mRNA_M-pyrifera_M_contig116452.3426.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig116452.3426.1 vs. uniprot
Match: A0A6I6AAT3_9PLAN (Tryptophan synthase alpha chain n=14 Tax=Gimesia TaxID=1649453 RepID=A0A6I6AAT3_9PLAN) HSP 1 Score: 353 bits (905), Expect = 1.770e-121 Identity = 179/186 (96.24%), Postives = 185/186 (99.46%), Query Frame = 1
Query: 1 LNNGFHVHDLFEALKALSADESVNLPALVGMVSYAIIFRYGAERFLKEAADAGFSGLIVPDLPGDEASEFVELTRASELDLVQLVSPLTPEDRTKRIVQSASGFIYCIAVAGTTGVRDELPAELTAHLESLRSLTDLPLAVGFGISKPAHVDTLRGKADGFIIGSAIVKQFAAFSDPDQTREAVIA 558
LNNGFHVHDLFEALKALSADESV+LPALVGMVSYAIIFRYGAERFLKEAA+AGFSGLIVPDLPGDEA+EFVELT+A++LDLVQLVSPLTPEDRTKRIVQSASGFIYCIAVAGTTGVRDELP ELTAHLESLRSLTDLPLAVGFGISKPAHVDTLRGKADGFIIGSAIVKQFAAFSDPDQTREAVIA
Sbjct: 73 LNNGFHVHDLFEALKALSADESVDLPALVGMVSYAIIFRYGAERFLKEAAEAGFSGLIVPDLPGDEAAEFVELTKAAQLDLVQLVSPLTPEDRTKRIVQSASGFIYCIAVAGTTGVRDELPGELTAHLESLRSLTDLPLAVGFGISKPAHVDTLRGKADGFIIGSAIVKQFAAFSDPDQTREAVIA 258
BLAST of mRNA_M-pyrifera_M_contig116452.3426.1 vs. uniprot
Match: A0A518I6R2_9PLAN (Tryptophan synthase alpha chain n=4 Tax=Gimesia TaxID=1649453 RepID=A0A518I6R2_9PLAN) HSP 1 Score: 314 bits (805), Expect = 1.650e-106 Identity = 159/185 (85.95%), Postives = 169/185 (91.35%), Query Frame = 1
Query: 1 LNNGFHVHDLFEALKALSADESVNLPALVGMVSYAIIFRYGAERFLKEAADAGFSGLIVPDLPGDEASEFVELTRASELDLVQLVSPLTPEDRTKRIVQSASGFIYCIAVAGTTGVRDELPAELTAHLESLRSLTDLPLAVGFGISKPAHVDTLRGKADGFIIGSAIVKQFAAFSDPDQTREAVI 555
LNNGFHVHDLFEALKALS D SV LP LVGMVSYAIIFRYGAE+FL+EA AGFSGLIVPDLPGDEA EF E T+ + LDLVQLVSPLTPEDRTKRIVQ+ASGFIYCI+VAGTTGVRDELP ELTAHL+SLR+LTDLPLAVGFGIS+P HVDTLRGKADGFIIGSAIVKQFAAFSDP QT + VI
Sbjct: 56 LNNGFHVHDLFEALKALSEDSSVTLPPLVGMVSYAIIFRYGAEKFLQEAEAAGFSGLIVPDLPGDEAPEFAEKTKTANLDLVQLVSPLTPEDRTKRIVQAASGFIYCISVAGTTGVRDELPEELTAHLKSLRNLTDLPLAVGFGISQPKHVDTLRGKADGFIIGSAIVKQFAAFSDPSQTVKDVI 240
BLAST of mRNA_M-pyrifera_M_contig116452.3426.1 vs. uniprot
Match: A6C191_9PLAN (Tryptophan synthase alpha chain n=10 Tax=Planctomycetaceae TaxID=126 RepID=A6C191_9PLAN) HSP 1 Score: 312 bits (799), Expect = 2.410e-105 Identity = 157/186 (84.41%), Postives = 170/186 (91.40%), Query Frame = 1
Query: 1 LNNGFHVHDLFEALKALSADESVNLPALVGMVSYAIIFRYGAERFLKEAADAGFSGLIVPDLPGDEASEFVELTRASELDLVQLVSPLTPEDRTKRIVQSASGFIYCIAVAGTTGVRDELPAELTAHLESLRSLTDLPLAVGFGISKPAHVDTLRGKADGFIIGSAIVKQFAAFSDPDQTREAVIA 558
LNN FHVHDLFE+LK LSAD++VNLP LV MVSYAIIFRYGAE+FLKEAA+AGFSGLIVPDLPGDEAS+F + +ASELDLVQLVSPLTPE RT+RIVQSASGFIYCI+VAGTTGVRDELP ELTAHLE+LR LTDLPLAVGFGIS P HV+TLRGKADGFIIGSAIVKQFAAFSD Q RE +IA
Sbjct: 73 LNNKFHVHDLFESLKTLSADKTVNLPPLVAMVSYAIIFRYGAEKFLKEAAEAGFSGLIVPDLPGDEASDFAQQVKASELDLVQLVSPLTPEGRTRRIVQSASGFIYCISVAGTTGVRDELPPELTAHLEALRELTDLPLAVGFGISNPEHVNTLRGKADGFIIGSAIVKQFAAFSDESQKREDIIA 258
BLAST of mRNA_M-pyrifera_M_contig116452.3426.1 vs. uniprot
Match: A0A517WT53_9PLAN (Tryptophan synthase alpha chain n=3 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WT53_9PLAN) HSP 1 Score: 302 bits (773), Expect = 1.220e-101 Identity = 152/185 (82.16%), Postives = 166/185 (89.73%), Query Frame = 1
Query: 1 LNNGFHVHDLFEALKALSADESVNLPALVGMVSYAIIFRYGAERFLKEAADAGFSGLIVPDLPGDEASEFVELTRASELDLVQLVSPLTPEDRTKRIVQSASGFIYCIAVAGTTGVRDELPAELTAHLESLRSLTDLPLAVGFGISKPAHVDTLRGKADGFIIGSAIVKQFAAFSDPDQTREAVI 555
LNN F VH+LF+ LK+LS+D++ LP LVGMVSYAIIFRYGAE+FL EA+ AGFSGLIVPDLPGDEA EF + T+ + LDLVQLVSPLTPEDRTKRIVQ+ASGFIYCI+VAGTTGVRDELPAELT HLESLR LTDLPLAVGFGISKP HVDTLRGKADGFIIGSAIVKQFAAFSD +QTR VI
Sbjct: 56 LNNHFQVHELFDVLKSLSSDQTTTLPPLVGMVSYAIIFRYGAEKFLNEASAAGFSGLIVPDLPGDEALEFSQKTQLANLDLVQLVSPLTPEDRTKRIVQTASGFIYCISVAGTTGVRDELPAELTTHLESLRQLTDLPLAVGFGISKPEHVDTLRGKADGFIIGSAIVKQFAAFSDSNQTRAEVI 240
BLAST of mRNA_M-pyrifera_M_contig116452.3426.1 vs. uniprot
Match: A0A3E0Q679_9BACT (Tryptophan synthase alpha chain n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3E0Q679_9BACT) HSP 1 Score: 219 bits (558), Expect = 9.420e-69 Identity = 109/185 (58.92%), Postives = 135/185 (72.97%), Query Frame = 1
Query: 1 LNNGFHVHDLFEALKALSADESVNLPALVGMVSYAIIFRYGAERFLKEAADAGFSGLIVPDLPGDEASEFVELTRASELDLVQLVSPLTPEDRTKRIVQSASGFIYCIAVAGTTGVRDELPAELTAHLESLRSLTDLPLAVGFGISKPAHVDTLRGKADGFIIGSAIVKQFAAFSDPDQTREAVI 555
L HV D+F + L ++ +LP LV MVSYAIIFR GAE FL +AA AGFSG+IVPDLPGDEA++F +L RA LDLVQLV+P TP +R + I++S SGF+YCIAV+GTTGVR+E+ EL A L LR TDLPL VGFGIS+P H+D LRG ADG I+GS IV+ + +D D RE V+
Sbjct: 75 LEKQLHVRDIFAGISEL---DTQSLPPLVAMVSYAIIFRIGAEAFLSQAAQAGFSGMIVPDLPGDEAADFFQLVRAENLDLVQLVAPTTPRERVREILKSCSGFVYCIAVSGTTGVREEIAEELLAQLRWLREETDLPLCVGFGISRPEHIDPLRGLADGAIVGSGIVRHLESLADGDADRETVV 256
BLAST of mRNA_M-pyrifera_M_contig116452.3426.1 vs. uniprot
Match: A0A518CRC3_9PLAN (Tryptophan synthase alpha chain n=1 Tax=Polystyrenella longa TaxID=2528007 RepID=A0A518CRC3_9PLAN) HSP 1 Score: 210 bits (535), Expect = 2.610e-65 Identity = 107/185 (57.84%), Postives = 130/185 (70.27%), Query Frame = 1
Query: 1 LNNGFHVHDLFEALKALSADESVNLPALVGMVSYAIIFRYGAERFLKEAADAGFSGLIVPDLPGDEASEFVELTRASELDLVQLVSPLTPEDRTKRIVQSASGFIYCIAVAGTTGVRDELPAELTAHLESLRSLTDLPLAVGFGISKPAHVDTLRGKADGFIIGSAIVKQFAAFSDPDQTREAVI 555
L G HV D+F+ + AL D NLP LV MV+YAII+R G E FL + AGF G+IVPDLPGDEA+ F EL + ELDLVQLVSP T +R RI+ +ASGF+YCI+VAG TGVRD+LP EL L LR TDLPLAVGFGI KP +D LRG ADG I+GSAIV+Q ++ +EA++
Sbjct: 73 LGRGLHVEDIFKTVAALPTD---NLPPLVAMVAYAIIYRIGPEEFLTKLKLAGFCGMIVPDLPGDEAASFFELAQKHELDLVQLVSPTTTPERVSRILAAASGFVYCISVAGITGVRDDLPPELKDQLRWLREKTDLPLAVGFGIGKPEQIDMLRGDADGVIVGSAIVRQLEPLTESPDQKEAIL 254
BLAST of mRNA_M-pyrifera_M_contig116452.3426.1 vs. uniprot
Match: UPI001F0DF8DC (tryptophan synthase subunit alpha n=1 Tax=Rubinisphaera sp. JC658 TaxID=2713176 RepID=UPI001F0DF8DC) HSP 1 Score: 210 bits (534), Expect = 4.430e-65 Identity = 105/185 (56.76%), Postives = 133/185 (71.89%), Query Frame = 1
Query: 1 LNNGFHVHDLFEALKALSADESVNLPALVGMVSYAIIFRYGAERFLKEAADAGFSGLIVPDLPGDEASEFVELTRASELDLVQLVSPLTPEDRTKRIVQSASGFIYCIAVAGTTGVRDELPAELTAHLESLRSLTDLPLAVGFGISKPAHVDTLRGKADGFIIGSAIVKQFAAFSDPDQTREAVI 555
L G V D+F+ + A + + S LV MV+Y+++FR G ERFL +A AGF+GLIVPDLPGDEASEF E TR LDLVQL++P TP R ++I+++ASGF+YCI++AGTTG RD+LP ELT HL+ LR TDLPLAVGFG+S P VD LRG ADG I+GS IV+ SD +R+ VI
Sbjct: 74 LQKGIRVGDIFDMVSAQTKNGSA---PLVAMVAYSLVFRVGVERFLADAKSAGFAGLIVPDLPGDEASEFAERTRQHGLDLVQLIAPTTPVHRAEKIIEAASGFLYCISIAGTTGARDQLPPELTEHLDRLREKTDLPLAVGFGVSGPEQVDILRGHADGVIVGSRIVRYLEKLSDKFTSRDDVI 255
BLAST of mRNA_M-pyrifera_M_contig116452.3426.1 vs. uniprot
Match: A0A3B1DA20_9ZZZZ (Tryptophan synthase (Fragment) n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1DA20_9ZZZZ) HSP 1 Score: 206 bits (525), Expect = 4.900e-64 Identity = 102/176 (57.95%), Postives = 130/176 (73.86%), Query Frame = 1
Query: 1 LNNGFHVHDLFEALKALSADESVNLPALVGMVSYAIIFRYGAERFLKEAADAGFSGLIVPDLPGDEASEFVELTRASELDLVQLVSPLTPEDRTKRIVQSASGFIYCIAVAGTTGVRDELPAELTAHLESLRSLTDLPLAVGFGISKPAHVDTLRGKADGFIIGSAIVKQFAAFSD 528
LNNG V D+F + +L DE P LV MVSYAIIFR+G E FL +AA AGF+GLIVPDLPGDEA F + + ++LDL+QL++P TP DR ++I++ SGF+YC++VAGTTG R ELP EL L+ LR T+LPLAVGFGIS+P VD LRG A+G I+GSAIV+Q + S+
Sbjct: 73 LNNGLQVKDIFAGIASLPTDE---FPPLVAMVSYAIIFRWGVEEFLHQAATAGFAGLIVPDLPGDEAVLFFQQAQKNQLDLIQLIAPTTPIDRAEKIMKQCSGFVYCVSVAGTTGERRELPPELQGQLKELREKTELPLAVGFGISEPKQVDMLRGYANGVIVGSAIVRQMESLSE 245
BLAST of mRNA_M-pyrifera_M_contig116452.3426.1 vs. uniprot
Match: A0A517ZBN5_9PLAN (Tryptophan synthase alpha chain n=2 Tax=Maioricimonas rarisocia TaxID=2528026 RepID=A0A517ZBN5_9PLAN) HSP 1 Score: 201 bits (510), Expect = 2.190e-61 Identity = 102/185 (55.14%), Postives = 133/185 (71.89%), Query Frame = 1
Query: 1 LNNGFHVHDLFEALKALSADESVNLPALVGMVSYAIIFRYGAERFLKEAADAGFSGLIVPDLPGDEASEFVELTRASELDLVQLVSPLTPEDRTKRIVQSASGFIYCIAVAGTTGVRDELPAELTAHLESLRSLTDLPLAVGFGISKPAHVDTLRGKADGFIIGSAIVKQFAAFSDPDQTREAVI 555
L + V +F+A+ L D + P LV MVS+AIIFR+G E F++EA +AGF+G IVPDLPGDEA+EF LT+ LDLVQLV+P TP +R K+++ S SGF+YCIAVAG TGVR+++ L + LE LR TDLPLAVGFGIS+P HVD LR +ADG I+GS IV+ F +D + +AV+
Sbjct: 81 LEHKLTVRQIFDAIAGLPKDGT---PPLVAMVSFAIIFRHGPETFVQEAKEAGFAGFIVPDLPGDEATEFFGLTQKHGLDLVQLVAPTTPRERVKQVLASCSGFVYCIAVAGITGVREQVAENLLSQLEWLRQETDLPLAVGFGISRPEHVDPLRERADGVIVGSGIVRHFQRVADGEADVDAVL 262
BLAST of mRNA_M-pyrifera_M_contig116452.3426.1 vs. uniprot
Match: A0A2E8FLE7_9PLAN (Tryptophan synthase alpha chain n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E8FLE7_9PLAN) HSP 1 Score: 200 bits (508), Expect = 3.460e-61 Identity = 103/186 (55.38%), Postives = 128/186 (68.82%), Query Frame = 1
Query: 1 LNNGFHVHDLFEALKALSADESVNLPALVGMVSYAIIFRYGAERFLKEAADAGFSGLIVPDLPGDEASEFVELTRASELDLVQLVSPLTPEDRTKRIVQSASGFIYCIAVAGTTGVRDELPAELTAHLESLRSLTDLPLAVGFGISKPAHVDTLRGKADGFIIGSAIVKQFAAFSDPDQTREAVIA 558
L G V +FE L + + P LV MVSYAI+FR G E F+ AA AGFSG+IVPDLPGDEA++ + R + LDLVQL++P TPE R + IV SASGF+YCIAVAGTTG RD LP L L LR+ TDLPLAVGFGIS+P H+ L+G+ADG I+GSA+V++ +DP E V+A
Sbjct: 75 LEAGLTVEAIFERFGELDREAT---PPLVAMVSYAIVFRIGLEAFVARAATAGFSGMIVPDLPGDEAADLGRVVRGAGLDLVQLIAPTTPESRVEAIVASASGFLYCIAVAGTTGARDALPEALAGQLAGLRTRTDLPLAVGFGISRPEHLLALKGQADGAIVGSALVRRLEPLTDPAADAETVLA 257 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116452.3426.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig116452.3426.1 >prot_M-pyrifera_M_contig116452.3426.1 ID=prot_M-pyrifera_M_contig116452.3426.1|Name=mRNA_M-pyrifera_M_contig116452.3426.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=186bp LNNGFHVHDLFEALKALSADESVNLPALVGMVSYAIIFRYGAERFLKEAAback to top mRNA from alignment at M-pyrifera_M_contig116452:3..560+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig116452.3426.1 ID=mRNA_M-pyrifera_M_contig116452.3426.1|Name=mRNA_M-pyrifera_M_contig116452.3426.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=558bp|location=Sequence derived from alignment at M-pyrifera_M_contig116452:3..560+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig116452:3..560+ >mRNA_M-pyrifera_M_contig116452.3426.1 ID=mRNA_M-pyrifera_M_contig116452.3426.1|Name=mRNA_M-pyrifera_M_contig116452.3426.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1116bp|location=Sequence derived from alignment at M-pyrifera_M_contig116452:3..560+ (Macrocystis pyrifera P11B4 male)back to top |