mRNA_M-pyrifera_M_contig115045.3129.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig115045.3129.1
Unique NamemRNA_M-pyrifera_M_contig115045.3129.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig115045.3129.1 vs. uniprot
Match: A0A2D6CLZ2_9GAMM (Divalent-cation tolerance protein CutA n=1 Tax=Acidiferrobacteraceae bacterium TaxID=2024893 RepID=A0A2D6CLZ2_9GAMM)

HSP 1 Score: 115 bits (288), Expect = 5.640e-31
Identity = 62/106 (58.49%), Postives = 73/106 (68.87%), Query Frame = 1
Query:   40 RVGFVTAGGKEEARKIASALVDERLVACVNIIPGVESVYEWEGKVEMGEEVLMMLKTTKEKEEELTNRIRALHSYDEPEVIFTSIQGGSGSYLDWVRTQTRLPKIE 357
            RV  VTAG  EEA KIA ALV+ERL ACVNIIPGV S+Y W+GKVE   EVLM++KT  +   +L  R+RA+HSY+ PEVI   I  GSG YLDW+     LP  E
Sbjct:    8 RVALVTAGSDEEAAKIARALVEERLAACVNIIPGVRSIYRWQGKVEDDREVLMVIKTDXDALNDLEERVRAIHSYEVPEVIALRIDQGSGPYLDWLAGSV-LPSSE 112          
BLAST of mRNA_M-pyrifera_M_contig115045.3129.1 vs. uniprot
Match: A0A7C2F461_9BACT (Divalent-cation tolerance protein CutA n=1 Tax=Blastocatellia bacterium TaxID=2052146 RepID=A0A7C2F461_9BACT)

HSP 1 Score: 112 bits (280), Expect = 8.000e-30
Identity = 58/103 (56.31%), Postives = 73/103 (70.87%), Query Frame = 1
Query:   31 DGVRVGFVTAGGKEEARKIASALVDERLVACVNIIPGVESVYEWEGKVEMGEEVLMMLKTTKEKEEELTNRIRALHSYDEPEVIFTSIQGGSGSYLDWVRTQT 339
            +G  + FVTA G EEA K+A A+V+ERL ACVNI+ GVES+Y WEGKV    EVLM++K+T E+  EL  RI+ LHSY  PEV+   I+ GS  YLDW+R  T
Sbjct:    2 NGELIVFVTAPGAEEAAKMAEAVVEERLAACVNIVGGVESIYRWEGKVTRDREVLMIIKSTAERYAELERRIKELHSYTTPEVVAIEIERGSKPYLDWLRDST 104          
BLAST of mRNA_M-pyrifera_M_contig115045.3129.1 vs. uniprot
Match: A0A1B3W5R3_9GAMM (Cation tolerance protein CutA n=1 Tax=Luteimonas sp. JM171 TaxID=1896164 RepID=A0A1B3W5R3_9GAMM)

HSP 1 Score: 111 bits (278), Expect = 1.860e-29
Identity = 55/97 (56.70%), Postives = 70/97 (72.16%), Query Frame = 1
Query:   49 FVTAGGKEEARKIASALVDERLVACVNIIPGVESVYEWEGKVEMGEEVLMMLKTTKEKEEELTNRIRALHSYDEPEVIFTSIQGGSGSYLDWVRTQT 339
             +TA  +E A +IA ALVDERL ACVNI+PG+ SVY WEG VE GEEVL+M KT + + + LT RI+ LH YD PEVI   ++GG  +YLDW+  +T
Sbjct:   10 LITAPDREAADRIARALVDERLAACVNILPGITSVYRWEGAVETGEEVLLMAKTMRARLDALTVRIKQLHPYDVPEVIAVGVEGGLPAYLDWIAAET 106          
BLAST of mRNA_M-pyrifera_M_contig115045.3129.1 vs. uniprot
Match: A0A2A9MG92_9APIC (Divalent cation tolerance protein, CutA1 family protein n=1 Tax=Besnoitia besnoiti TaxID=94643 RepID=A0A2A9MG92_9APIC)

HSP 1 Score: 114 bits (286), Expect = 3.410e-29
Identity = 56/104 (53.85%), Postives = 74/104 (71.15%), Query Frame = 1
Query:   31 DGVRVGFVTAGGKEEARKIASALVDERLVACVNIIPGVESVYEWEGKVEMGEEVLMMLKTTKEKEEELTNRIRALHSYDEPEVIFTSIQGGSGSYLDWVRTQTR 342
            D ++V +VT   K +A ++AS LV  RL ACVNI+PG+ SVYEWEGK++  EEVL+++KT KE   EL   +R LHSYD PEV+F  + GG+  YLDWVR  T+
Sbjct:  132 DQIQVAYVTCKDKTQAEEVASKLVASRLAACVNIVPGITSVYEWEGKMQKDEEVLLIVKTRKEFAAELVAAVRQLHSYDVPEVVFLDVVGGNEPYLDWVRRNTQ 235          
BLAST of mRNA_M-pyrifera_M_contig115045.3129.1 vs. uniprot
Match: A0A2C6KV22_9APIC (Divalent cation tolerance 1 family protein n=1 Tax=Cystoisospora suis TaxID=483139 RepID=A0A2C6KV22_9APIC)

HSP 1 Score: 115 bits (288), Expect = 2.030e-28
Identity = 55/101 (54.46%), Postives = 73/101 (72.28%), Query Frame = 1
Query:   40 RVGFVTAGGKEEARKIASALVDERLVACVNIIPGVESVYEWEGKVEMGEEVLMMLKTTKEKEEELTNRIRALHSYDEPEVIFTSIQGGSGSYLDWVRTQTR 342
            R+ +VT   K++  +IA  LV  RL ACVNI+PG+ S+YEWEG++E  EEVL+++KT +E E E+   +R LHSYD PEVIF  I GG+ +YLDWVR  TR
Sbjct:  263 RMAYVTCKDKQQGSEIAEKLVTARLAACVNIVPGITSIYEWEGQIEKDEEVLLIIKTKRELEGEVIKAVRQLHSYDVPEVIFVDIVGGNDAYLDWVRKNTR 363          
BLAST of mRNA_M-pyrifera_M_contig115045.3129.1 vs. uniprot
Match: V4ZAX0_TOXGV (CutA1 divalent ion tolerance domain-containing protein n=15 Tax=Toxoplasma gondii TaxID=5811 RepID=V4ZAX0_TOXGV)

HSP 1 Score: 112 bits (281), Expect = 2.810e-28
Identity = 54/102 (52.94%), Postives = 73/102 (71.57%), Query Frame = 1
Query:   37 VRVGFVTAGGKEEARKIASALVDERLVACVNIIPGVESVYEWEGKVEMGEEVLMMLKTTKEKEEELTNRIRALHSYDEPEVIFTSIQGGSGSYLDWVRTQTR 342
            V+V +VT   K +A ++AS LV+ RL ACVNI+PG+ S+YEWEGK+E  EEVL+++KT KE   E+   +R  HSYD PEVIF  + GG+  YLDWV+  T+
Sbjct:  151 VQVAYVTCKDKTQAEEVASKLVENRLAACVNIVPGITSIYEWEGKMEKDEEVLLIVKTRKELAAEVVAAVRKWHSYDVPEVIFLDVAGGNEPYLDWVKRNTQ 252          
BLAST of mRNA_M-pyrifera_M_contig115045.3129.1 vs. uniprot
Match: A0A2V9QG76_9BACT (Divalent-cation tolerance protein CutA n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9QG76_9BACT)

HSP 1 Score: 108 bits (269), Expect = 3.640e-28
Identity = 54/96 (56.25%), Postives = 70/96 (72.92%), Query Frame = 1
Query:   55 TAGGKEEARKIASALVDERLVACVNIIPGVESVYEWEGKVEMGEEVLMMLKTTKEKEEELTNRIRALHSYDEPEVIFTSIQGGSGSYLDWVRTQTR 342
            TAG +EEA KIA+ALV+ RL ACVNIIP ++SVY WEGKVE  EE L+++KT K ++EE+ + IR LHSY+ PE I  SI+ G+  YL W+    R
Sbjct:   10 TAGSQEEANKIATALVERRLAACVNIIPRIQSVYRWEGKVESAEEFLLVIKTVKARQEEVQSAIRKLHSYELPEFIAISIERGTADYLAWIEECVR 105          
BLAST of mRNA_M-pyrifera_M_contig115045.3129.1 vs. uniprot
Match: A0A7J7PWS2_9CHLO (Uncharacterized protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PWS2_9CHLO)

HSP 1 Score: 108 bits (270), Expect = 4.570e-28
Identity = 56/102 (54.90%), Postives = 71/102 (69.61%), Query Frame = 1
Query:   34 GVRVGFVTAGGKEEARKIASALVDERLVACVNIIPGVESVYEWEGKVEMGEEVLMMLKTTKEKEEELTNRIRALHSYDEPEVIFTSIQGGSGSYLDWVRTQT 339
            G+ V +VTA   + A  +A+ALVD +L ACVNI+PGV SVY W+GKVE   EVLMM+KT     E LT +++ALH YDEPEVI   + GGS SY+ W+R  T
Sbjct:   19 GILVVYVTAPSADVAGSLAAALVDRQLAACVNILPGVTSVYSWKGKVEKDSEVLMMIKTQAHLLERLTAQVKALHPYDEPEVIALPVVGGSASYMAWLRDST 120          
BLAST of mRNA_M-pyrifera_M_contig115045.3129.1 vs. uniprot
Match: A0A0F9GRH8_9ZZZZ (Uncharacterized protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9GRH8_9ZZZZ)

HSP 1 Score: 107 bits (267), Expect = 7.540e-28
Identity = 52/98 (53.06%), Postives = 66/98 (67.35%), Query Frame = 1
Query:   49 FVTAGGKEEARKIASALVDERLVACVNIIPGVESVYEWEGKVEMGEEVLMMLKTTKEKEEELTNRIRALHSYDEPEVIFTSIQGGSGSYLDWVRTQTR 342
             VTA G+EEA  I  ALVDERL AC NI+P + S+Y WEGKV+   E LM++KTT +K EELT R++ LHSY  PE+I   I  G+  YL W+   T+
Sbjct:    7 IVTASGEEEAASIGRALVDERLAACANIVPKIRSIYRWEGKVQDDPEALMLIKTTDDKFEELTARVKELHSYSVPEIIALPIGAGASDYLSWIEESTK 104          
BLAST of mRNA_M-pyrifera_M_contig115045.3129.1 vs. uniprot
Match: UPI0019ABDB09 (Divalent-cation tolerance protein CutA n=1 Tax=Pyrinomonadaceae bacterium TaxID=2283092 RepID=UPI0019ABDB09)

HSP 1 Score: 105 bits (261), Expect = 7.940e-27
Identity = 50/94 (53.19%), Postives = 69/94 (73.40%), Query Frame = 1
Query:   49 FVTAGGKEEARKIASALVDERLVACVNIIPGVESVYEWEGKVEMGEEVLMMLKTTKEKEEELTNRIRALHSYDEPEVIFTSIQGGSGSYLDWVR 330
            F+TAG ++EA ++A  LV+  L ACV I+PGVESVY W+G+VE  EEVL+++KT + K  EL   +RALHSY+ PE++   I  GSG YL+W+R
Sbjct:   12 FITAGNRDEAVRLAEMLVEAGLAACVQILPGVESVYRWQGQVERQEEVLLLVKTLRSKFAELVREVRALHSYETPEIVGVPIALGSGPYLEWLR 105          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115045.3129.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D6CLZ2_9GAMM5.640e-3158.49Divalent-cation tolerance protein CutA n=1 Tax=Aci... [more]
A0A7C2F461_9BACT8.000e-3056.31Divalent-cation tolerance protein CutA n=1 Tax=Bla... [more]
A0A1B3W5R3_9GAMM1.860e-2956.70Cation tolerance protein CutA n=1 Tax=Luteimonas s... [more]
A0A2A9MG92_9APIC3.410e-2953.85Divalent cation tolerance protein, CutA1 family pr... [more]
A0A2C6KV22_9APIC2.030e-2854.46Divalent cation tolerance 1 family protein n=1 Tax... [more]
V4ZAX0_TOXGV2.810e-2852.94CutA1 divalent ion tolerance domain-containing pro... [more]
A0A2V9QG76_9BACT3.640e-2856.25Divalent-cation tolerance protein CutA n=1 Tax=Aci... [more]
A0A7J7PWS2_9CHLO4.570e-2854.90Uncharacterized protein n=1 Tax=Scenedesmus sp. NR... [more]
A0A0F9GRH8_9ZZZZ7.540e-2853.06Uncharacterized protein n=1 Tax=marine sediment me... [more]
UPI0019ABDB097.940e-2753.19Divalent-cation tolerance protein CutA n=1 Tax=Pyr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig115045contigM-pyrifera_M_contig115045:53..421 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeApicomplexa
Seed ortholog score115.9
Seed ortholog evalue1.3e-23
Seed eggNOG ortholog99158.XP_008881866.1
KEGG koko:K03926
Hectar predicted targeting categoryother localisation
EggNOG free text desc.CutA1 divalent ion tolerance protein
EggNOG OGs3YASR@5794,3YPHV@5796,3YVJ2@5809,COG1324@1,KOG3338@2759
COG Functional cat.P
Best tax levelSarcocystidae
Best eggNOG OGNA|NA|NA
BRITEko00000
Exons1
Model size369
Cds size369
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815666.5870392-CDS-M-pyrifera_M_contig115045:52..4211622815666.5870392-CDS-M-pyrifera_M_contig115045:52..421Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig115045 53..421 -
1692277512.300109-CDS-M-pyrifera_M_contig115045:52..4211692277512.300109-CDS-M-pyrifera_M_contig115045:52..421Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig115045 53..421 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig115045.3129.1prot_M-pyrifera_M_contig115045.3129.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig115045 53..421 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig115045.3129.1

>prot_M-pyrifera_M_contig115045.3129.1 ID=prot_M-pyrifera_M_contig115045.3129.1|Name=mRNA_M-pyrifera_M_contig115045.3129.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=123bp
MYEGEEAAKGDGVRVGFVTAGGKEEARKIASALVDERLVACVNIIPGVES
VYEWEGKVEMGEEVLMMLKTTKEKEEELTNRIRALHSYDEPEVIFTSIQG
GSGSYLDWVRTQTRLPKIERSE*
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mRNA from alignment at M-pyrifera_M_contig115045:53..421-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig115045.3129.1 ID=mRNA_M-pyrifera_M_contig115045.3129.1|Name=mRNA_M-pyrifera_M_contig115045.3129.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=369bp|location=Sequence derived from alignment at M-pyrifera_M_contig115045:53..421- (Macrocystis pyrifera P11B4 male)
ATGTATGAGGGCGAGGAGGCGGCAAAAGGAGATGGAGTGCGAGTAGGGTT TGTGACAGCGGGTGGGAAAGAGGAGGCTCGGAAGATTGCGTCAGCTTTAG TGGATGAGAGACTGGTGGCTTGTGTGAACATCATTCCTGGGGTGGAGAGT GTGTATGAGTGGGAGGGCAAGGTGGAGATGGGGGAAGAAGTACTCATGAT GCTCAAGACGACGAAGGAGAAAGAAGAAGAGCTTACGAATAGAATCAGAG CCCTACACTCCTACGATGAGCCAGAAGTGATTTTTACATCTATTCAAGGG GGTAGTGGGAGTTACTTGGACTGGGTCAGGACACAAACAAGACTGCCAAA GATTGAAAGAAGCGAGTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig115045:53..421-

>mRNA_M-pyrifera_M_contig115045.3129.1 ID=mRNA_M-pyrifera_M_contig115045.3129.1|Name=mRNA_M-pyrifera_M_contig115045.3129.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=738bp|location=Sequence derived from alignment at M-pyrifera_M_contig115045:53..421- (Macrocystis pyrifera P11B4 male)
ATGTATGAGGGCGAGGAGGCGGCAAAAGGAGATGGAGTGCGAGTAGGGTT
TGTGACAGCGGGTGGGAAAGAGGAGGCTCGGAAGATTGCGTCAGCTTTAG
TGGATGAGAGACTGGTGGCTTGTGTGAACATCATTCCTGGGGTGGAGAGT
GTGTATGAGTGGGAGGGCAAGGTGGAGATGGGGGAAGAAGTACTCATGAT
GCTCAAGACGACGAAGGAGAAAGAAGAAGAGCTTACGAATAGAATCAGAG
CCCTACACTCCTACGATGAGCCAGAAGTGATTTTTACATCTATTCAAGGG
GGTAGTGGGAGTTACTTGGACTGGGTCAGGACACAAACAAGACTGCCAAA
GATTGAAAGAAGCGAGTAAATGTATGAGGGCGAGGAGGCGGCAAAAGGAG
ATGGAGTGCGAGTAGGGTTTGTGACAGCGGGTGGGAAAGAGGAGGCTCGG
AAGATTGCGTCAGCTTTAGTGGATGAGAGACTGGTGGCTTGTGTGAACAT
CATTCCTGGGGTGGAGAGTGTGTATGAGTGGGAGGGCAAGGTGGAGATGG
GGGAAGAAGTACTCATGATGCTCAAGACGACGAAGGAGAAAGAAGAAGAG
CTTACGAATAGAATCAGAGCCCTACACTCCTACGATGAGCCAGAAGTGAT
TTTTACATCTATTCAAGGGGGTAGTGGGAGTTACTTGGACTGGGTCAGGA
CACAAACAAGACTGCCAAAGATTGAAAGAAGCGAGTAA
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