mRNA_M-pyrifera_M_contig116765.3473.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig116765.3473.1 vs. uniprot
Match: A0A7K1ZBW6_9ACTN (MFS transporter n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1ZBW6_9ACTN) HSP 1 Score: 230 bits (586), Expect = 9.260e-71 Identity = 118/184 (64.13%), Postives = 148/184 (80.43%), Query Frame = 1
Query: 4 AAVLISVLLRRSTRHDEPILYLPLFRDHNFALGSALSFLVAGTFAGTFLAFVQLMNEGWGLSLLQSGLAVGLIPAIGGPMSVVSGRLADRFGHRFVILPGSLAMAAGGAFMYFSVTEERQLVAVWLPFVV-YGLGVGFAHAACQAAALSNVEQSRLGMGSAMNRISQDIGQTVSAAVVIALLAR 552
A +L++ L++RS H EPILY+PLF +H+F +GSALSF +AG F G+FLAFV ++EGWGLSL ++GLAVGLIPAIGGPMSVVSGRLADRFGHR VILPGSL MAAGG +M+ + + Q+ ++W+P VV YG+GVG HAACQAAAL+ V + RLG+G AMNRI +IG T+S A+VIAL R
Sbjct: 238 ALILLAGLVKRSHVHPEPILYVPLFANHDFRVGSALSFFLAGNFMGSFLAFVTFLHEGWGLSLFKAGLAVGLIPAIGGPMSVVSGRLADRFGHRTVILPGSLMMAAGGLWMWSAAGSQPQIWSLWVPVVVIYGIGVGLGHAACQAAALTTVTEDRLGIGGAMNRIFMEIGGTISIAIVIALFVR 421
BLAST of mRNA_M-pyrifera_M_contig116765.3473.1 vs. uniprot
Match: A0A3M2GRV9_ACTSX (MFS transporter n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GRV9_ACTSX) HSP 1 Score: 216 bits (549), Expect = 4.550e-65 Identity = 110/184 (59.78%), Postives = 144/184 (78.26%), Query Frame = 1
Query: 1 VAAVLISVLLRRSTRHDEPILYLPLFRDHNFALGSALSFLVAGTFAGTFLAFVQLMNEGWGLSLLQSGLAVGLIPAIGGPMSVVSGRLADRFGHRFVILPGSLAMAAGGAFMYFSVTEERQLVAVWLPF-VVYGLGVGFAHAACQAAALSNVEQSRLGMGSAMNRISQDIGQTVSAAVVIALLA 549
VA V ++ L+ RS RH EPIL+LPLF H+F LG+ALSF++AG F GTFLAF+ L+ + WGLSL ++GLAV +IPAIGGP+SVV+GRLAD+ GHR VI+PG++ M A G +M+ SV+ R+L +WLP V+Y GVG AHAACQAAAL+ RLG+ SAM+RI+Q+IG T+S A+VIA+LA
Sbjct: 241 VAVVALTGLVHRSRRHAEPILHLPLFELHDFRLGTALSFVLAGNFGGTFLAFITLLTDAWGLSLFRAGLAVAVIPAIGGPLSVVAGRLADQRGHRAVIVPGAVCMGAAGVWMFASVSSTRELTGLWLPVAVLYATGVGLAHAACQAAALAEAPSGRLGVASAMSRIAQEIGNTISVAIVIAVLA 424
BLAST of mRNA_M-pyrifera_M_contig116765.3473.1 vs. uniprot
Match: A0A358A159_9ACTN (MFS transporter (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A358A159_9ACTN) HSP 1 Score: 174 bits (442), Expect = 3.300e-50 Identity = 91/182 (50.00%), Postives = 126/182 (69.23%), Query Frame = 1
Query: 4 AAVLISVLLRRSTRHDEPILYLPLFRDHNFALGSALSFLVAGTFAGTFLAFVQLMNEGWGLSLLQSGLAVGLIPAIGGPMSVVSGRLADRFGHRFVILPGSLAMAAGGAFMYFSVTEERQLVAVWLPF-VVYGLGVGFAHAACQAAALSNVEQSRLGMGSAMNRISQDIGQTVSAAVVIALL 546
+ VL + L+RRS RH PIL L LF +F G L LVAG+F G FL +Q + +GW LSLL++GLA+ IPAI GP++VV+G++ADR GHR VI+PG + M A G + +E+QL + W+P +Y +GVG AHAACQA A+++V RLGMG+ M+RISQ+IG ++AA+ I L+
Sbjct: 166 SVVLGAALVRRSRRHPSPILDLDLFAIPSFRSGMGLQLLVAGSFGGVFLTELQFLTDGWDLSLLEAGLAIAAIPAIAGPLTVVAGQIADRHGHRIVIVPGMVGMIAAGLGFALLIGDEQQLWSRWVPINALYAVGVGLAHAACQAVAVNDVPAERLGMGAGMSRISQEIGNALTAAIAITLI 347
BLAST of mRNA_M-pyrifera_M_contig116765.3473.1 vs. uniprot
Match: A0A2D8GF71_9ACTN (MFS domain-containing protein n=7 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8GF71_9ACTN) HSP 1 Score: 174 bits (442), Expect = 3.850e-49 Identity = 92/184 (50.00%), Postives = 126/184 (68.48%), Query Frame = 1
Query: 4 AAVLISVLLRRSTRHDEPILYLPLFRDHNFALGSALSFLVAGTFAGTFLAFVQLMNEGWGLSLLQSGLAVGLIPAIGGPMSVVSGRLADRFGHRFVILPGSLAMAAGGAFMYFSVTEERQLVAVWLPF-VVYGLGVGFAHAACQAAALSNVEQSRLGMGSAMNRISQDIGQTVSAAVVIALLAR 552
+ VL + L+RRS RH PIL L LF +F G L LVAG+F G FL +Q + +GW LSLL++GLA+ IPAI GP++VV+GR+ADR GHR VI+PG + M A G + +E+ L + W+P +Y +GVG AHAACQA A+++V RLGMG+ M+RISQ+IG ++AA+ I L+ R
Sbjct: 240 SVVLGAALVRRSRRHPSPILDLDLFTIPSFRSGMGLQLLVAGSFGGVFLTELQFLTDGWNLSLLEAGLAIAAIPAIAGPLTVVAGRVADRHGHRTVIVPGMVGMIAAGLGFALLIGDEQHLWSRWVPINALYAVGVGLAHAACQAVAVNDVPAERLGMGAGMSRISQEIGNALTAAIAITLIER 423
BLAST of mRNA_M-pyrifera_M_contig116765.3473.1 vs. uniprot
Match: A0A3C0HR58_9ACTN (MFS domain-containing protein (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C0HR58_9ACTN) HSP 1 Score: 169 bits (427), Expect = 4.780e-49 Identity = 88/177 (49.72%), Postives = 122/177 (68.93%), Query Frame = 1
Query: 4 AAVLISVLLRRSTRHDEPILYLPLFRDHNFALGSALSFLVAGTFAGTFLAFVQLMNEGWGLSLLQSGLAVGLIPAIGGPMSVVSGRLADRFGHRFVILPGSLAMAAGGAFMYFSVTEERQLVAVWLPF-VVYGLGVGFAHAACQAAALSNVEQSRLGMGSAMNRISQDIGQTVSAAV 531
+ VL + L+RRS RH PIL L LF +F G L LVAG+F G FL +Q + +GW LSLL++G+A+ IPAI GP++VV+GR+ADR GHR VI+PG + M A G + +E+ L + W+P +Y +GVG AHAACQA A+++V RLGMG+ M+RISQ+IG ++AA+
Sbjct: 92 SVVLGAALVRRSQRHPSPILDLDLFTIPSFRSGMGLQLLVAGSFGGVFLTELQFLTDGWNLSLLEAGVAIAAIPAIAGPLTVVAGRVADRHGHRTVIVPGMVGMIAAGLGFALLIGDEQHLWSRWVPINALYAVGVGLAHAACQAVAVNDVPAERLGMGAGMSRISQEIGNALTAAI 268
BLAST of mRNA_M-pyrifera_M_contig116765.3473.1 vs. uniprot
Match: A0A7Y2GJD8_9ACTN (MFS transporter n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2GJD8_9ACTN) HSP 1 Score: 172 bits (436), Expect = 1.670e-48 Identity = 86/179 (48.04%), Postives = 123/179 (68.72%), Query Frame = 1
Query: 16 ISVLLRRSTRHDEPILYLPLFRDHNFALGSALSFLVAGTFAGTFLAFVQLMNEGWGLSLLQSGLAVGLIPAIGGPMSVVSGRLADRFGHRFVILPGSLAMAAGGAFMYFSVTEERQLVAVWLPFV-VYGLGVGFAHAACQAAALSNVEQSRLGMGSAMNRISQDIGQTVSAAVVIALLA 549
++ ++ RS H PIL+LPL+R H+FALGS L+ ++AG+F FLA++ L GW +SL Q+GLA+ IP I GP++ V+G LADRFG R VI+PG MAA G F +++ ER + VWLP ++ +GVG AHAA ++A+ V + RLG+G AM+RI D+G T+ A ++ALLA
Sbjct: 232 LAAMITRSRHHPSPILHLPLYRQHDFALGSMLNLVIAGSFPAMFLAWIALFTNGWDMSLSQAGLAIAFIPMIAGPLTFVAGTLADRFGPRAVIVPGCAFMAAAGGFFTVAISAERNIARVWLPGAFLFAVGVGLAHAATHSSAMVTVPEDRLGVGGAMSRIGLDVGGTIWVAFMVALLA 410
BLAST of mRNA_M-pyrifera_M_contig116765.3473.1 vs. uniprot
Match: A0A2E8N6X1_9ACTN (MFS domain-containing protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8N6X1_9ACTN) HSP 1 Score: 157 bits (396), Expect = 1.910e-42 Identity = 89/182 (48.90%), Postives = 113/182 (62.09%), Query Frame = 1
Query: 4 AAVLISVLLRRSTRHDEPILYLPLFRDHNFALGSALSFLVAGTFAGTFLAFVQLMNEGWGLSLLQSGLAVGLIPAIGGPMSVVSGRLADRFGHRFVILPGSLAMAAGGAFMYFSVTEERQLVAVWLPFV-VYGLGVGFAHAACQAAALSNVEQSRLGMGSAMNRISQDIGQTVSAAVVIALL 546
A V + +L+RRS + IL L L+R FA G+ L FLVAG FAGT+LA + L+ W +S +G + ++P IGGPMS VSGRLADRFGHR +I+PG LAM G V +E L +W P V VY LG+G AHA C + AL V + LG A NRI Q++G VS AV +ALL
Sbjct: 248 APVALGLLVRRSVDRHDAILDLSLYRVRYFARGNLLGFLVAGNFAGTYLALIALLTGAWAMSPSTAGATLAIVPLIGGPMSFVSGRLADRFGHRRLIVPGGLAMVVGALAFRAGVGDEADLT-LWFPSVAVYALGIGLAHANCASLALRYVPVASLGQAGATNRIMQEVGTVVSVAVAVALL 428
BLAST of mRNA_M-pyrifera_M_contig116765.3473.1 vs. uniprot
Match: A0A351IWJ0_9ACTN (MFS domain-containing protein (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A351IWJ0_9ACTN) HSP 1 Score: 139 bits (349), Expect = 9.710e-37 Identity = 78/178 (43.82%), Postives = 107/178 (60.11%), Query Frame = 1
Query: 16 ISVLLRRSTRHDEPILYLPLFRDHNFALGSALSFLVAGTFAGTFLAFVQLMNEGWGLSLLQSGLAVGLIPAIGGPMSVVSGRLADRFGHRFVILPGSLAMAAGGAFMYFSVTEERQLVAVWLPFV-VYGLGVGFAHAACQAAALSNVEQSRLGMGSAMNRISQDIGQTVSAAVVIALL 546
+++++RRS H IL L L+R F G+ ++FL+AG FAGT+LA + L+ W +S +G A+ L+P IGGPMS VSGRLADR+GHR +++PG M G + V + + +W P V +Y LG+G AHA + AL V LG A NRI +IG S AV IALL
Sbjct: 108 LAMVVRRSASHPHAILDLSLYRVRYFGRGNLMAFLIAGNFAGTYLALITLLTGAWAMSPSAAGAALALVPLIGGPMSFVSGRLADRYGHRRLLVPGGACMVVGALWFRSGVGPDPDMW-LWFPAVGLYALGIGLAHANSASLALRFVPGPSLGQAGATNRIMTEIGSVCSVAVTIALL 284
BLAST of mRNA_M-pyrifera_M_contig116765.3473.1 vs. uniprot
Match: A0A3D5K342_9ACTN (MFS domain-containing protein (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3D5K342_9ACTN) HSP 1 Score: 141 bits (356), Expect = 1.230e-36 Identity = 76/172 (44.19%), Postives = 107/172 (62.21%), Query Frame = 1
Query: 34 RSTRHDEPILYLPLFRDHNFALGSALSFLVAGTFAGTFLAFVQLMNEGWGLSLLQSGLAVGLIPAIGGPMSVVSGRLADRFGHRFVILPGSLAMAAGGAFMYFSVTEERQLVAVWLPFV-VYGLGVGFAHAACQAAALSNVEQSRLGMGSAMNRISQDIGQTVSAAVVIALL 546
RS++ D+ IL + L+R + G+AL+FL+AG FAGT+LAF+ L+ WG++ +G + ++P IGGPMS +SGR+ADRFGHR +I+PG L M G + V E L ++W P V +Y LG+G AHA + A+ V LG A NRI + G S AV +ALL
Sbjct: 262 RSSKRDDAILDMSLYRIRYYPRGNALAFLIAGNFAGTYLAFITLLVGPWGMAPAAAGATLAIVPLIGGPMSFLSGRMADRFGHRRLIVPGGLCMVVGALWFRSGVGETTDL-SLWFPAVGLYALGIGLAHANSASLAMRYVPAKSLGQAGATNRIMSEFGSVASVAVTVALL 432
BLAST of mRNA_M-pyrifera_M_contig116765.3473.1 vs. uniprot
Match: A0A2E0T290_9ACTN (MFS domain-containing protein (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0T290_9ACTN) HSP 1 Score: 132 bits (333), Expect = 4.560e-36 Identity = 66/133 (49.62%), Postives = 94/133 (70.68%), Query Frame = 1
Query: 157 VQLMNEGWGLSLLQSGLAVGLIPAIGGPMSVVSGRLADRFGHRFVILPGSLAMAAGGAFMYFSVTEERQLVAVWLPF-VVYGLGVGFAHAACQAAALSNVEQSRLGMGSAMNRISQDIGQTVSAAVVIALLAR 552
+Q + +GW LSLL++GLA+ IPAI GP++VV+GR+ADR GHR VI+PG + M A G + + +QL + W+P +Y +GVG AHAACQA A+ +V LGMG+ M+RISQ+IG ++AA+ I L+ R
Sbjct: 2 LQFLTDGWDLSLLEAGLAIAAIPAIAGPLTVVAGRIADRHGHRIVIVPGMVGMIAAGLGFALLIGDGQQLWSRWVPINALYAVGVGLAHAACQAVAVDDVPAECLGMGAGMSRISQEIGNALTAAIAITLIER 134 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116765.3473.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig116765.3473.1 >prot_M-pyrifera_M_contig116765.3473.1 ID=prot_M-pyrifera_M_contig116765.3473.1|Name=mRNA_M-pyrifera_M_contig116765.3473.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=184bp VAAVLISVLLRRSTRHDEPILYLPLFRDHNFALGSALSFLVAGTFAGTFLback to top mRNA from alignment at M-pyrifera_M_contig116765:2..553+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig116765.3473.1 ID=mRNA_M-pyrifera_M_contig116765.3473.1|Name=mRNA_M-pyrifera_M_contig116765.3473.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=552bp|location=Sequence derived from alignment at M-pyrifera_M_contig116765:2..553+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig116765:2..553+ >mRNA_M-pyrifera_M_contig116765.3473.1 ID=mRNA_M-pyrifera_M_contig116765.3473.1|Name=mRNA_M-pyrifera_M_contig116765.3473.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1104bp|location=Sequence derived from alignment at M-pyrifera_M_contig116765:2..553+ (Macrocystis pyrifera P11B4 male)back to top |