mRNA_M-pyrifera_M_contig115627.3235.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig115627.3235.1 vs. uniprot
Match: A0A356VEA9_9GAMM (GTPase n=10 Tax=Halieaceae TaxID=1706372 RepID=A0A356VEA9_9GAMM) HSP 1 Score: 374 bits (959), Expect = 6.270e-125 Identity = 184/187 (98.40%), Postives = 186/187 (99.47%), Query Frame = 1
Query: 1 SLSRKVINQPMVMPDEPRQLAELSDQLLGLASTAYTLVAVHALRDRDTLVGVNPARLMCEALQRAIDLTAGKIFQHFLLYQPGENRAWQTLHQLYHLAERQHLTRLRVDDGHEGITTVQATWLRPLLLSCCKPNQVRQGDLIAMFRCLLEWGGEAETSEDEEALFAVDIDADQPPTYAKSPRFADQP 561
SLSRKVINQP+VMPDEPRQLAELSDQLLGLASTAYTLVAVHALRDRDTLVGVNPARLMCEALQRAIDLT+GKIFQHFLLYQPGENRAWQTLHQLYHLAERQHLTRLRVDDGHEGITTVQATWLRPLLLSCCKPNQVRQGDLIAMFRCLLEWGGEAETSE EEALFAVDIDADQPPTYAKSPRFADQP
Sbjct: 84 SLSRKVINQPLVMPDEPRQLAELSDQLLGLASTAYTLVAVHALRDRDTLVGVNPARLMCEALQRAIDLTSGKIFQHFLLYQPGENRAWQTLHQLYHLAERQHLTRLRVDDGHEGITTVQATWLRPLLLSCCKPNQVRQGDLIAMFRCLLEWGGEAETSEGEEALFAVDIDADQPPTYAKSPRFADQP 270
BLAST of mRNA_M-pyrifera_M_contig115627.3235.1 vs. uniprot
Match: A0A2E7C356_9GAMM (GTPase n=1 Tax=Haliea sp. TaxID=1932666 RepID=A0A2E7C356_9GAMM) HSP 1 Score: 348 bits (894), Expect = 3.660e-115 Identity = 168/187 (89.84%), Postives = 180/187 (96.26%), Query Frame = 1
Query: 1 SLSRKVINQPMVMPDEPRQLAELSDQLLGLASTAYTLVAVHALRDRDTLVGVNPARLMCEALQRAIDLTAGKIFQHFLLYQPGENRAWQTLHQLYHLAERQHLTRLRVDDGHEGITTVQATWLRPLLLSCCKPNQVRQGDLIAMFRCLLEWGGEAETSEDEEALFAVDIDADQPPTYAKSPRFADQP 561
SL+RKVINQP+VMP+EPRQLAE++DQLLGL+STAYTLVAVHALRDRDT+ GVNPARLMCEALQRAI+LTAGKIFQHFLLYQPGE+RAWQTLHQLYHLAERQHLTRLRVDDG G TTV+ATWLRPLLLSCCKPNQVRQGDLIAMFRCLLEWGGEAE SE E+ALFAVD+DADQPPTYAKSPRFAD P
Sbjct: 82 SLTRKVINQPLVMPEEPRQLAEIADQLLGLSSTAYTLVAVHALRDRDTMAGVNPARLMCEALQRAINLTAGKIFQHFLLYQPGESRAWQTLHQLYHLAERQHLTRLRVDDGDSGTTTVEATWLRPLLLSCCKPNQVRQGDLIAMFRCLLEWGGEAEVSEHEDALFAVDLDADQPPTYAKSPRFADNP 268
BLAST of mRNA_M-pyrifera_M_contig115627.3235.1 vs. uniprot
Match: A0A6C0U497_9GAMM (GTPase n=1 Tax=Kineobactrum salinum TaxID=2708301 RepID=A0A6C0U497_9GAMM) HSP 1 Score: 214 bits (544), Expect = 5.460e-63 Identity = 108/185 (58.38%), Postives = 136/185 (73.51%), Query Frame = 1
Query: 1 SLSRKVINQPMVMPDEPRQLAELSDQLLGLASTAYTLVAVHALRDRDTLVGVNPARLMCEALQRAIDLTAGKIFQHFLLYQPGENRAWQTLHQLYHLAERQHLTRLRVDDGHEGITTVQATWLRPLLLSCCKPNQVRQGDLIAMFRCLLEWGGEAETSEDE--EALFAVDIDADQPPTYAKSPRF 549
+LSR+ +NQP+V+P EP+Q+AEL DQL G AST YT+VA+HA+RDR+ + VNPARL CEA+QRA+ TA +I Q + L+QP +N AWQ LHQLY LAERQHLTRLRVD TT+ AT+L PLLL+CCKPNQ+RQ DL A+ R L +W A D LFAVDI+ DQPP Y+ + R+
Sbjct: 82 TLSRRFLNQPLVLPAEPQQIAELVDQLHGRASTGYTVVAIHAIRDREVIQDVNPARLTCEAVQRALWFTACRIVQTYQLHQPSDNAAWQRLHQLYMLAERQHLTRLRVDAAIAARTTITATYLIPLLLACCKPNQLRQSDLTALVRSLQQWSELATLEPDSITSGLFAVDIEGDQPPAYSSARRW 266
BLAST of mRNA_M-pyrifera_M_contig115627.3235.1 vs. uniprot
Match: A0A2N5Y7A7_9GAMM (Uncharacterized protein n=1 Tax=Kineobactrum sediminis TaxID=1905677 RepID=A0A2N5Y7A7_9GAMM) HSP 1 Score: 207 bits (528), Expect = 1.160e-60 Identity = 103/178 (57.87%), Postives = 130/178 (73.03%), Query Frame = 1
Query: 1 SLSRKVINQPMVMPDEPRQLAELSDQLLGLASTAYTLVAVHALRDRDTLVGVNPARLMCEALQRAIDLTAGKIFQHFLLYQPGENRAWQTLHQLYHLAERQHLTRLRVDDGHEGITTVQATWLRPLLLSCCKPNQVRQGDLIAMFRCLLEWGGEAETSEDEEALFAVDIDADQPPTYA 534
SL R+ INQP+V+P EP+ +A+L++QL A TAYTLVAVHA RDR+++ +NPARL+CEALQRA+ T +IFQ + LYQ E WQTLHQLY AERQ LTR +V TTV AT+L+ LLL+CCKP+Q+RQ DL A+FRCL EW G A S E LF+VD+ +D+PP YA
Sbjct: 82 SLPRRFINQPLVLPAEPQHIADLAEQLFSAAGTAYTLVAVHATRDRESIQNINPARLVCEALQRALCFTGCRIFQRYQLYQTLEPGVWQTLHQLYAFAERQQLTRAQVSGVKGAETTVSATYLKSLLLACCKPSQLRQSDLAAVFRCLEEWSGLASISAAGEGLFSVDLSSDRPPAYA 259
BLAST of mRNA_M-pyrifera_M_contig115627.3235.1 vs. uniprot
Match: A0A2D5FF81_9GAMM (GTPase n=2 Tax=Haliea sp. TaxID=1932666 RepID=A0A2D5FF81_9GAMM) HSP 1 Score: 205 bits (522), Expect = 9.260e-60 Identity = 105/182 (57.69%), Postives = 131/182 (71.98%), Query Frame = 1
Query: 1 SLSRKVINQPMVMPDEPRQLAELSDQLLGLASTAYTLVAVHALRDRDTLVGVNPARLMCEALQRAIDLTAGKIFQHFLLYQPGENRAWQTLHQLYHLAERQHLTRLRVDDGHEGITTVQATWLRPLLLSCCKPNQVRQGDLIAMFRCLLEWGGEAETS--EDEEALFAVDIDADQPPTYAKS 540
+LSR+ +NQP+V+P+EPRQ+A+LSDQL GLA+T YTLVA+HA+RDR ++ G NPARL CEALQRA+ L K Q F LYQ +NRAW TLHQLY LAERQ LT+L V TT+ AT+ PLLL+CCKPNQ+RQ DL A+ R L EW + LFA+D+D+DQPP YA +
Sbjct: 82 TLSRRFLNQPLVLPEEPRQIAQLSDQLYGLAATGYTLVALHAIRDRHSIQGTNPARLACEALQRALCLVGCKQLQAFQLYQDSDNRAWFTLHQLYTLAERQQLTQLPVIGRLGEHTTITATYAAPLLLACCKPNQLRQSDLSAIHRGLREWSHNVRVLPFQPSSGLFAIDLDSDQPPVYAST 263
BLAST of mRNA_M-pyrifera_M_contig115627.3235.1 vs. uniprot
Match: UPI0019D38D3B (GTPase n=1 Tax=Parahaliea mediterranea TaxID=651086 RepID=UPI0019D38D3B) HSP 1 Score: 185 bits (470), Expect = 2.990e-52 Identity = 95/183 (51.91%), Postives = 122/183 (66.67%), Query Frame = 1
Query: 1 SLSRKVINQPMVMPDEPRQLAELSDQLLGLASTAYTLVAVHALRDRDTLVGVNPARLMCEALQRAIDLTAGKIFQHFLLYQPGENRAWQTLHQLYHLAERQHLTRLRVDDGHEGITTVQATWLRPLLLSCCKPNQVRQGDLIAMFRCLLEWGGEAE---TSEDEEALFAVDIDADQPPTYAKS 540
+LSR+ +NQP+V+P+EPRQLAEL++ L STAYTLVAVHA++ R+ L VNPARL CE+LQRAI ++ Q F LYQ E W TLHQLY L ERQ L L V D H T+Q ++L+ LLL CCK NQ+RQ DL+ + R L EW G+ + +EALF +D++ D PP Y S
Sbjct: 82 NLSRRFLNQPLVLPEEPRQLAELAENLYSAFSTAYTLVAVHAIQQREQLGDVNPARLTCESLQRAISFAGRRMLQTFQLYQNVEPGGWLTLHQLYALGERQRLAELPVRDQHNRQVTLQESYLQALLLGCCKANQLRQSDLVGVHRGLQEWSGKVRLLGVEDADEALFMIDLNGDHPPVYNTS 264
BLAST of mRNA_M-pyrifera_M_contig115627.3235.1 vs. uniprot
Match: UPI001A0B63BB (GTPase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI001A0B63BB) HSP 1 Score: 182 bits (461), Expect = 6.650e-51 Identity = 88/180 (48.89%), Postives = 124/180 (68.89%), Query Frame = 1
Query: 1 SLSRKVINQPMVMPDEPRQLAELSDQLLGLASTAYTLVAVHALRDRDTLVGVNPARLMCEALQRAIDLTAGKIFQHFLLYQPGENRAWQTLHQLYHLAERQHLTRLRVDDGHEGITTVQATWLRPLLLSCCKPNQVRQGDLIAMFRCLLEWGG--EAETSEDEEALFAVDIDADQPPTYA 534
++SR+ +NQ +VMP+EPRQ+AEL+D L LA+TAYT+VA H L+ RD++ VNPARL+CEA+ RA+ K+ Q F L+QP + W LHQLY +AERQ + L V+D +G T+ +L+ L+L CCKPNQ+RQ DL A++R L EW G + + + E LF VD+ +DQP Y+
Sbjct: 87 TMSRRFLNQALVMPEEPRQMAELADNLYSLATTAYTIVAAHTLQQRDSIYRVNPARLLCEAIHRAMGFAGKKMLQTFQLHQPVQRYGWLELHQLYAMAERQQIADLPVEDKLDGNRTITTIYLQTLILDCCKPNQLRQSDLAAVYRGLQEWSGLIKLQAARTGEGLFQVDLGSDQPAVYS 266
BLAST of mRNA_M-pyrifera_M_contig115627.3235.1 vs. uniprot
Match: A0A496XE63_9GAMM (GTPase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A496XE63_9GAMM) HSP 1 Score: 180 bits (456), Expect = 3.710e-50 Identity = 91/180 (50.56%), Postives = 123/180 (68.33%), Query Frame = 1
Query: 1 SLSRKVINQPMVMPDEPRQLAELSDQLLGLASTAYTLVAVHALRDRDTLVGVNPARLMCEALQRAIDLTAGKIFQHFLLYQPGENRAWQTLHQLYHLAERQHLTRLRVDDGHEGITTVQATWLRPLLLSCCKPNQVRQGDLIAMFRCLLEWGGEAETSEDEEA--LFAVDIDADQPPTYA 534
+L++ +NQP+VMP+EPRQ+AEL+D L + +TAYT+VA+ A++ RDT+ G+NPARL CEA QRA+ K Q F L+QP E W TLHQLY LAE Q L L V + G T+ AT+L+ LLLSCCKPNQ+ Q D+ A++R L EW A + + LF VD+++DQPP Y+
Sbjct: 87 NLTKCFLNQPLVMPEEPRQMAELADSLYSMVTTAYTIVAIQAIQQRDTIRGINPARLACEATQRALTFAGRKALQTFQLFQPIELHGWLTLHQLYALAESQQLVNLPVANPLSGGDTITATYLQVLLLSCCKPNQLSQNDMSALYRGLREWSKLAIVAAPKSGSGLFVVDLNSDQPPLYS 266
BLAST of mRNA_M-pyrifera_M_contig115627.3235.1 vs. uniprot
Match: A0A2E0YTJ8_9GAMM (Uncharacterized protein n=1 Tax=Halioglobus sp. TaxID=2024834 RepID=A0A2E0YTJ8_9GAMM) HSP 1 Score: 173 bits (439), Expect = 9.490e-48 Identity = 89/180 (49.44%), Postives = 116/180 (64.44%), Query Frame = 1
Query: 1 SLSRKVINQPMVMPDEPRQLAELSDQLLGLASTAYTLVAVHALRDRDTLVGVNPARLMCEALQRAIDLTAGKIFQHFLLYQPGENRAWQTLHQLYHLAERQHLTRLRVDDGHEGITTVQATWLRPLLLSCCKPNQVRQGDLIAMFRCLLEWGGEAETSEDEEA--LFAVDIDADQPPTYA 534
+L ++ INQP+VMPD+PRQLA+L DQLL LA TAY +VAV + RD + +PARL C+ALQ A+ T KI Q F LY+P R W +LHQL+ LAE Q L L V + G T++AT+ + LLL CCKPNQ+RQ D+ +F L W + E LF VD+D+DQPP Y+
Sbjct: 82 NLGKRFINQPLVMPDKPRQLADLCDQLLSLAGTAYAVVAVETIEQRDAIRQTHPARLACQALQHALLYTGRKILQSFQLYRPLHIRGWHSLHQLFALAENQQLADLPVPEPLAGGETIRATYFQALLLGCCKPNQLRQADMATLFTALRNWADKVELVAPGAGTGLFLVDLDSDQPPRYS 261
BLAST of mRNA_M-pyrifera_M_contig115627.3235.1 vs. uniprot
Match: A0A5C8ZZ55_9GAMM (GTPase n=1 Tax=Parahaliea maris TaxID=2716870 RepID=A0A5C8ZZ55_9GAMM) HSP 1 Score: 171 bits (433), Expect = 7.270e-47 Identity = 90/180 (50.00%), Postives = 119/180 (66.11%), Query Frame = 1
Query: 4 LSRKVINQPMVMPDEPRQLAELSDQLLGLASTAYTLVAVHALRDRDTLVGVNPARLMCEALQRAIDLTAGKIFQHFLLYQPGENRAWQTLHQLYHLAERQHLTRLRVDDGHEGITTVQATWLRPLLLSCCKPNQVRQGDLIAMFRCLLE-WGGEAE---TSEDEEALFAVDIDADQPPTY 531
LSR+ +NQP+V+P++ RQLAEL++ LL L ST YTLVA+HA++ VNPARL CEALQRAI+LT ++ Q F LYQP E ++W TLHQLY L ERQ L RL + D H T+ +L+ +L CCKPNQ+RQ DL ++R L E WG + F +D+ +DQPP+Y
Sbjct: 83 LSRRFLNQPLVLPEDARQLAELAESLLSLFSTGYTLVAIHAIQRSSDEHRVNPARLACEALQRAIELTGRRMLQVFQLYQPLEAQSWLTLHQLYALGERQQLARLPIRDQHGRELTLTDAYLQVAVLGCCKPNQLRQTDLAGLYRALQERWGAMLQLQGVGSGANNQFVIDLRSDQPPSY 262 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115627.3235.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig115627.3235.1 >prot_M-pyrifera_M_contig115627.3235.1 ID=prot_M-pyrifera_M_contig115627.3235.1|Name=mRNA_M-pyrifera_M_contig115627.3235.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=177bp MVMPDEPRQLAELSDQLLGLASTAYTLVAVHALRDRDTLVGVNPARLMCEback to top mRNA from alignment at M-pyrifera_M_contig115627:3..563- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig115627.3235.1 ID=mRNA_M-pyrifera_M_contig115627.3235.1|Name=mRNA_M-pyrifera_M_contig115627.3235.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=561bp|location=Sequence derived from alignment at M-pyrifera_M_contig115627:3..563- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig115627:3..563- >mRNA_M-pyrifera_M_contig115627.3235.1 ID=mRNA_M-pyrifera_M_contig115627.3235.1|Name=mRNA_M-pyrifera_M_contig115627.3235.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1062bp|location=Sequence derived from alignment at M-pyrifera_M_contig115627:3..563- (Macrocystis pyrifera P11B4 male)back to top |