mRNA_M-pyrifera_M_contig11625.3373.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig11625.3373.1 vs. uniprot
Match: D7FKY0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKY0_ECTSI) HSP 1 Score: 144 bits (363), Expect = 2.660e-42 Identity = 67/109 (61.47%), Postives = 84/109 (77.06%), Query Frame = 1
Query: 1 PETKQTSYLFKCAEQDGDLRIGAFIQKAFDWYCKAMECTEDNSRYLYTLISTSGLPKSSGGGDGSDGEGPVRKYKRYKLSDGKDFSSLFFPEKEAMLKLLEHFANKSGE 327
P +QT+Y F+C+E+DGD RI F+QKAF WYC+ M+ TED RYLYTLI+ S+G GEGPVRKYKRY+LSDGKDF SLFFPEK+A+L++L+HF +KSGE
Sbjct: 18 PRRQQTTYHFRCSERDGDERIDEFVQKAFRWYCEEMKSTEDQGRYLYTLIANEEFASSAGK---DKGEGPVRKYKRYRLSDGKDFDSLFFPEKDALLRILQHFEDKSGE 123
BLAST of mRNA_M-pyrifera_M_contig11625.3373.1 vs. uniprot
Match: D8LH94_ECTSI (AAA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH94_ECTSI) HSP 1 Score: 140 bits (353), Expect = 1.890e-36 Identity = 65/106 (61.32%), Postives = 83/106 (78.30%), Query Frame = 1
Query: 10 KQTSYLFKCAEQDGDLRIGAFIQKAFDWYCKAMECTEDNSRYLYTLISTSGLPKSSGGGDGSDGEGPVRKYKRYKLSDGKDFSSLFFPEKEAMLKLLEHFANKSGE 327
K+T+Y F+C+E+DGD RI F+QKAF WYC+ M+ TED RYLYTLI+ S+G GEGPVRKYKRY+LSDGKDF SLFFPEK+A+L++L+HF +KSG+
Sbjct: 183 KKTTYHFRCSERDGDERIDEFVQKAFRWYCEEMKSTEDQGRYLYTLIANEEFASSAGK---DKGEGPVRKYKRYRLSDGKDFDSLFFPEKDALLRILQHFEDKSGK 285
BLAST of mRNA_M-pyrifera_M_contig11625.3373.1 vs. uniprot
Match: D7FQ72_ECTSI (AAA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ72_ECTSI) HSP 1 Score: 100 bits (249), Expect = 2.210e-22 Identity = 57/121 (47.11%), Postives = 72/121 (59.50%), Query Frame = 1
Query: 1 PETKQTSYLFKCAEQDGDLRIGAFIQKAFDWYCKAMECTEDNSRYLYTLISTSGLPKSSGGG----DG-SDGEG-PVRK-------YKRYKLSDGKDFSSLFFPEKEAMLKLLEHFANKSG 324
P Y F+CA +G+ ++ FI A+ WY K ME TEDN+RY+Y+L++ PK G DG D EG PV+K YKRYKL D KDF SLFFPEKE +L+ LE+F K G
Sbjct: 175 PPPTIVDYTFRCAGPEGNEKVKNFITDAYAWYTKEMESTEDNARYMYSLVAAKEPPKKKGASARYPDGMEDEEGHPVKKEDSSPIIYKRYKLGDVKDFDSLFFPEKEQLLRALENFEAKRG 295
BLAST of mRNA_M-pyrifera_M_contig11625.3373.1 vs. uniprot
Match: A0A6H5K8D9_9PHAE (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8D9_9PHAE) HSP 1 Score: 95.9 bits (237), Expect = 9.550e-21 Identity = 53/115 (46.09%), Postives = 72/115 (62.61%), Query Frame = 1
Query: 22 YLFKCAEQDGDLRIGAFIQKAFDWYCKAMECTEDNSRYLYTLISTSGLPKSSGG-------GDGSDGEG-------PVRKYKRYKLSDGKDFSSLFFPEKEAMLKLLEHFANKSG 324
Y F+C Q G++++ FIQKA++WY M+ TED+SRY+Y+LI+ +S G G DG G P+R YKRY+L D KDF SLFFPEKE +L++LE+F K G
Sbjct: 244 YDFRCDRQGGNIKVKDFIQKAYEWYTDEMKSTEDHSRYMYSLIAQPEPARSRLGIGGVEFPGMNGDGRGRNPLDPSPLR-YKRYRLGDVKDFDSLFFPEKEQLLRVLENFEAKRG 357
BLAST of mRNA_M-pyrifera_M_contig11625.3373.1 vs. uniprot
Match: A0A7R9U422_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U422_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 1.730e-20 Identity = 49/100 (49.00%), Postives = 66/100 (66.00%), Query Frame = 1
Query: 28 FKCAEQDGDLRIGAFIQKAFDWYCKAMECTEDNSRYLYTLISTSGLPKSSGGGDGSDGEGPVRKYKRYKLSDGKDFSSLFFPEKEAMLKLLEHFANKSGE 327
F+ A +GD I A+I+KAF+WY ME +DNSRY+Y L P ++ + + RKYKRYKLS+ K FS+LFFPEKE +LKL+EHF K+G+
Sbjct: 218 FRTALPNGDEVINAWIEKAFEWYVDEMEKLQDNSRYMYVLA-----PDATSLSNNDSQDDNQRKYKRYKLSEEKTFSALFFPEKEQLLKLMEHFQAKTGK 312
BLAST of mRNA_M-pyrifera_M_contig11625.3373.1 vs. uniprot
Match: A0A7S1U3S3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U3S3_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 2.180e-20 Identity = 49/100 (49.00%), Postives = 69/100 (69.00%), Query Frame = 1
Query: 28 FKCAEQDGDLRIGAFIQKAFDWYCKAMECTEDNSRYLYTLISTSGLPKSSGGGDGSDGEGPVRKYKRYKLSDGKDFSSLFFPEKEAMLKLLEHFANKSGE 327
F+ ++GD I A+I KAF WY + ME +D+SRY+Y L + + S +G+DG+ RKYKRYKLS+ K F++LFFPEK+ +LKLLEHF K+G+
Sbjct: 223 FRTKLRNGDEVINAWIDKAFQWYIQEMEKLQDDSRYMYVLCADA--TSISNNDEGNDGQ---RKYKRYKLSEEKTFNALFFPEKDQLLKLLEHFQAKTGK 317
BLAST of mRNA_M-pyrifera_M_contig11625.3373.1 vs. uniprot
Match: A0A7S2MPL9_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2MPL9_9EUKA) HSP 1 Score: 89.0 bits (219), Expect = 2.500e-18 Identity = 45/108 (41.67%), Postives = 68/108 (62.96%), Query Frame = 1
Query: 4 ETKQTSYLFKCAEQDGDLRIGAFIQKAFDWYCKAMECTEDNSRYLYTLISTSGLPKSSGGGDGSDGEGPVRKYKRYKLSDGKDFSSLFFPEKEAMLKLLEHFANKSGE 327
++K+ +F+ DG RI +Q+A +WY K + + D+SRYLYT++S L SS S+ + +R YKRY LSD K F SLFFP+KE++L LL+ F+ + G+
Sbjct: 182 DSKREQLIFELKSPDGPKRIDDLVQRALEWYKKELLSSRDDSRYLYTIVSAEKLSMSSS--KSSEDDDSIR-YKRYALSDQKTFESLFFPDKESLLSLLDDFSQRKGK 286
BLAST of mRNA_M-pyrifera_M_contig11625.3373.1 vs. uniprot
Match: A0A7S4B551_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B551_CHRCT) HSP 1 Score: 85.9 bits (211), Expect = 3.020e-17 Identity = 46/106 (43.40%), Postives = 67/106 (63.21%), Query Frame = 1
Query: 31 KCAEQDGDLRIGAFIQKAFDWYCKAMECTEDNSRYLYTLIS-------TSGLPKSSGGGDGSDGEGPVRKYKRYKLSDGKDFSSLFFPEKEAMLKLLEHFANKSGE 327
K +++DG +I FI++A WY + + D++RY+YT+IS S + + G G+D +G + YKRYKLSD K F SLFFPEKE++LKLL F K+G+
Sbjct: 198 KTSKKDGPQQIDRFIERALSWYKQELLKMRDDARYMYTMISKSPSASIVSEMTSTKRGATGADNKGGM-PYKRYKLSDQKTFKSLFFPEKESILKLLSDFQQKAGK 302
BLAST of mRNA_M-pyrifera_M_contig11625.3373.1 vs. uniprot
Match: A0A1Z5JM40_FISSO (Mitochondrial chaperone BCS1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JM40_FISSO) HSP 1 Score: 85.1 bits (209), Expect = 5.650e-17 Identity = 47/110 (42.73%), Postives = 69/110 (62.73%), Query Frame = 1
Query: 4 ETKQTSYL--FKCAEQDGDLRIGAFIQKAFDWYCKAMECTEDNSRYLYTLISTSGLPKSSGGGDGSDGEGPVRKYKRYKLSDGKDFSSLFFPEKEAMLKLLEHFANKSGE 327
E QT + F+ + G+ I F+ KA+ WY ++ +D++RYLY L STSG+P DG G V Y RY+LSD K F+SLFF +KE++LK+++HF N+SG+
Sbjct: 201 ENAQTKIVKRFRFQGESGEA-IDCFVAKAYQWYLDELKKMDDHARYLYELKSTSGVPTE----DGESSSGIV--YMRYRLSDEKTFNSLFFRQKESLLKMVDHFLNRSGK 303
BLAST of mRNA_M-pyrifera_M_contig11625.3373.1 vs. uniprot
Match: D8TL08_VOLCA (AAA domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TL08_VOLCA) HSP 1 Score: 84.0 bits (206), Expect = 1.440e-16 Identity = 46/108 (42.59%), Postives = 65/108 (60.19%), Query Frame = 1
Query: 4 ETKQTSYLFKCAEQDGDLRIGAFIQKAFDWYCKAMECTEDNSRYLYTLISTSGLPKSSGGGDGSDGEGPVRKYKRYKLSDGKDFSSLFFPEKEAMLKLLEHFANKSGE 327
+T + Y + E+DG+ RI F+Q+A + Y + D +RYLY + SG + DG G P YKRYKLS+ K F+SLF P+KEA+LKL+E F NK+G+
Sbjct: 183 KTTKVRYHLESREKDGNKRITTFLQEALEVYRREQSARVDPARYLYMPV-LSGF-REPAAADGDSGSKPSAVYKRYKLSEEKTFASLFHPDKEAILKLVEQFLNKTGK 288 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11625.3373.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11625.3373.1 >prot_M-pyrifera_M_contig11625.3373.1 ID=prot_M-pyrifera_M_contig11625.3373.1|Name=mRNA_M-pyrifera_M_contig11625.3373.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=112bp PETKQTSYLFKCAEQDGDLRIGAFIQKAFDWYCKAMECTEDNSRYLYTLIback to top mRNA from alignment at M-pyrifera_M_contig11625:579..1837- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig11625.3373.1 ID=mRNA_M-pyrifera_M_contig11625.3373.1|Name=mRNA_M-pyrifera_M_contig11625.3373.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1259bp|location=Sequence derived from alignment at M-pyrifera_M_contig11625:579..1837- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig11625:579..1837- >mRNA_M-pyrifera_M_contig11625.3373.1 ID=mRNA_M-pyrifera_M_contig11625.3373.1|Name=mRNA_M-pyrifera_M_contig11625.3373.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=672bp|location=Sequence derived from alignment at M-pyrifera_M_contig11625:579..1837- (Macrocystis pyrifera P11B4 male)back to top |