mRNA_M-pyrifera_M_contig115975.3315.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig115975.3315.1 vs. uniprot
Match: A0A7V5VB77_9BACT (TonB-dependent receptor (Fragment) n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7V5VB77_9BACT) HSP 1 Score: 191 bits (486), Expect = 3.050e-54 Identity = 98/184 (53.26%), Postives = 123/184 (66.85%), Query Frame = 1
Query: 1 RVDQRIEIFENPAEEPDATPYQSVVHDRLQSDLDLHFPGFRLEVQTAYQKNNRKEFEESDEREPGLNLVLKTGTTDIKLHHKPVGNLFGTVGISGMAQRNQTLAEEKLIPGFVLYNVAGFIYEELKLGSINLSAGFRFDKRKLNTGALLELNVDKQEKNYNALSGNLGIVWRISNPFAFSVNFG 552
RV+Q+ EI+ENPAE P ATPYQ V HD++ + L R+E A+Q N+R+EFE DE P LNL+L TGT DIK+HH P+G +FGT G S M QRNQ+LA + LIP F N+A F+YEE+ L I+LSAG R D R+L G L +D+Q + Y LSG LG VWRIS P A + NFG
Sbjct: 323 RVNQKFEIYENPAENPGATPYQRVTHDKIHLNFRLPLNNMRIEADAAWQNNHRREFEAQDEANPELNLLLGTGTLDIKVHHYPIGPVFGTAGFSLMQQRNQSLARDVLIPQFRQRNLAFFLYEEMNLRQISLSAGLRLDSRQLKIGQDNRLVLDEQVRRYQELSGLLGAVWRISAPLAIAANFG 506
BLAST of mRNA_M-pyrifera_M_contig115975.3315.1 vs. uniprot
Match: N1W3I4_9LEPT (TonB-dependent receptor plug domain protein n=1 Tax=Leptospira vanthielii serovar Holland str. Waz Holland = ATCC 700522 TaxID=1218591 RepID=N1W3I4_9LEPT) HSP 1 Score: 150 bits (380), Expect = 6.490e-39 Identity = 85/207 (41.06%), Postives = 112/207 (54.11%), Query Frame = 1
Query: 19 EIFENPAEEPDATPYQSVVHDRLQSDLDLHFPGFRLEVQTAYQKNNRKEFEE------------SDE-----------------REPGLNLVLKTGTTDIKLHHKPVGNLFGTVGISGMAQRNQTLAEEKLIPGFVLYNVAGFIYEELKLGSINLSAGFRFDKRKLNTGALLELNVDKQEKNYNALSGNLGIVWRISNPFAFSVNFG 552
E+++NP E P YQ+V HD+ F LEV YQ+NNR+E + SD+ +E GLNL L TGT DIK HHKPV GTVG+SGM QRN T+ E LIPG+ L N+ GF+ EE KLG S G R DKR ++ + +L V + KN++A +G +G VWR S PF+ ++N G
Sbjct: 344 ELYDNPNENPGGRVYQAVTHDKNHLHSFFIFSLGNLEVDAGYQRNNRREIPDKNIYVPIRNTLLSDDVDDFTKSYNIYQVNKNRKEQGLNLFLDTGTLDIKFHHKPVLGWKGTVGVSGMNQRNATIGTEPLIPGYSLINLGGFLLEEYKLGDFTFSGGLRADKRSMDIKSNADLGVSAETKNFSASTGTVGTVWRFSKPFSLALNAG 550
BLAST of mRNA_M-pyrifera_M_contig115975.3315.1 vs. uniprot
Match: UPI000773EC5B (TonB-dependent receptor n=1 Tax=Leptospira santarosai TaxID=28183 RepID=UPI000773EC5B) HSP 1 Score: 148 bits (374), Expect = 6.940e-39 Identity = 84/214 (39.25%), Postives = 116/214 (54.21%), Query Frame = 1
Query: 1 RVDQRIEIFENPAEEPDATPYQSVVHDRLQSDLDLHFPGFRLEVQTAYQKNNRKEFEESDEREP-----------------------------GLNLVLKTGTTDIKLHHKPVGNLF-GTVGISGMAQRNQTLAEEKLIPGFVLYNVAGFIYEELKLGSINLSAGFRFDKRKLNTGALLELNVDKQEKNYNALSGNLGIVWRISNPFAFSVNFG 552
R +Q ++ +NP E P +T YQ ++H++ L FP LE+ +YQ+NNR+E E ++ P GLNL L T T D K HHKP+ NL GT G+SG+ Q+N+T+ E LIP + + N+AG+ EELK GS+ LSAG R DKR N L V +Q KNY A + + G+VWRI F+ VN+G
Sbjct: 77 RREQTQDLLDNPNENPGSTVYQKLLHEKSHFHSFLIFPAGNLELDFSYQRNNRREVESKNKLLPVKDVLWNENVDVFDKSFQFYQATSRAKYQGLNLFLDTTTADAKFHHKPIFNLLQGTFGVSGLEQKNRTIGTESLIPSYGIVNIAGYFLEELKFGSLTLSAGIRGDKRSANIRNNAALGVAEQTKNYYATTNSTGLVWRIDKSFSTIVNYG 290
BLAST of mRNA_M-pyrifera_M_contig115975.3315.1 vs. uniprot
Match: UPI001962FC24 (TonB-dependent receptor n=1 Tax=Leptospira ainlahdjerensis TaxID=2810033 RepID=UPI001962FC24) HSP 1 Score: 150 bits (378), Expect = 1.120e-38 Identity = 84/212 (39.62%), Postives = 117/212 (55.19%), Query Frame = 1
Query: 7 DQRIEIFENPAEEPDATPYQSVVHDRLQSDLDLHFPGFRLEVQTAYQKNNRKEFEESD-----------------------------EREPGLNLVLKTGTTDIKLHHKPV-GNLFGTVGISGMAQRNQTLAEEKLIPGFVLYNVAGFIYEELKLGSINLSAGFRFDKRKLNTGALLELNVDKQEKNYNALSGNLGIVWRISNPFAFSVNFG 552
+Q ++F+NP E P AT +Q + H++ L P LE+ +YQ+NNR+E E + E+ GLNL L T T D K HHKP+ G + GT G+SG+ Q N+T+ E LIP + + N+AGF EELKLGS+ LSAG R DKR + L V++Q KNY A +G+ GIVWRI+ F+ +N+G
Sbjct: 326 EQTQDLFDNPNENPGATVFQKLKHEKSHFHSFLILPAGNLELDVSYQRNNRREIESKNKILPIKDTLLDETIDNFEKSFQYYQVTAREKHQGLNLYLDTATADAKFHHKPILGIIKGTAGVSGLQQTNKTIGSEPLIPSYGIVNIAGFFLEELKLGSVTLSAGVRGDKRAADIRNNTTLGVNEQTKNYYATTGSTGIVWRINKSFSSVLNYG 537
BLAST of mRNA_M-pyrifera_M_contig115975.3315.1 vs. uniprot
Match: K6IL10_9LEPT (TonB-dependent receptor n=35 Tax=Leptospira TaxID=171 RepID=K6IL10_9LEPT) HSP 1 Score: 148 bits (374), Expect = 3.930e-38 Identity = 84/214 (39.25%), Postives = 116/214 (54.21%), Query Frame = 1
Query: 1 RVDQRIEIFENPAEEPDATPYQSVVHDRLQSDLDLHFPGFRLEVQTAYQKNNRKEFEESDEREP-----------------------------GLNLVLKTGTTDIKLHHKPVGNLF-GTVGISGMAQRNQTLAEEKLIPGFVLYNVAGFIYEELKLGSINLSAGFRFDKRKLNTGALLELNVDKQEKNYNALSGNLGIVWRISNPFAFSVNFG 552
R +Q ++ +NP E P +T YQ ++H++ L FP LE+ +YQ+NNR+E E ++ P GLNL L T T D K HHKP+ NL GT G+SG+ Q+N+T+ E LIP + + N+AG+ EELK GS+ LSAG R DKR N L V +Q KNY A + + G+VWRI F+ VN+G
Sbjct: 324 RREQTQDLLDNPNENPGSTVYQKLLHEKSHFHSFLIFPAGNLELDFSYQRNNRREVESKNKLLPVKDVLWNENVDVFDKSFQFYQATSRAKYQGLNLFLDTTTADAKFHHKPIFNLLQGTFGVSGLEQKNRTIGTESLIPSYGIVNIAGYFLEELKFGSLTLSAGIRGDKRSANIRNNAALGVAEQTKNYYATTNSTGLVWRIDKSFSTIVNYG 537
BLAST of mRNA_M-pyrifera_M_contig115975.3315.1 vs. uniprot
Match: Q04V17_LEPBJ (TonB dependent receptor n=44 Tax=Leptospira TaxID=171 RepID=Q04V17_LEPBJ) HSP 1 Score: 148 bits (373), Expect = 5.370e-38 Identity = 82/214 (38.32%), Postives = 120/214 (56.07%), Query Frame = 1
Query: 1 RVDQRIEIFENPAEEPDATPYQSVVHDRLQSDLDLHFPGFRLEVQTAYQKNNRKEFEESDEREP-----------------------------GLNLVLKTGTTDIKLHHKPVGNLF-GTVGISGMAQRNQTLAEEKLIPGFVLYNVAGFIYEELKLGSINLSAGFRFDKRKLNTGALLELNVDKQEKNYNALSGNLGIVWRISNPFAFSVNFG 552
R +Q ++ +NP E P +T +Q ++H++ L FP LE+ +YQ+NNR+E E ++ P GLNL+L T T D K HHKP+ NL GT+G+SG+ QRN+T+ E LIP + + N+AG+ EELKLGS+ LSAG R DKR + + L + +Q KNY A + + G+VWRI F+ +N+G
Sbjct: 324 RREQTQDLLDNPNENPGSTVHQKLLHEKSHFHSFLIFPAGNLELDFSYQRNNRREIESKNKLFPIKDVLRDENVDIFDKSFQFYQATSKAKYQGLNLLLDTTTADAKFHHKPIFNLLQGTLGVSGLEQRNRTIGTEPLIPSYGIVNIAGYFLEELKLGSLTLSAGVRGDKRSADIKNNMTLGIAEQTKNYYATTNSTGLVWRIDKSFSAILNYG 537
BLAST of mRNA_M-pyrifera_M_contig115975.3315.1 vs. uniprot
Match: A0A4R9LVK0_9LEPT (TonB-dependent receptor n=1 Tax=Leptospira idonii TaxID=1193500 RepID=A0A4R9LVK0_9LEPT) HSP 1 Score: 147 bits (370), Expect = 1.490e-37 Identity = 81/207 (39.13%), Postives = 110/207 (53.14%), Query Frame = 1
Query: 19 EIFENPAEEPDATPYQSVVHDRLQSDLDLHFPGFRLEVQTAYQKNNRKEFEESD-----------------------------EREPGLNLVLKTGTTDIKLHHKPVGNLFGTVGISGMAQRNQTLAEEKLIPGFVLYNVAGFIYEELKLGSINLSAGFRFDKRKLNTGALLELNVDKQEKNYNALSGNLGIVWRISNPFAFSVNFG 552
++++NP E P A QSV+HD+ F LEV YQ+NNR+E + + E GLNL L TGT D+K HHKP+ GT+G+SGM Q+N T E LIPG++L N+AGF+ EE KLG S G R DKR ++ A +L V ++ KN++A +G LG VWR S P + +N G
Sbjct: 346 DLYDNPNENPGAQVSQSVIHDKNHLHSFFIFALGNLEVDAGYQRNNRREIPDKNIYVPIQKTLLDSTISDFTKAYNIYQVNQFRTEQGLNLSLDTGTLDVKFHHKPILGWKGTIGVSGMNQKNATRGTEPLIPGYLLINLAGFLLEEYKLGDFTFSGGLRADKRSVDIKANTDLGVSEETKNFSATTGTLGSVWRFSKPLSLILNVG 552
BLAST of mRNA_M-pyrifera_M_contig115975.3315.1 vs. uniprot
Match: UPI001FB48B63 (TonB-dependent receptor n=1 Tax=Rhodothermus marinus TaxID=29549 RepID=UPI001FB48B63) HSP 1 Score: 140 bits (352), Expect = 7.580e-37 Identity = 76/177 (42.94%), Postives = 108/177 (61.02%), Query Frame = 1
Query: 58 PYQSVVHDRLQSDLDLHFPGFRLEVQTAYQKNNRKEF---EESDERE---------PGLNLVLKTGTTDIKLHHKPVGNLFGTVGISGMAQRNQTLAEEKLIPGFVLYNVAGFIYEELKLGSINLSAGFRFDKRKLNTGALLELNVDKQEKNYNALSGNLGIVWRISNPFAFSVNFG 552
PYQ V HD LQ H RLE+ A+Q+N R+EF E+DE E P L L L T T+D++ HH+P+G+LFGT+G+SG QRN+TLAEE LIPG +N A +++EEL L + +S G R+D R+L+ A +L V Q + Y+A SG +G+ W++ + + N G
Sbjct: 47 PYQRVDHDLLQLRSRWHLGADRLELNAAWQQNRRREFGHHHEADEEEAPHVDEHETPSLYLRLNTLTSDLRFHHRPIGSLFGTIGLSGFFQRNETLAEEALIPGARTWNGAVYVFEELALPRLTISGGVRWDGRRLSVEANEDLGVVAQTRTYSAFSGAVGLAWQVRPDLSLAFNVG 223
BLAST of mRNA_M-pyrifera_M_contig115975.3315.1 vs. uniprot
Match: A0A2N0B7B8_9LEPT (TonB-dependent receptor n=3 Tax=Leptospira TaxID=171 RepID=A0A2N0B7B8_9LEPT) HSP 1 Score: 144 bits (363), Expect = 1.240e-36 Identity = 83/214 (38.79%), Postives = 114/214 (53.27%), Query Frame = 1
Query: 1 RVDQRIEIFENPAEEPDATPYQSVVHDRLQSDLDLHFPGFRLEVQTAYQKNNRKEFEESDEREP-----------------------------GLNLVLKTGTTDIKLHHKPVGN-LFGTVGISGMAQRNQTLAEEKLIPGFVLYNVAGFIYEELKLGSINLSAGFRFDKRKLNTGALLELNVDKQEKNYNALSGNLGIVWRISNPFAFSVNFG 552
R +Q ++F+NP E P +T +Q ++H++ P LE+ +YQ+NNR+E E ++ P GLNL L T T D K HHKP+ N L GT G+S Q N+T E LIP + + NVAGF EELKLGS+ LSAG R DKR L+ +L V +Q KNY A +G+ G+VWRI + +N+G
Sbjct: 324 RREQTQDLFDNPNENPGSTVFQKLLHEKSHFHSFFILPAGNLELDVSYQRNNRREIESKNKLTPIKDVLLDESVDSFEKAFQLYQALGRDKYQGLNLFLDTSTADAKFHHKPIFNILHGTFGVSAFQQTNRTKGTEPLIPSYGIVNVAGFFLEELKLGSLTLSAGIRGDKRSLDVRNNADLGVVEQAKNYYATTGSAGLVWRIEKSVSAVLNYG 537
BLAST of mRNA_M-pyrifera_M_contig115975.3315.1 vs. uniprot
Match: A0A838RBA4_9BACT (TonB-dependent receptor n=2 Tax=Gemmatimonadales bacterium TaxID=2448054 RepID=A0A838RBA4_9BACT) HSP 1 Score: 144 bits (362), Expect = 1.540e-36 Identity = 72/184 (39.13%), Postives = 112/184 (60.87%), Query Frame = 1
Query: 1 RVDQRIEIFENPAEEPDATPYQSVVHDRLQSDLDLHFPGFRLEVQTAYQKNNRKEFEESDEREPGLNLVLKTGTTDIKLHHKPVGNLFGTVGISGMAQRNQTLAEEKLIPGFVLYNVAGFIYEELKLGSINLSAGFRFDKRKLNTGALLELNVDKQEKNYNALSGNLGIVWRISNPFAFSVNFG 552
R D+R+EI E+PAEEP ATP+Q + DR+Q +L +V+ +++N R+EFEE E L L+ +T TTD++LHH PV + G +G++G+ + EE LIP N +++E+ +LG NLS G R+D R+L EL V Q + Y++++GNLG ++R++ P A +N G
Sbjct: 324 RRDERVEIHEDPAEEPGATPFQRIGADRVQVGANLPAGASHFDVELGFERNRRREFEEEGASEVALGLLSRTYTTDVRLHHTPVRGVAGILGVAGLRNAFEKFGEETLIPEHAYNNAGLYVFEQAELGRWNLSVGARYDYRRLVVEDDAELGVVAQRRTYSSITGNLGALYRVAEPLALVLNLG 507 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115975.3315.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig115975.3315.1 >prot_M-pyrifera_M_contig115975.3315.1 ID=prot_M-pyrifera_M_contig115975.3315.1|Name=mRNA_M-pyrifera_M_contig115975.3315.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=184bp RVDQRIEIFENPAEEPDATPYQSVVHDRLQSDLDLHFPGFRLEVQTAYQKback to top mRNA from alignment at M-pyrifera_M_contig115975:8..559+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig115975.3315.1 ID=mRNA_M-pyrifera_M_contig115975.3315.1|Name=mRNA_M-pyrifera_M_contig115975.3315.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=552bp|location=Sequence derived from alignment at M-pyrifera_M_contig115975:8..559+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig115975:8..559+ >mRNA_M-pyrifera_M_contig115975.3315.1 ID=mRNA_M-pyrifera_M_contig115975.3315.1|Name=mRNA_M-pyrifera_M_contig115975.3315.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1104bp|location=Sequence derived from alignment at M-pyrifera_M_contig115975:8..559+ (Macrocystis pyrifera P11B4 male)back to top |