mRNA_M-pyrifera_M_contig11695.3507.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig11695.3507.1 vs. uniprot
Match: D7G861_ECTSI (ADP-ribosylation factor GTPase-activating protein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G861_ECTSI) HSP 1 Score: 177 bits (449), Expect = 2.440e-49 Identity = 83/88 (94.32%), Postives = 85/88 (96.59%), Query Frame = 1
Query: 73 MDCGQPETSWGGPTYGILLCVKCAGRHRSLGTHLTVIKSLTMDRWDAGQVKRMELGGNGQLRAWFQKCQTENSALEMKYRTKAATLYR 336
MDCG PETSWGGPTYGILLCVKCAGRHRSLGTHLTVIKSL MDRWDAGQV+RMELGGNGQL+AWF KCQTENSALEMKYRTKAATLYR
Sbjct: 1 MDCGAPETSWGGPTYGILLCVKCAGRHRSLGTHLTVIKSLAMDRWDAGQVRRMELGGNGQLQAWFTKCQTENSALEMKYRTKAATLYR 88
BLAST of mRNA_M-pyrifera_M_contig11695.3507.1 vs. uniprot
Match: A0A7R9U3N9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3N9_9STRA) HSP 1 Score: 110 bits (274), Expect = 8.810e-27 Identity = 50/98 (51.02%), Postives = 66/98 (67.35%), Query Frame = 1
Query: 43 VQKLEGNSACMDCGQPETSWGGPTYGILLCVKCAGRHRSLGTHLTVIKSLTMDRWDAGQVKRMELGGNGQLRAWFQKCQTENSALEMKYRTKAATLYR 336
V++L+GN C+DCG +TSW + G L+C++CAGRHRSLG H++ +++LTMD W A Q KRM LGGN LR++ Q E LE KY T A YR
Sbjct: 2 VKRLKGNERCVDCGAADTSWASVSMGSLICLQCAGRHRSLGVHVSFVRNLTMDNWTAAQAKRMHLGGNALLRSFLTTHQLETLPLESKYTTPQAKFYR 99
BLAST of mRNA_M-pyrifera_M_contig11695.3507.1 vs. uniprot
Match: W7TG24_9STRA (Adp-ribosylation factor gtpase-activating n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TG24_9STRA) HSP 1 Score: 104 bits (259), Expect = 1.670e-26 Identity = 45/108 (41.67%), Postives = 72/108 (66.67%), Query Frame = 1
Query: 13 GPFPRAALKRVQKLEGNSACMDCGQPETSWGGPTYGILLCVKCAGRHRSLGTHLTVIKSLTMDRWDAGQVKRMELGGNGQLRAWFQKCQTENSALEMKYRTKAATLYR 336
GPFP L ++ GN+ C DCG +T W TYGIL+C++C+G HRSLG ++ ++SL++D W QV M LG N Q++ +F++ + N+ + ++Y++KAA +YR
Sbjct: 11 GPFPPDILLEIKNSPGNNQCCDCGSFDTEWASVTYGILICLRCSGFHRSLGVSVSFVRSLSLDSWTPKQVFAMRLGSNFQMQEFFRRQRISNTDIRVRYQSKAAGVYR 118
BLAST of mRNA_M-pyrifera_M_contig11695.3507.1 vs. uniprot
Match: K8ZBQ6_NANGC (Arf-GAP domain-containing protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8ZBQ6_NANGC) HSP 1 Score: 104 bits (259), Expect = 4.240e-26 Identity = 45/108 (41.67%), Postives = 72/108 (66.67%), Query Frame = 1
Query: 13 GPFPRAALKRVQKLEGNSACMDCGQPETSWGGPTYGILLCVKCAGRHRSLGTHLTVIKSLTMDRWDAGQVKRMELGGNGQLRAWFQKCQTENSALEMKYRTKAATLYR 336
GPFP L ++ GN+ C DCG +T W TYGIL+C++C+G HRSLG ++ ++SL++D W QV M LG N Q++ +F++ + N+ + ++Y++KAA +YR
Sbjct: 11 GPFPPDILLEIKNSPGNNQCCDCGSFDTEWASVTYGILICLRCSGFHRSLGVSVSFVRSLSLDSWTPKQVFAMRLGSNFQMQEFFRRQRISNTDIRVRYQSKAAGVYR 118
BLAST of mRNA_M-pyrifera_M_contig11695.3507.1 vs. uniprot
Match: A0A7R9A6L9_9CRUS (Hypothetical protein n=1 Tax=Darwinula stevensoni TaxID=69355 RepID=A0A7R9A6L9_9CRUS) HSP 1 Score: 105 bits (261), Expect = 1.670e-24 Identity = 47/109 (43.12%), Postives = 71/109 (65.14%), Query Frame = 1
Query: 16 PFPRAALKRVQKLEGNSACMDCGQPETSWGGPTYGILLCVKCAGRHRSLGTHLTVIKSLTMDRWDAGQVKRMELGGNGQLRAWF--QKCQTENSALEMKYRTKAATLYR 336
P +A L ++ +GN+ C +CG W TYGIL+C+ C G+HRSLG HL+ ++S+TMD+W ++K+M++GGN Q R + Q +S ++ KY TKAA+LYR
Sbjct: 4 PQTQATLNELRMHKGNNICFECGACNPQWASITYGILICLDCCGKHRSLGVHLSFVRSITMDKWKEAELKKMKVGGNQQAREFLMSQPDYNHSSPIQQKYNTKAASLYR 112
BLAST of mRNA_M-pyrifera_M_contig11695.3507.1 vs. uniprot
Match: A0A7S2V5A2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5A2_9STRA) HSP 1 Score: 103 bits (258), Expect = 3.120e-24 Identity = 43/102 (42.16%), Postives = 67/102 (65.69%), Query Frame = 1
Query: 31 ALKRVQKLEGNSACMDCGQPETSWGGPTYGILLCVKCAGRHRSLGTHLTVIKSLTMDRWDAGQVKRMELGGNGQLRAWFQKCQTENSALEMKYRTKAATLYR 336
A K ++++ GN+ C+DC P W TYG +C+ C+G+HRSLG H++ ++S+TMD W Q++ M+ GGN +LR WF++ ++ AL KY AA LY+
Sbjct: 9 AAKELRQIPGNTTCVDCKAPHPQWASVTYGSFICLDCSGQHRSLGVHMSFVRSVTMDSWSDKQIRMMQCGGNDKLRDWFRQHNIDSLALVPKYHEPAAELYK 110
BLAST of mRNA_M-pyrifera_M_contig11695.3507.1 vs. uniprot
Match: A0A1Y2BAD4_9FUNG (ArfGap-domain-containing protein (Fragment) n=2 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y2BAD4_9FUNG) HSP 1 Score: 101 bits (251), Expect = 6.450e-24 Identity = 46/100 (46.00%), Postives = 65/100 (65.00%), Query Frame = 1
Query: 43 VQKLEGNSACMDCGQPETSWGGPTYGILLCVKCAGRHRSLGTHLTVIKSLTMDRWDAGQVKRMELGGNGQLRAWFQKCQT--ENSALEMKYRTKAATLYR 336
+QK EGN+ C+DCG P W TYGI C+ C+G HRSLG H++ ++S+TMD+W Q+K+MELGGN + +FQ E +++ KY + A LYR
Sbjct: 3 LQKQEGNNICIDCGAPNPQWASVTYGIFFCLNCSGIHRSLGVHISFVRSITMDKWSDEQLKKMELGGNTKALQFFQSQPDYREGMSIKEKYNSNFAKLYR 102
BLAST of mRNA_M-pyrifera_M_contig11695.3507.1 vs. uniprot
Match: A0A6G1SJN5_9ACAR (Uncharacterized protein F07F6.4 (Fragment) n=1 Tax=Aceria tosichella TaxID=561515 RepID=A0A6G1SJN5_9ACAR) HSP 1 Score: 98.6 bits (244), Expect = 7.960e-24 Identity = 42/105 (40.00%), Postives = 68/105 (64.76%), Query Frame = 1
Query: 25 RAALKRVQKLEGNSACMDCGQPETSWGGPTYGILLCVKCAGRHRSLGTHLTVIKSLTMD-RWDAGQVKRMELGGNGQLRAWFQKCQTENSALEMKYRTKAATLYR 336
+AA+ +++ L N +C DCG W +YG+ LC+ C+ HRSLG H++ I+S+T+D W Q+K M+LGGN A+F++ E S ++ KY+++AA LY+
Sbjct: 31 KAAMAKLKSLPANKSCFDCGNKSALWASISYGVFLCIDCSAIHRSLGVHISFIRSITLDTNWTRAQLKAMQLGGNANAVAFFKQHSCETSEVQQKYKSRAAALYK 135
BLAST of mRNA_M-pyrifera_M_contig11695.3507.1 vs. uniprot
Match: A0A835ZEM7_9STRA (Arf-GAP domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEM7_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 9.370e-24 Identity = 40/66 (60.61%), Postives = 55/66 (83.33%), Query Frame = 1
Query: 139 CAGRHRSLGTHLTVIKSLTMDRWDAGQVKRMELGGNGQLRAWFQKCQTENSALEMKYRTKAATLYR 336
CAGRHRSLG+H++ I+SLT+DRW+ + ++LGGN QL +W +C+ +NSA+E+KYRTKAATLYR
Sbjct: 3 CAGRHRSLGSHVSTIRSLTLDRWEERHIASLKLGGNAQLHSWLTRCKVQNSAIEVKYRTKAATLYR 68
BLAST of mRNA_M-pyrifera_M_contig11695.3507.1 vs. uniprot
Match: A0A4D9D4X6_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D4X6_9STRA) HSP 1 Score: 104 bits (259), Expect = 1.040e-23 Identity = 45/108 (41.67%), Postives = 72/108 (66.67%), Query Frame = 1
Query: 13 GPFPRAALKRVQKLEGNSACMDCGQPETSWGGPTYGILLCVKCAGRHRSLGTHLTVIKSLTMDRWDAGQVKRMELGGNGQLRAWFQKCQTENSALEMKYRTKAATLYR 336
GPFP L ++ GN+ C DCG +T W TYGIL+C++C+G HRSLG ++ ++SL++D W QV M LG N Q++ +F++ + N+ + ++Y++KAA +YR
Sbjct: 11 GPFPPDILLEIKNSPGNNQCCDCGSFDTEWASVTYGILICLRCSGFHRSLGVSVSFVRSLSLDSWTPKQVFAMRLGSNFQMQEFFRRQRISNTDIRVRYQSKAAGVYR 118 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11695.3507.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11695.3507.1 >prot_M-pyrifera_M_contig11695.3507.1 ID=prot_M-pyrifera_M_contig11695.3507.1|Name=mRNA_M-pyrifera_M_contig11695.3507.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=112bp MWEPGPFPRAALKRVQKLEGNSACMDCGQPETSWGGPTYGILLCVKCAGRback to top mRNA from alignment at M-pyrifera_M_contig11695:2516..9631+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig11695.3507.1 ID=mRNA_M-pyrifera_M_contig11695.3507.1|Name=mRNA_M-pyrifera_M_contig11695.3507.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7116bp|location=Sequence derived from alignment at M-pyrifera_M_contig11695:2516..9631+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig11695:2516..9631+ >mRNA_M-pyrifera_M_contig11695.3507.1 ID=mRNA_M-pyrifera_M_contig11695.3507.1|Name=mRNA_M-pyrifera_M_contig11695.3507.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=672bp|location=Sequence derived from alignment at M-pyrifera_M_contig11695:2516..9631+ (Macrocystis pyrifera P11B4 male)back to top |