mRNA_M-pyrifera_M_contig117239.3561.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig117239.3561.1 vs. uniprot
Match: A0A7S4HGW8_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HGW8_9EUKA) HSP 1 Score: 162 bits (410), Expect = 1.190e-45 Identity = 72/109 (66.06%), Postives = 90/109 (82.57%), Query Frame = 1
Query: 1 RVLVAYSWRNPRVGYCQSMNIICAVLLLFMAEEEAFWLLAAICERLLPNYYTTPLTGLMTDQHIMEILVAEHIPGLPDHLVSLGIALPIVTMPWFICMFINSMPWELSF 327
RVL AY+ RNP +GYCQSMNI+CAV LLFM+EEE FWLL I E+LLP YY++PL GLMTDQHI+++LV E +PGL DHL LGI L I+TMPWF+C+FIN +PW++ +
Sbjct: 261 RVLCAYALRNPDIGYCQSMNIVCAVFLLFMSEEEVFWLLTVIAEKLLPEYYSSPLVGLMTDQHIVQLLVEETLPGLVDHLQYLGITLSILTMPWFLCLFINFLPWDVRY 369
BLAST of mRNA_M-pyrifera_M_contig117239.3561.1 vs. uniprot
Match: L8GY97_ACACA (TBC domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GY97_ACACA) HSP 1 Score: 166 bits (419), Expect = 2.280e-44 Identity = 80/161 (49.69%), Postives = 109/161 (67.70%), Query Frame = 1
Query: 4 VLVAYSWRNPRVGYCQSMNIICAVLLLFMAEEEAFWLLAAICERLLPNYYTTPLTGLMTDQHIMEILVAEHIPGLPDHLVSLGIALPIVTMPWFICMFINSMPWELSFRVMDMLLLEG--AAVLFRVSLALLDINAALIFRFDDGIEMFNLLK--KIDCDT 474
VL+AYSWRNP +GYCQSMNIIC++LLLFM EEE FW L +CE L P Y+T + G MTDQH++E LVAEH P L HL S+ + L +++ PWF+C+FI +P + S R++D+L EG + +F+V+LA+ N I D ++ LK +DCDT
Sbjct: 297 VLIAYSWRNPSLGYCQSMNIICSLLLLFMGEEETFWALTILCEELFPQYFTPDMLGSMTDQHVLEDLVAEHFPKLNAHLESIQLPLVLISFPWFMCLFIGYIPMQTSIRILDILFCEGYDSTFMFKVALAVFKFNQKFILNTKDFSKLVIQLKFTNLDCDT 457
BLAST of mRNA_M-pyrifera_M_contig117239.3561.1 vs. uniprot
Match: A0A1A0HJN3_9ASCO (TBC-domain-containing protein n=1 Tax=Metschnikowia bicuspidata var. bicuspidata NRRL YB-4993 TaxID=869754 RepID=A0A1A0HJN3_9ASCO) HSP 1 Score: 161 bits (408), Expect = 6.120e-43 Identity = 73/160 (45.62%), Postives = 111/160 (69.38%), Query Frame = 1
Query: 1 RVLVAYSWRNPRVGYCQSMNIICAVLLLFMAEEEAFWLLAAICERLLPNYYTTPLTGLMTDQHIMEILVAEHIPGLPDHLVSLGIALPIVTMPWFICMFINSMPWELSFRVMDMLLLEGAAVLFRVSLALLDINAALIFRFDDGIEMFNLLKKIDCDTDQ 480
RVLVAYSW+NP +GYCQ+MNI+ A LL++M+EE+AFW L+ ICER++P YY+ + G + DQ + E LV E IP L H++ I L ++++PWF+C+++ SMP +FR++D+ L+G LF+V+LA+L IN + + +D F +LK+ DQ
Sbjct: 307 RVLVAYSWKNPEIGYCQAMNIVAAALLIYMSEEQAFWCLSTICERIVPGYYSKTMYGTLLDQRVFESLVEEKIPILWSHMLKYDIQLSVISLPWFLCLYLTSMPLIFAFRILDVFFLQGPKTLFQVALAILKINGEELLQAEDDGAFFLILKEYFNTLDQ 466
BLAST of mRNA_M-pyrifera_M_contig117239.3561.1 vs. uniprot
Match: A0A512UIB4_9ASCO (Rab-GAP TBC domain-containing protein n=1 Tax=Metschnikowia sp. JCM 33374 TaxID=2562755 RepID=A0A512UIB4_9ASCO) HSP 1 Score: 160 bits (406), Expect = 1.150e-42 Identity = 72/160 (45.00%), Postives = 111/160 (69.38%), Query Frame = 1
Query: 1 RVLVAYSWRNPRVGYCQSMNIICAVLLLFMAEEEAFWLLAAICERLLPNYYTTPLTGLMTDQHIMEILVAEHIPGLPDHLVSLGIALPIVTMPWFICMFINSMPWELSFRVMDMLLLEGAAVLFRVSLALLDINAALIFRFDDGIEMFNLLKKIDCDTDQ 480
RVL AYSW+NP +GYCQ+MNI+ A LL++M+EE+AFW L++ICER++P YY+ + G + DQ + E LV + IP L HL+ I L ++++PWF+C+++ SMP +FR++D+ L+G LF+V+LA+L IN + +D F++LK+ DQ
Sbjct: 307 RVLEAYSWKNPEIGYCQAMNIVAAALLIYMSEEQAFWCLSSICERIVPGYYSKTMYGTLLDQRVFESLVEDKIPMLWGHLLKHDIQLSVISLPWFLCLYLTSMPLVFAFRILDVFFLQGPKTLFQVALAILKINGEALLEAEDDGTFFSILKEYFNTLDQ 466
BLAST of mRNA_M-pyrifera_M_contig117239.3561.1 vs. uniprot
Match: A0A2P6N8C9_9EUKA (Rab-GAP TBC domain-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N8C9_9EUKA) HSP 1 Score: 160 bits (406), Expect = 1.270e-42 Identity = 74/165 (44.85%), Postives = 112/165 (67.88%), Query Frame = 1
Query: 1 RVLVAYSWRNPRVGYCQSMNIICAVLLLFMAEEEAFWLLAAICERLLPNYYTTPLTGLMTDQHIMEILVAEHIPGLPDHLVSLGIALPIVTMPWFICMFINSMPWELSFRVMDMLLLEGAAVLFRVSLALLDINAALIFRFDDGIEMFNLLKKIDCDTDQVMALA 495
RVL+ YSWRN +GYCQSMNI+ A +LLFM+EEEAFWL ++ICE LL +YY T + G M DQ + E+LV ++P + HL +GI + +++ PWF+C++IN +P ELS R++D EG V F+ LA + I + ++G + +L+K+ D D D++ ++A
Sbjct: 1086 RVLLGYSWRNQAIGYCQSMNIVVASILLFMSEEEAFWLTSSICEELLSDYYVTSMIGSMADQRVFEVLVQTYLPQIHKHLGRVGIPIQLISFPWFMCIYINCLPLELSNRILDCFFYEGREVFFKFGLAWFKMREEEILKEEEGKTIVDLMKQKDIDGDKLFSIA 1250
BLAST of mRNA_M-pyrifera_M_contig117239.3561.1 vs. uniprot
Match: A0A8H7GTI7_9ASCO (Rab-GAP TBC domain-containing protein n=2 Tax=Metschnikowia TaxID=27320 RepID=A0A8H7GTI7_9ASCO) HSP 1 Score: 160 bits (404), Expect = 2.140e-42 Identity = 71/152 (46.71%), Postives = 107/152 (70.39%), Query Frame = 1
Query: 1 RVLVAYSWRNPRVGYCQSMNIICAVLLLFMAEEEAFWLLAAICERLLPNYYTTPLTGLMTDQHIMEILVAEHIPGLPDHLVSLGIALPIVTMPWFICMFINSMPWELSFRVMDMLLLEGAAVLFRVSLALLDINAALIFRFDDGIEMFNLLK 456
RVLVAYSW+NP +GYCQ+MNI+ A LL++M+EE+AFW L+ ICER++P YY+ + G + DQ + E LV E IP L HL+ I L ++++PWF+C+++ SMP +FR++D+ L+G LF+V+LA+L +N + +D F +LK
Sbjct: 307 RVLVAYSWKNPEIGYCQAMNIVAAALLIYMSEEQAFWCLSTICERIVPGYYSKTMYGTLLDQRVFESLVEEKIPMLWSHLLKHDIQLSVISLPWFLCLYLTSMPLVFAFRILDVFFLQGPKTLFQVALAILKLNGEELLEAEDDGAFFLILK 458
BLAST of mRNA_M-pyrifera_M_contig117239.3561.1 vs. uniprot
Match: L8HHS3_ACACA (TBC domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HHS3_ACACA) HSP 1 Score: 158 bits (399), Expect = 1.120e-41 Identity = 78/163 (47.85%), Postives = 108/163 (66.26%), Query Frame = 1
Query: 4 VLVAYSWRNPRVGYCQSMNIICAVLLLFMAEEEAFWLLAAICERLLPNYYTTPLTGLMTDQHIMEILVAEHIPGLPDHLVSLGIALPIVTMPWFICMFINSMPWELSFRVMDMLLLEGAA--VLFRVSLALLDINAALIFRFDDGIEMFNLLKKIDCDTDQVM 486
VL YSWRNP +GYCQSMNIICAVLLLFM+EEEAFWLLA +CE LLP Y+T + G +TDQ + E LVAEH+P + +H L + L +++ PW +C+FI +P + + VMD+L EG A LF+V L++L ++ I D + LK D ++++
Sbjct: 812 VLSVYSWRNPDLGYCQSMNIICAVLLLFMSEEEAFWLLANVCEELLPQYFTRDMLGSITDQRVFEDLVAEHVPQVAEHFERLELQLALISFPWLLCLFIGHVPLQATLHVMDVLFCEGPASTYLFKVGLSVLQLHHDWILEQTDCARIIAALKWASIDPEELV 974
BLAST of mRNA_M-pyrifera_M_contig117239.3561.1 vs. uniprot
Match: M5E9T0_MALS4 (Rab-GAP TBC domain-containing protein n=2 Tax=Malassezia sympodialis (strain ATCC 42132) TaxID=1230383 RepID=M5E9T0_MALS4) HSP 1 Score: 156 bits (395), Expect = 2.200e-41 Identity = 74/152 (48.68%), Postives = 103/152 (67.76%), Query Frame = 1
Query: 1 RVLVAYSWRNPRVGYCQSMNIICAVLLLFMAEEEAFWLLAAICERLLPNYYTTPLTGLMTDQHIMEILVAEHIPGLPDHLVSLGIALPIVTMPWFICMFINSMPWELSFRVMDMLLLEGAAVLFRVSLALLDINAALIFRFDDGIEMFNLLK 456
RVLVAYSWRNP +GYCQ+MNI+ A LL++M+EE+ FWLL +C+RLLP YYT + G + DQ + E LV + +P L +H V + L +VT+PW + +FINSMP +FR++D + G+ VLF+V LA+L IN I D M +L+
Sbjct: 314 RVLVAYSWRNPELGYCQAMNIVVAALLIYMSEEQCFWLLDMLCDRLLPGYYTQSMAGTLLDQKVFENLVQQTMPMLHEHFVKNDMQLSLVTLPWLLSLFINSMPMVFAFRIIDCFMAFGSQVLFQVGLAILKINGEAILSVSDDGTMIGMLR 465
BLAST of mRNA_M-pyrifera_M_contig117239.3561.1 vs. uniprot
Match: A0A1Y3NKC5_PIRSE (Rab-GAP TBC domain-containing protein (Fragment) n=1 Tax=Piromyces sp. (strain E2) TaxID=73868 RepID=A0A1Y3NKC5_PIRSE) HSP 1 Score: 155 bits (393), Expect = 2.210e-41 Identity = 75/163 (46.01%), Postives = 106/163 (65.03%), Query Frame = 1
Query: 1 RVLVAYSWRNPRVGYCQSMNIICAVLLLFMAEEEAFWLLAAICERLLPNYYTTPLTGLMTDQHIMEILVAEHIPGLPDHLVSLGIALPIVTMPWFICMFINSMPWELSFRVMDMLLLEGAAVLFRVSLALLDINAALIFRFDDGIEMFNLLKKIDCDT-DQVM 486
RVL AYS+ NP +GYCQ+MNI+ +VLL+FM EE+ FWLL +C+RLLP YY+ + G++ D + E LV +++P + +H I L IV +PWF+ +FINS P L+FRV+D L+G VLF++ L +L NA + R D E+ N+ K DQVM
Sbjct: 250 RVLYAYSFHNPELGYCQAMNIVASVLLIFMTEEQVFWLLTVLCDRLLPGYYSVNMVGVIIDNQVFESLVLKYMPAISEHFKKYDIQLSIVCLPWFLSLFINSFPLSLAFRVLDCFFLQGPPVLFQLGLGILKANAEKLLRAKDDGEVMNIFKNYFATAEDQVM 412
BLAST of mRNA_M-pyrifera_M_contig117239.3561.1 vs. uniprot
Match: A0A060SYI6_BLAAD (ARAD1A12650p n=1 Tax=Blastobotrys adeninivorans TaxID=409370 RepID=A0A060SYI6_BLAAD) HSP 1 Score: 157 bits (396), Expect = 2.500e-41 Identity = 75/145 (51.72%), Postives = 107/145 (73.79%), Query Frame = 1
Query: 1 RVLVAYSWRNPRVGYCQSMNIICAVLLLFMAEEEAFWLLAAICERLLPNYYTTPLTGLMTDQHIMEILVAEHIPGLPDHLVSLGIALPIVTMPWFICMFINSMPWELSFRVMDMLLLEGAAVLFRVSLALLDINA-ALIFRFDDG 432
RVL YSW+NP+VGYCQ+MNI+ A LL++M+EE+AFW L A+C+RLLP YY+ + G + DQ ++E LV + +P L +HL I L +V++PWF+ +FINSMP +FR+MD+ +EG+ LF+V+LA+L IN AL+ DDG
Sbjct: 321 RVLTVYSWKNPKVGYCQAMNIVVAALLIYMSEEQAFWCLGALCDRLLPGYYSKTMYGTLLDQKVLESLVEKTMPILWEHLSKHDIQLSVVSLPWFLSIFINSMPLIFAFRIMDVFFMEGSKTLFQVALAILRINGEALLDAEDDG 465 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117239.3561.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig117239.3561.1 >prot_M-pyrifera_M_contig117239.3561.1 ID=prot_M-pyrifera_M_contig117239.3561.1|Name=mRNA_M-pyrifera_M_contig117239.3561.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=165bp RVLVAYSWRNPRVGYCQSMNIICAVLLLFMAEEEAFWLLAAICERLLPNYback to top mRNA from alignment at M-pyrifera_M_contig117239:4..555- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig117239.3561.1 ID=mRNA_M-pyrifera_M_contig117239.3561.1|Name=mRNA_M-pyrifera_M_contig117239.3561.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=552bp|location=Sequence derived from alignment at M-pyrifera_M_contig117239:4..555- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig117239:4..555- >mRNA_M-pyrifera_M_contig117239.3561.1 ID=mRNA_M-pyrifera_M_contig117239.3561.1|Name=mRNA_M-pyrifera_M_contig117239.3561.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=990bp|location=Sequence derived from alignment at M-pyrifera_M_contig117239:4..555- (Macrocystis pyrifera P11B4 male)back to top |