mRNA_M-pyrifera_M_contig115111.3142.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig115111.3142.1 vs. uniprot
Match: A0A2E7C858_9GAMM (GDP-mannose 4,6-dehydratase n=1 Tax=Haliea sp. TaxID=1932666 RepID=A0A2E7C858_9GAMM) HSP 1 Score: 306 bits (783), Expect = 7.070e-102 Identity = 153/160 (95.62%), Postives = 156/160 (97.50%), Query Frame = 1
Query: 10 LPKKALITGVTGQDGSYLAELLLDQGYEVHGIKRRASSFNTQRVDHIYQDPHVDNQRFILHYGDLTDSSSLARIIQHVQPDEVYNLAAQSHVAVSFESPEYTADVDAMGTLRILEAIRLLGLEHKTRFYQASTSELYGLVQETPQRESTPFYPRSPYAVA 489
L KALITGVTGQDGSYLAELLLD+GYEVHGIKRRASSFNT+RVDHIYQDPHVDNQRFILHYGDLTDSSSL RIIQHVQPDEVYNL AQSHVAVSFESPEYTADVDAMGTLRILEAIRLLGLEHKTRFYQASTSELYGLVQETPQRESTPF+PRSPYAVA
Sbjct: 2 LAPKALITGVTGQDGSYLAELLLDKGYEVHGIKRRASSFNTRRVDHIYQDPHVDNQRFILHYGDLTDSSSLTRIIQHVQPDEVYNLGAQSHVAVSFESPEYTADVDAMGTLRILEAIRLLGLEHKTRFYQASTSELYGLVQETPQRESTPFHPRSPYAVA 161
BLAST of mRNA_M-pyrifera_M_contig115111.3142.1 vs. uniprot
Match: A0A3C0B486_9BACT (GDP-mannose 4,6-dehydratase (Fragment) n=2 Tax=Bacteria TaxID=2 RepID=A0A3C0B486_9BACT) HSP 1 Score: 290 bits (742), Expect = 2.080e-98 Identity = 142/158 (89.87%), Postives = 151/158 (95.57%), Query Frame = 1
Query: 16 KKALITGVTGQDGSYLAELLLDQGYEVHGIKRRASSFNTQRVDHIYQDPHVDNQRFILHYGDLTDSSSLARIIQHVQPDEVYNLAAQSHVAVSFESPEYTADVDAMGTLRILEAIRLLGLEHKTRFYQASTSELYGLVQETPQRESTPFYPRSPYAVA 489
KKALITG+TGQDGSYLAE LL++GY+VHGIKRRASSFNTQRVDHIYQDPHVDNQ FILHYGDLTDSS+L RI+Q VQPDEVYNL AQSHVAVSFESPEYTADVDAMGTLR+LEAIRLLGLE KTRFYQASTSELYGLVQE PQ+E+TPFYPRSPYAVA
Sbjct: 3 KKALITGITGQDGSYLAEFLLEKGYQVHGIKRRASSFNTQRVDHIYQDPHVDNQNFILHYGDLTDSSNLTRILQEVQPDEVYNLGAQSHVAVSFESPEYTADVDAMGTLRLLEAIRLLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVA 160
BLAST of mRNA_M-pyrifera_M_contig115111.3142.1 vs. uniprot
Match: UPI000F0BC16C (GDP-mannose 4,6-dehydratase n=1 Tax=Haliea alexandrii TaxID=2448162 RepID=UPI000F0BC16C) HSP 1 Score: 296 bits (759), Expect = 2.980e-98 Identity = 148/158 (93.67%), Postives = 152/158 (96.20%), Query Frame = 1
Query: 16 KKALITGVTGQDGSYLAELLLDQGYEVHGIKRRASSFNTQRVDHIYQDPHVDNQRFILHYGDLTDSSSLARIIQHVQPDEVYNLAAQSHVAVSFESPEYTADVDAMGTLRILEAIRLLGLEHKTRFYQASTSELYGLVQETPQRESTPFYPRSPYAVA 489
+KALITGVTGQDGSYLAE LLD+GYEVHGIKRRAS FNTQRVDHIYQDPHVDNQRFILHYGDLTDSSSL RIIQ VQPDEVYNL AQSHVAVSFESPEYTADVDAMGTLRILEAIRLLGLE KTRFYQASTSELYGLV+ETPQRE+TPFYPRSPYAVA
Sbjct: 3 RKALITGVTGQDGSYLAEFLLDKGYEVHGIKRRASLFNTQRVDHIYQDPHVDNQRFILHYGDLTDSSSLTRIIQQVQPDEVYNLGAQSHVAVSFESPEYTADVDAMGTLRILEAIRLLGLERKTRFYQASTSELYGLVRETPQRETTPFYPRSPYAVA 160
BLAST of mRNA_M-pyrifera_M_contig115111.3142.1 vs. uniprot
Match: A0A5E6PYX1_PSEFL (GDP-mannose 4,6-dehydratase n=27 Tax=Bacteria TaxID=2 RepID=A0A5E6PYX1_PSEFL) HSP 1 Score: 295 bits (756), Expect = 8.770e-98 Identity = 146/158 (92.41%), Postives = 154/158 (97.47%), Query Frame = 1
Query: 16 KKALITGVTGQDGSYLAELLLDQGYEVHGIKRRASSFNTQRVDHIYQDPHVDNQRFILHYGDLTDSSSLARIIQHVQPDEVYNLAAQSHVAVSFESPEYTADVDAMGTLRILEAIRLLGLEHKTRFYQASTSELYGLVQETPQRESTPFYPRSPYAVA 489
KKALITG+TGQDGSYLAELLL++GYEVHGIKRRASSFNTQRVDHIYQDPHVDNQRFILHYGDL+DSS+L RII+ VQPDEVYNL AQSHVAVSFESPEYTADVDAMGTLRILEAIRLLGLE KTRFYQASTSELYGLVQETPQ+E+TPFYPRSPYAVA
Sbjct: 4 KKALITGITGQDGSYLAELLLEKGYEVHGIKRRASSFNTQRVDHIYQDPHVDNQRFILHYGDLSDSSNLTRIIKEVQPDEVYNLGAQSHVAVSFESPEYTADVDAMGTLRILEAIRLLGLEKKTRFYQASTSELYGLVQETPQKETTPFYPRSPYAVA 161
BLAST of mRNA_M-pyrifera_M_contig115111.3142.1 vs. uniprot
Match: A0A379PLH8_PSEOL (GDP-mannose 4,6-dehydratase n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A379PLH8_PSEOL) HSP 1 Score: 290 bits (743), Expect = 9.630e-98 Identity = 143/160 (89.38%), Postives = 152/160 (95.00%), Query Frame = 1
Query: 10 LPKKALITGVTGQDGSYLAELLLDQGYEVHGIKRRASSFNTQRVDHIYQDPHVDNQRFILHYGDLTDSSSLARIIQHVQPDEVYNLAAQSHVAVSFESPEYTADVDAMGTLRILEAIRLLGLEHKTRFYQASTSELYGLVQETPQRESTPFYPRSPYAVA 489
+ K+ALITG+TGQDGSYLAE LL++GYEVHGIKRRASSFNTQRVDHIYQDPHVDNQ FILHYGDL+DSS+L RIIQ VQPDEVYNL AQSHVAVSFESPEYTADVDAMGTLRILEAIRLLGLE KTRFYQASTSELYGLVQE PQ+E+TPFYPRSPYAVA
Sbjct: 1 MTKRALITGITGQDGSYLAEFLLEKGYEVHGIKRRASSFNTQRVDHIYQDPHVDNQNFILHYGDLSDSSNLTRIIQQVQPDEVYNLGAQSHVAVSFESPEYTADVDAMGTLRILEAIRLLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVA 160
BLAST of mRNA_M-pyrifera_M_contig115111.3142.1 vs. uniprot
Match: UPI00040CBCDA (GDP-mannose 4,6-dehydratase n=1 Tax=Marinospirillum minutulum TaxID=64974 RepID=UPI00040CBCDA) HSP 1 Score: 295 bits (755), Expect = 1.170e-97 Identity = 146/158 (92.41%), Postives = 153/158 (96.84%), Query Frame = 1
Query: 16 KKALITGVTGQDGSYLAELLLDQGYEVHGIKRRASSFNTQRVDHIYQDPHVDNQRFILHYGDLTDSSSLARIIQHVQPDEVYNLAAQSHVAVSFESPEYTADVDAMGTLRILEAIRLLGLEHKTRFYQASTSELYGLVQETPQRESTPFYPRSPYAVA 489
KKALITGVTGQDGSYLAELLL++GY+VHGIKRRASSFNTQRVDHIYQDPHVDNQ FILHYGDLTDSS+L RI+Q VQPDEVYNL AQSHVAVSFESPEYTADVDAMGTLRILEAIRLLGLE KTRFYQASTSELYGLVQETPQ+E+TPFYPRSPYAVA
Sbjct: 2 KKALITGVTGQDGSYLAELLLEKGYQVHGIKRRASSFNTQRVDHIYQDPHVDNQNFILHYGDLTDSSNLTRILQEVQPDEVYNLGAQSHVAVSFESPEYTADVDAMGTLRILEAIRLLGLEKKTRFYQASTSELYGLVQETPQKETTPFYPRSPYAVA 159
BLAST of mRNA_M-pyrifera_M_contig115111.3142.1 vs. uniprot
Match: A0A2E4NM77_9PROT (GDP-mannose 4,6-dehydratase n=3 Tax=Proteobacteria TaxID=1224 RepID=A0A2E4NM77_9PROT) HSP 1 Score: 295 bits (754), Expect = 1.760e-97 Identity = 146/160 (91.25%), Postives = 152/160 (95.00%), Query Frame = 1
Query: 10 LPKKALITGVTGQDGSYLAELLLDQGYEVHGIKRRASSFNTQRVDHIYQDPHVDNQRFILHYGDLTDSSSLARIIQHVQPDEVYNLAAQSHVAVSFESPEYTADVDAMGTLRILEAIRLLGLEHKTRFYQASTSELYGLVQETPQRESTPFYPRSPYAVA 489
+ KKALITG+TGQDGSYLAE LLD+GYEVHGIKRRASSFNTQRVDHIYQDPHVDNQ FILHYGDLTDSS+L RIIQ VQPDEVYNL AQSHVAVSFESPEYTADVDAMGTLRILEAIRLLGLE KTRFYQASTSELYGLVQE PQ+E+TPFYPRSPYAVA
Sbjct: 2 IKKKALITGITGQDGSYLAEFLLDKGYEVHGIKRRASSFNTQRVDHIYQDPHVDNQNFILHYGDLTDSSNLTRIIQEVQPDEVYNLGAQSHVAVSFESPEYTADVDAMGTLRILEAIRLLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVA 161
BLAST of mRNA_M-pyrifera_M_contig115111.3142.1 vs. uniprot
Match: A0A2J7UEX9_9PSED (GDP-mannose 4,6-dehydratase n=2 Tax=Pseudomonas TaxID=286 RepID=A0A2J7UEX9_9PSED) HSP 1 Score: 293 bits (749), Expect = 1.010e-96 Identity = 145/158 (91.77%), Postives = 152/158 (96.20%), Query Frame = 1
Query: 16 KKALITGVTGQDGSYLAELLLDQGYEVHGIKRRASSFNTQRVDHIYQDPHVDNQRFILHYGDLTDSSSLARIIQHVQPDEVYNLAAQSHVAVSFESPEYTADVDAMGTLRILEAIRLLGLEHKTRFYQASTSELYGLVQETPQRESTPFYPRSPYAVA 489
KKALITG+TGQDGSYLAE LL++GYEVHGIKRRASSFNTQRVDHIYQDPHVD+QRFILHYGDLTDSS+L RIIQ V+PDEVYNL AQSHVAVSFESPEYTADVDAMGTLRILEAIRLLGLE KTRFYQASTSELYGLVQE PQRE+TPFYPRSPYAVA
Sbjct: 4 KKALITGITGQDGSYLAEFLLEKGYEVHGIKRRASSFNTQRVDHIYQDPHVDDQRFILHYGDLTDSSNLTRIIQEVKPDEVYNLGAQSHVAVSFESPEYTADVDAMGTLRILEAIRLLGLEKKTRFYQASTSELYGLVQEVPQRETTPFYPRSPYAVA 161
BLAST of mRNA_M-pyrifera_M_contig115111.3142.1 vs. uniprot
Match: A0A1F4K1P6_9BURK (GDP-mannose 4,6-dehydratase n=1 Tax=Burkholderiales bacterium RIFCSPLOWO2_12_FULL_61_40 TaxID=1797566 RepID=A0A1F4K1P6_9BURK) HSP 1 Score: 293 bits (749), Expect = 1.300e-96 Identity = 142/163 (87.12%), Postives = 153/163 (93.87%), Query Frame = 1
Query: 1 PNTLPKKALITGVTGQDGSYLAELLLDQGYEVHGIKRRASSFNTQRVDHIYQDPHVDNQRFILHYGDLTDSSSLARIIQHVQPDEVYNLAAQSHVAVSFESPEYTADVDAMGTLRILEAIRLLGLEHKTRFYQASTSELYGLVQETPQRESTPFYPRSPYAVA 489
P++ PK ALITG+TGQDGSYLAELLLD+GYEVHGIKRRASSFNT R+DHIYQDPH+DN RF LHYGDLTD+S+L RIIQ VQPDEVYNL AQSHVAVSFESPEYTADVD MGTLR+LEAIR+LGLE KTRFYQASTSELYGLVQETPQRE+TPFYPRSPYAVA
Sbjct: 7 PSSSPKVALITGITGQDGSYLAELLLDKGYEVHGIKRRASSFNTDRIDHIYQDPHIDNARFTLHYGDLTDTSNLTRIIQQVQPDEVYNLGAQSHVAVSFESPEYTADVDGMGTLRLLEAIRILGLEKKTRFYQASTSELYGLVQETPQRETTPFYPRSPYAVA 169
BLAST of mRNA_M-pyrifera_M_contig115111.3142.1 vs. uniprot
Match: A0A550GDV2_9PSED (GDP-mannose 4,6-dehydratase n=1 Tax=Pseudomonas sp. ALS1279 TaxID=1734450 RepID=A0A550GDV2_9PSED) HSP 1 Score: 292 bits (748), Expect = 1.390e-96 Identity = 144/160 (90.00%), Postives = 154/160 (96.25%), Query Frame = 1
Query: 10 LPKKALITGVTGQDGSYLAELLLDQGYEVHGIKRRASSFNTQRVDHIYQDPHVDNQRFILHYGDLTDSSSLARIIQHVQPDEVYNLAAQSHVAVSFESPEYTADVDAMGTLRILEAIRLLGLEHKTRFYQASTSELYGLVQETPQRESTPFYPRSPYAVA 489
+ K ALITG+TGQDGSYLAELLL++GYEVHGIKRRASSFNTQRVDHI+QDPHVDNQRFILHYGDL+DSSSL RIIQ +QPDEVYNL AQSHVAVSFE+PEYTADVDAMGTLRILEAIRLLGLE KTRFYQASTSELYGLVQETPQ+E+TPFYPRSPYAVA
Sbjct: 1 MSKIALITGITGQDGSYLAELLLEKGYEVHGIKRRASSFNTQRVDHIFQDPHVDNQRFILHYGDLSDSSSLTRIIQQIQPDEVYNLGAQSHVAVSFEAPEYTADVDAMGTLRILEAIRLLGLEKKTRFYQASTSELYGLVQETPQKETTPFYPRSPYAVA 160 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115111.3142.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig115111.3142.1 >prot_M-pyrifera_M_contig115111.3142.1 ID=prot_M-pyrifera_M_contig115111.3142.1|Name=mRNA_M-pyrifera_M_contig115111.3142.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=163bp PNTLPKKALITGVTGQDGSYLAELLLDQGYEVHGIKRRASSFNTQRVDHIback to top mRNA from alignment at M-pyrifera_M_contig115111:78..566+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig115111.3142.1 ID=mRNA_M-pyrifera_M_contig115111.3142.1|Name=mRNA_M-pyrifera_M_contig115111.3142.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=489bp|location=Sequence derived from alignment at M-pyrifera_M_contig115111:78..566+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig115111:78..566+ >mRNA_M-pyrifera_M_contig115111.3142.1 ID=mRNA_M-pyrifera_M_contig115111.3142.1|Name=mRNA_M-pyrifera_M_contig115111.3142.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=978bp|location=Sequence derived from alignment at M-pyrifera_M_contig115111:78..566+ (Macrocystis pyrifera P11B4 male)back to top |