mRNA_M-pyrifera_M_contig11558.3225.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig11558.3225.1 vs. uniprot
Match: D8LEE8_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEE8_ECTSI) HSP 1 Score: 284 bits (726), Expect = 1.680e-90 Identity = 147/172 (85.47%), Postives = 154/172 (89.53%), Query Frame = 1
Query: 1 TRENRVLVFALYKREAARLEQFLQRNNYDAVAVHGDKGQADRERALGQFKSKERPLMVATDVAARGLDIPDVEFVINYSFPLTIGDDGXXXXXXXXXXXXXGSHTYFHQGDKARAGELVNVLQDANQTVPEALTKFGTHVKKKEHKLYGAFAKDVDMDKKSTKITFDDSDDE 516
+R+NRVLVFALYKREAARLEQFLQRNN+DAVAVHGDKGQADRERALGQFKSKERPLMVATDVAARGLDIPDVE+VINYSFPLTI D SHTYFHQGDKARAGELVNVLQDANQ+VPEALTKFGTHVKKKEHKLYGAFAKDVDMD+K+TK TFDDSDDE
Sbjct: 413 SRKNRVLVFALYKREAARLEQFLQRNNFDAVAVHGDKGQADRERALGQFKSKERPLMVATDVAARGLDIPDVEYVINYSFPLTIEDYIHRIGRTGRAGKKGVSHTYFHQGDKARAGELVNVLQDANQSVPEALTKFGTHVKKKEHKLYGAFAKDVDMDRKATKTTFDDSDDE 584
BLAST of mRNA_M-pyrifera_M_contig11558.3225.1 vs. uniprot
Match: A0A7S2V5P3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5P3_9STRA) HSP 1 Score: 213 bits (543), Expect = 1.190e-64 Identity = 115/170 (67.65%), Postives = 128/170 (75.29%), Query Frame = 1
Query: 10 NRVLVFALYKREAARLEQFLQRNNYDAVAVHGDKGQADRERALGQFKSKERPLMVATDVAARGLDIPDVEFVINYSFPLTIGDDGXXXXXXXXXXXXXGSHTYFHQGDKARAGELVNVLQDANQTVPEALTKFGTHVKKKEHKLYGAFAKDVDMDKKSTKITF-DDSDDE 516
NRVLVFALYK+EAARLE +QR + A+HGDK Q DRE AL F++ PL+VATDVAARGLDIPDVE+VINYSFPLTI D +HT+FH GDKARAGEL NVL+ A VPE L KFGTHVKKKEHKLYGAF+KDVDM KKSTKITF DDSDD+
Sbjct: 273 NRVLVFALYKKEAARLEAMIQRAGWKVGAIHGDKSQRDREAALADFRACRVPLLVATDVAARGLDIPDVEYVINYSFPLTIEDYVHRIGRTGRAGQKGVAHTFFHAGDKARAGELQNVLRKAGVEVPEELLKFGTHVKKKEHKLYGAFSKDVDMSKKSTKITFSDDSDDD 442
BLAST of mRNA_M-pyrifera_M_contig11558.3225.1 vs. uniprot
Match: A0A024UC09_9STRA (Uncharacterized protein n=10 Tax=Aphanomyces TaxID=100860 RepID=A0A024UC09_9STRA) HSP 1 Score: 215 bits (548), Expect = 1.980e-64 Identity = 110/168 (65.48%), Postives = 128/168 (76.19%), Query Frame = 1
Query: 1 TRENRVLVFALYKREAARLEQFLQRNNYDAVAVHGDKGQADRERALGQFKSKERPLMVATDVAARGLDIPDVEFVINYSFPLTIGDDGXXXXXXXXXXXXXGSHTYFHQGDKARAGELVNVLQDANQTVPEALTKFGTHVKKKEHKLYGAFAKDVDMDKKSTKITFDD 504
+R+NRVLVF LYK+EA R+EQ LQR + A+HGDKGQ R AL FKS + PL++ATDVAARGLDIPDVEFV+NYSFPLTI D SHT+F DK +AGELVN+L+++N TVPE LTKFGTHVKKKEHKLYGAFAKD+DM KK+TKITFDD
Sbjct: 373 SRKNRVLVFVLYKKEAVRVEQMLQRKGWSCTAIHGDKGQQQRMEALDAFKSGQIPLLIATDVAARGLDIPDVEFVLNYSFPLTIEDYVHRIGRTGRGGKKGISHTFFTNFDKPKAGELVNLLRESNATVPEELTKFGTHVKKKEHKLYGAFAKDIDMTKKATKITFDD 540
BLAST of mRNA_M-pyrifera_M_contig11558.3225.1 vs. uniprot
Match: A0A067CYW6_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CYW6_SAPPC) HSP 1 Score: 214 bits (545), Expect = 4.370e-64 Identity = 112/172 (65.12%), Postives = 130/172 (75.58%), Query Frame = 1
Query: 1 TRENRVLVFALYKREAARLEQFLQRNNYDAVAVHGDKGQADRERALGQFKSKERPLMVATDVAARGLDIPDVEFVINYSFPLTIGDDGXXXXXXXXXXXXXGSHTYFHQGDKARAGELVNVLQDANQTVPEALTKFGTHVKKKEHKLYGAFAKDVDMDKKSTKITFDDSDDE 516
+R+NRVLVF LYK+EA R+E LQR + A+HGDKGQA R AL FKS PL++ATDVAARGLDIPDVEFV+NYSFPLTI D SHT+F DK +AGELVN+L+++N VPE LTKFGTHVKKKEHKLYGAFAK+VDM+KK+TKITF DSDDE
Sbjct: 358 SRKNRVLVFVLYKKEAVRVETMLQRKGWKCTAIHGDKGQAQRMEALEAFKSGSIPLLIATDVAARGLDIPDVEFVLNYSFPLTIEDYVHRIGRTGRGGKKGISHTFFTNHDKPKAGELVNLLRESNAPVPEELTKFGTHVKKKEHKLYGAFAKNVDMNKKATKITFGDSDDE 529
BLAST of mRNA_M-pyrifera_M_contig11558.3225.1 vs. uniprot
Match: T0RX20_SAPDV (Uncharacterized protein n=2 Tax=Saprolegniaceae TaxID=4764 RepID=T0RX20_SAPDV) HSP 1 Score: 214 bits (544), Expect = 7.600e-64 Identity = 112/172 (65.12%), Postives = 130/172 (75.58%), Query Frame = 1
Query: 1 TRENRVLVFALYKREAARLEQFLQRNNYDAVAVHGDKGQADRERALGQFKSKERPLMVATDVAARGLDIPDVEFVINYSFPLTIGDDGXXXXXXXXXXXXXGSHTYFHQGDKARAGELVNVLQDANQTVPEALTKFGTHVKKKEHKLYGAFAKDVDMDKKSTKITFDDSDDE 516
+R+NRVLVF LYK+EA R+E LQR + A+HGDKGQA R AL FKS PL++ATDVAARGLDIPDVEFV+NYSFPLTI D SHT+F DK +AGELVN+L+++N VPE LTKFGTHVKKKEHKLYGAFAK+VDM+KK+TKITF DSDDE
Sbjct: 368 SRKNRVLVFVLYKKEAVRVETMLQRKGWKCTAIHGDKGQAQRMEALEAFKSGTIPLLIATDVAARGLDIPDVEFVLNYSFPLTIEDYVHRIGRTGRGGKKGISHTFFTNHDKPKAGELVNLLRESNAPVPEELTKFGTHVKKKEHKLYGAFAKNVDMNKKATKITFGDSDDE 539
BLAST of mRNA_M-pyrifera_M_contig11558.3225.1 vs. uniprot
Match: A0A485L977_9STRA (Aste57867_16705 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L977_9STRA) HSP 1 Score: 211 bits (536), Expect = 1.210e-62 Identity = 108/168 (64.29%), Postives = 126/168 (75.00%), Query Frame = 1
Query: 1 TRENRVLVFALYKREAARLEQFLQRNNYDAVAVHGDKGQADRERALGQFKSKERPLMVATDVAARGLDIPDVEFVINYSFPLTIGDDGXXXXXXXXXXXXXGSHTYFHQGDKARAGELVNVLQDANQTVPEALTKFGTHVKKKEHKLYGAFAKDVDMDKKSTKITFDD 504
+R+NRVLVF LYK+EA R+E LQR + A+HGDK Q DR AL FKS + PL++ATDVAARGLDIPDVEFV+NYSFPLTI D SHT+F DK +AGELVN+L+++N VPE LTKFGTHVKKKEHKLYGAFAKD+DM KK+TKITFDD
Sbjct: 374 SRKNRVLVFVLYKKEAVRVESMLQRKGWACTAIHGDKNQHDRMEALEAFKSGKTPLLIATDVAARGLDIPDVEFVLNYSFPLTIEDYVHRIGRTGRGGKKGTSHTFFTNFDKPKAGELVNLLRESNAPVPEELTKFGTHVKKKEHKLYGAFAKDIDMTKKATKITFDD 541
BLAST of mRNA_M-pyrifera_M_contig11558.3225.1 vs. uniprot
Match: A0A6G0WXV8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WXV8_9STRA) HSP 1 Score: 210 bits (535), Expect = 1.850e-62 Identity = 109/168 (64.88%), Postives = 126/168 (75.00%), Query Frame = 1
Query: 1 TRENRVLVFALYKREAARLEQFLQRNNYDAVAVHGDKGQADRERALGQFKSKERPLMVATDVAARGLDIPDVEFVINYSFPLTIGDDGXXXXXXXXXXXXXGSHTYFHQGDKARAGELVNVLQDANQTVPEALTKFGTHVKKKEHKLYGAFAKDVDMDKKSTKITFDD 504
+R+NRVLVF LYK+EA R+EQ LQR + A+HGDK Q R AL FKS + PL++ATDVAARGLDIPDVEFV+NYSFPLTI D SHT+F DK +AGELVN+L+++N VPE LTKFGTHVKKKEHKLYGAFAKDVDM KK+TKITFDD
Sbjct: 378 SRKNRVLVFVLYKKEAVRVEQMLQRKGWRCTAIHGDKSQEQRMEALEAFKSGKIPLLIATDVAARGLDIPDVEFVLNYSFPLTIEDYVHRIGRTGRGGKKGTSHTFFTNFDKPKAGELVNLLRESNAPVPEELTKFGTHVKKKEHKLYGAFAKDVDMTKKATKITFDD 545
BLAST of mRNA_M-pyrifera_M_contig11558.3225.1 vs. uniprot
Match: A0A1V9YSH1_9STRA (DEAD/DEAH box RNA helicase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YSH1_9STRA) HSP 1 Score: 210 bits (534), Expect = 2.020e-62 Identity = 111/172 (64.53%), Postives = 129/172 (75.00%), Query Frame = 1
Query: 1 TRENRVLVFALYKREAARLEQFLQRNNYDAVAVHGDKGQADRERALGQFKSKERPLMVATDVAARGLDIPDVEFVINYSFPLTIGDDGXXXXXXXXXXXXXGSHTYFHQGDKARAGELVNVLQDANQTVPEALTKFGTHVKKKEHKLYGAFAKDVDMDKKSTKITFDDSDDE 516
+R+NRVLVF LYK+EA R+E L R + A+HGDKGQ R AL FK+ + PL++ATDVAARGLDIPDVEFV+NYSFPLTI D SHT+F DK +AGELVN+L+D+N VPE LTKFGTHVKKKEHKLYGAFAKDVDM+KK+TKITFD SDDE
Sbjct: 363 SRKNRVLVFVLYKKEAVRVETMLNRKGWKCTAIHGDKGQQQRMEALEAFKTGKVPLLIATDVAARGLDIPDVEFVLNYSFPLTIEDYVHRIGRTGRGGKKGTSHTFFTNHDKPKAGELVNLLRDSNAPVPEELTKFGTHVKKKEHKLYGAFAKDVDMNKKATKITFD-SDDE 533
BLAST of mRNA_M-pyrifera_M_contig11558.3225.1 vs. uniprot
Match: A0A5D6YE84_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YE84_9STRA) HSP 1 Score: 209 bits (531), Expect = 1.200e-61 Identity = 106/170 (62.35%), Postives = 130/170 (76.47%), Query Frame = 1
Query: 1 TRENRVLVFALYKREAARLEQFLQRNNYDAVAVHGDKGQADRERALGQFKSKERPLMVATDVAARGLDIPDVEFVINYSFPLTIGDDGXXXXXXXXXXXXXGSHTYFHQGDKARAGELVNVLQDANQTVPEALTKFGTHVKKKEHKLYGAFAKDVDMDKKSTKITFDDSD 510
+R NRVL+F LYK+EA R+E+ LQ+ + A+HGD+ QA R A+ QFKS + PL++ATDVAARGLDIPDVE+V+NYSFPLTI D +HT+F DK RAGELVN+L+D+NQ VP LTKFGTHVKKKEHKLYGAFAK+VD++KK+TKITFDDSD
Sbjct: 402 SRRNRVLLFVLYKKEADRVERMLQQKGWTCAAIHGDRNQAQRTEAVEQFKSGKIPLLIATDVAARGLDIPDVEYVLNYSFPLTIEDYVHRIGRTGRGGKKGTAHTFFTANDKPRAGELVNLLRDSNQEVPADLTKFGTHVKKKEHKLYGAFAKNVDVNKKATKITFDDSD 571
BLAST of mRNA_M-pyrifera_M_contig11558.3225.1 vs. uniprot
Match: A0A7S3XUU1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUU1_HETAK) HSP 1 Score: 207 bits (527), Expect = 4.860e-61 Identity = 109/167 (65.27%), Postives = 124/167 (74.25%), Query Frame = 1
Query: 10 NRVLVFALYKREAARLEQFLQRNNYDAVAVHGDKGQADRERALGQFKSKERPLMVATDVAARGLDIPDVEFVINYSFPLTIGDDGXXXXXXXXXXXXXGSHTYFHQGDKARAGELVNVLQDANQTVPEALTKFGTHVKKKEHKLYGAFAKDVDMDKKSTKITFDDSD 510
NRV+VF LYK+E +RLE L+R + A+HGDKGQ RE AL F+ ++ P+++ATDVAARGLDIPDVE VINYSFPLTI D SHT FH+GDKARAGELVNVL A VP AL KFGTHVKKKEHKLYGAFAKDVD+ KK+TKITFDDSD
Sbjct: 405 NRVIVFGLYKKECSRLEGDLRRAGWKVGAIHGDKGQGAREAALEDFRQQKVPILIATDVAARGLDIPDVEVVINYSFPLTIEDYVHRIGRTGRAGKSGVSHTLFHEGDKARAGELVNVLTKAGAEVPAALLKFGTHVKKKEHKLYGAFAKDVDLTKKATKITFDDSD 571 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11558.3225.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11558.3225.1 >prot_M-pyrifera_M_contig11558.3225.1 ID=prot_M-pyrifera_M_contig11558.3225.1|Name=mRNA_M-pyrifera_M_contig11558.3225.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=173bp TRENRVLVFALYKREAARLEQFLQRNNYDAVAVHGDKGQADRERALGQFKback to top mRNA from alignment at M-pyrifera_M_contig11558:174..2101+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig11558.3225.1 ID=mRNA_M-pyrifera_M_contig11558.3225.1|Name=mRNA_M-pyrifera_M_contig11558.3225.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1928bp|location=Sequence derived from alignment at M-pyrifera_M_contig11558:174..2101+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig11558:174..2101+ >mRNA_M-pyrifera_M_contig11558.3225.1 ID=mRNA_M-pyrifera_M_contig11558.3225.1|Name=mRNA_M-pyrifera_M_contig11558.3225.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1038bp|location=Sequence derived from alignment at M-pyrifera_M_contig11558:174..2101+ (Macrocystis pyrifera P11B4 male)back to top |