120H2G7_9TRYP (Cytochrome b (Fragment) n=3 Tax=Trypanosomatidae TaxID=5654 RepID=A0A120H2G7_9TRYP) HSP 1 Score: 149 bits (376), Expect = 1.650e-41 Identity = 76/155 (49.03%), Postives = 104/155 (67.10%), Query Frame = 1
Query: 286 IFMVLIVLTFLGYVLPMTQMSFWGLTVFSNILSTIPAIGNLMIYWF*GGEFINEFTLLKVHVLHIVLPMALLGXXXXXXXXXXXXXSSDSI-DRFVFYNERLMFMY*FYFRDIHVLLFLCVLLSAGVFLY*SFVFHEESFIIVNTQKTPEKVMPE 747
I++ ++++ F+GYVLP T MS+WGLTVFSNIL+T+P IG + YW G EFIN+FTLLK+HVLH++LP L+ SSD+ DRF FY ERL F FY RD+ + + + VF+ FVFHEES++IV+T KT +K++PE
Sbjct: 2 IYIFIVIIGFIGYVLPCTMMSYWGLTVFSNILATVPVIGTWLCYWIWGSEFINDFTLLKLHVLHVLLPFVLILVIFLHLFCLHYFMSSDAFCDRFAFYCERLCFCMWFYLRDMFLAFMILFCVMYFVFINWYFVFHEESWVIVDTLKTSDKILPE 156
BLAST of mRNA_M-pyrifera_M_contig11726.3567.1 vs. uniprot
Match: A0A2Z2CNG4_LEIMA (Cytochrome b (Fragment) n=321 Tax=Leishmaniinae TaxID=1286322 RepID=A0A2Z2CNG4_LEIMA) HSP 1 Score: 151 bits (382), Expect = 3.980e-41 Identity = 91/244 (37.30%), Postives = 138/244 (56.56%), Query Frame = 1
Query: 22 SVGFNLGICCAIQIALGFMLC*VY-SNSLKDSFMIMYLINDNELGSLLRLAHSSMASIIYLLIFTHMFKVMLYGLVFESAH*V*LSGFCIFMVLIVLTFLGYVLPMTQMSFWGLTVFSNILSTIPAIGNLMIYWF*GGEFINEFTLLKVHVLHIVLPMALLGXXXXXXXXXXXXXSSDSI-DRFVFYNERLMFMY*FYFRDIHVLLFLCVLLSAGVFLY*SFVFHEESFIIVNTQKTPEKVMPE 747
VGF+LG +QI G L ++ S + ++ + ++ +LG ++R H S+++ L++ H+FK ++ ++F++ V VLP T MS+WGLTVFSNIL+T+P IG + YW G E+IN+FTLLK+HVLH++LP L+ SSD DRF FY ERL F FY RD+ + + + +F+ FVFHEES++IV+T KT +K++PE
Sbjct: 1 GVGFSLGFFICMQIICGVCLAWLFFSCFICTNWYYVLVLWRFDLGFVIRSTHICFTSLLFFLLYVHIFKCIVLIILFDTHILVWXXXXXXXXXXXXXXXXXXVLPCTMMSYWGLTVFSNILATVPVIGTWLCYWIWGSEYINDFTLLKLHVLHVLLPFVLILVIFMHLFCLHYFMSSDGFCDRFAFYCERLCFCMWFYLRDMFLAFLILFFVIYFIFINWYFVFHEESWVIVDTLKTSDKILPE 244
BLAST of mRNA_M-pyrifera_M_contig11726.3567.1 vs. uniprot
Match: A0A173M8D5_LEIGU (Cytochrome b (Fragment) n=4 Tax=Viannia TaxID=37616 RepID=A0A173M8D5_LEIGU) HSP 1 Score: 147 bits (371), Expect = 3.710e-40 Identity = 89/234 (38.03%), Postives = 132/234 (56.41%), Query Frame = 1
Query: 49 CAIQIALGFMLC*VYSNSLKDSFMIMYLINDNELGSLLRLAHSSMASIIYLLIFTHMFKVMLYGLVFESAH*V*LSGFCIFMVLIVLTFLGYVLPMTQMSFWGLTVFSNILSTIPAIGNLMIYWF*GGEFINEFTLLKVHVLHIVLPMALLGXXXXXXXXXXXXXSSDSI-DRFVFYNERLMFMY*FYFRDIHVLLFLCVLLSAGVFLY*SFVFHEESFIIVNTQKTPEKVMPE 747
C + +A F C + +N + +++L D +LG ++R H S+++ L++ H+FK ++ ++F++ V VLP T MS+WGLTVFSNIL+T+P IG + YW G E+IN+FTLLK+HVLH++LP LL SSD DRF FY ERL F FY RD+ + + + +F+ FVFHEES +IV+T KT +K++PE
Sbjct: 1 CGVCLAWLFFSCFICTNW----YFVLFLW-DFDLGFVIRSTHICFTSLLFFLLYVHIFKCIVLIILFDTHILVWXXXXXXXXXXXXXXXXXXVLPCTMMSYWGLTVFSNILATVPVIGVWLCYWIWGSEYINDFTLLKLHVLHVLLPFILLIIIFMHLFCLHYFMSSDGFCDRFAFYCERLCFCMWFYLRDMFLAFLILFFIVYFIFINWYFVFHEESCVIVDTLKTSDKILPE 229
BLAST of mRNA_M-pyrifera_M_contig11726.3567.1 vs. uniprot
Match: CYB_TRYBB (Cytochrome b n=7 Tax=Trypanosoma TaxID=5690 RepID=CYB_TRYBB) HSP 1 Score: 142 bits (359), Expect = 5.640e-37 Identity = 90/249 (36.14%), Postives = 133/249 (53.41%), Query Frame = 1
Query: 7 LTKLFSVGFNLGICCAIQIALGFMLC*VY-SNSLKDSFMIMYLINDNELGSLLRLAHSSMASIIYLLIFTHMFKVMLYGLVFESAH*V*LSGFCIFMVLIVLTFLGYVLPMTQMSFWGLTVFSNILSTIPAIGNLMIYWF*GGEFINEFTLLKVHVLHIVLPMALLGXXXXXXXXXXXXXSSDSI-DRFVFYNERLMFMY*FYFRDIHVLLFLCVLLSAGVFLY*SFVFHEESFIIVNTQKTPEKVMPE 747
L +++ VGF+LG A+QI G L ++ S + ++ + + D +LG ++R H S++YLL++ LP T MS+WGLTVFSNI++T+P +G + YW G EFIN+FTLLK+HVLH++LP LL SSD+ DRF FY ERL F FY RD+ + + + + +F+ FVFHEES++IV+T KT +K++PE
Sbjct: 18 LYRIYGVGFSLGFFIALQIICGVCLAWLFFSCFICSNWYFVLFLWDFDLGFVIRSVHICFTSLLYLLLYIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPCTMMSYWGLTVFSNIIATVPILGIWLCYWIWGSEFINDFTLLKLHVLHVLLPFILLIILILHLFCLHYFMSSDAFCDRFAFYCERLSFCMWFYLRDMFLAFSILLCMMYVIFINWYFVFHEESWVIVDTLKTSDKILPE 266
BLAST of mRNA_M-pyrifera_M_contig11726.3567.1 vs. uniprot
Match: A0A3G3MCM2_BODSA (Cytochrome b n=1 Tax=Bodo saltans TaxID=75058 RepID=A0A3G3MCM2_BODSA) HSP 1 Score: 141 bits (356), Expect = 8.060e-37 Identity = 91/233 (39.06%), Postives = 124/233 (53.22%), Query Frame = 1
Query: 55 IQIALGFML-C*VYSNSLKDSFMIMYLINDNELGSLLRLAHSSMASIIYLLIFTHMFKVMLYGLVFESAH*V*LSGFCIFMVLIVLTFLGYVLPMTQMSFWGLTVFSNILSTIPAIGNLMIYWF*GGEFINEFTLLKVHVLHIVLPMALLGXXXXXXXXXXXXXSSDSI-DRFVFYNERLMFMY*FYFRDIHVLLFLCVLLSAGVFLY*SFVFHEESFIIVNTQKTPEKVMPE 747
+QI +G L C ++ L ++ + + D +LG ++R H S+IYLLI+ H+FK VLP T MS+WGLTVFSNIL+T+P IG + YW G EFIN+FTLLK+H LHI+LP +L SSD DRF FY ERL+F FY RD + + + S V + FVFHEES++IV+ KT +K++PE
Sbjct: 3 LQILVGICLSCMFFNCYLSLNWYFVLFLWDFDLGFIVRSLHICFTSLIYLLIYIHIFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLPCTMMSYWGLTVFSNILATVPVIGVWLCYWIWGCEFINDFTLLKLHSLHILLPFLMLFVIVLHFFCLHYFMSSDGFCDRFSFYVERLVFFMWFYLRDCFLFFLIIMSFSYFVIINWYFVFHEESWVIVDVLKTSDKILPE 235
BLAST of mRNA_M-pyrifera_M_contig11726.3567.1 vs. uniprot
Match: A0A0E3J9X0_TRYVI (Cytochrome b n=1 Tax=Trypanosoma vivax TaxID=5699 RepID=A0A0E3J9X0_TRYVI) HSP 1 Score: 137 bits (346), Expect = 5.190e-35 Identity = 93/252 (36.90%), Postives = 133/252 (52.78%), Query Frame = 1
Query: 7 LTKLFSVGFNLGICCAIQIALGFMLC*VYSNSL--KDSFMIMYLINDNELGSLLRLAHSSMASIIYLLIFTHMFKVMLYGLVFESAH*V*LSGFCIFMVLIVLTFLGYVLPMTQMSFWGLTVFSNILSTIPAIGNLMIYWF*GGEFINEFTLLKVHVLHIVLPMALLGXXXXXXXXXXXXXSSDSI-DRFVFYNERLMFMY*FYFRDIHV--LLFLCVLLSAGVFLY*SFVFHEESFIIVNTQKTPEKVMPE 747
L +L+ VGF+LG +Q+ G L ++ + + + I++L D +LG ++R H S++Y L++ VLP T MS+WGLTVFSNI++T+P G + YW G EFIN++TLLK+ VLHIVLP L+ SSD+ DRFVFY ERL F FY RD+ + L+ +CVL + Y FVFHEES++IV+ KT +K++PE
Sbjct: 25 LYRLYGVGFSLGFFILLQVICGLFLSWLFFSCFICVNWYFILFLW-DFDLGFIIRSVHICFTSLLYFLLYVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLPCTMMSYWGLTVFSNIIATVPVFGKWLCYWIWGSEFINDYTLLKLQVLHIVLPFMLIFILILHLFCLHYFMSSDAFCDRFVFYCERLCFCLWFYLRDLVLCFLILICVLYCILINWY--FVFHEESWLIVDVLKTSDKILPE 273 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11726.3567.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11726.3567.1 >prot_M-pyrifera_M_contig11726.3567.1 ID=prot_M-pyrifera_M_contig11726.3567.1|Name=mRNA_M-pyrifera_M_contig11726.3567.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=49bp MIMYLINDNELGSLLRLAHSSMASIIYLLIFTHMFKVMLYGLVFESAH*back to top mRNA from alignment at M-pyrifera_M_contig11726:2750..3496+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig11726.3567.1 ID=mRNA_M-pyrifera_M_contig11726.3567.1|Name=mRNA_M-pyrifera_M_contig11726.3567.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=747bp|location=Sequence derived from alignment at M-pyrifera_M_contig11726:2750..3496+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig11726:2750..3496+ >mRNA_M-pyrifera_M_contig11726.3567.1 ID=mRNA_M-pyrifera_M_contig11726.3567.1|Name=mRNA_M-pyrifera_M_contig11726.3567.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=294bp|location=Sequence derived from alignment at M-pyrifera_M_contig11726:2750..3496+ (Macrocystis pyrifera P11B4 male)back to top |