mRNA_M-pyrifera_M_contig114955.3103.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig114955.3103.1 vs. uniprot
Match: A0A6L8I3I3_9RHOB (Extracellular solute-binding protein n=3 Tax=unclassified Boseongicola TaxID=2634418 RepID=A0A6L8I3I3_9RHOB) HSP 1 Score: 227 bits (578), Expect = 9.700e-71 Identity = 104/123 (84.55%), Postives = 114/123 (92.68%), Query Frame = 1
Query: 1 TGGFAAGIPANAPNKEAAFLFLQYITSKKGDQRMVELGGDPVRISTLQNNADKFDEYSVVAEQLPCADPDWRPLIPEWNELNIDVLGQALTEVITTDKPIQPIMDAANEKARAIMEREGYYVW 369
TGGFA GIPANAPN+EAAFLF+QY+T+K GDQRMVELGGDPVRISTLQNN + FD+Y +VAEQLPCADPDWRPLIPEWNE+NIDVLGQALT+VITTD PIQPIMD ANE+ RAIMEREGYY W
Sbjct: 311 TGGFAMGIPANAPNREAAFLFIQYMTNKAGDQRMVELGGDPVRISTLQNNTEGFDDYPIVAEQLPCADPDWRPLIPEWNEINIDVLGQALTQVITTDDPIQPIMDKANEELRAIMEREGYYTW 433
BLAST of mRNA_M-pyrifera_M_contig114955.3103.1 vs. uniprot
Match: UPI0010A5D29E (extracellular solute-binding protein n=1 Tax=Primorskyibacter sp. XY-301 TaxID=2562685 RepID=UPI0010A5D29E) HSP 1 Score: 226 bits (577), Expect = 1.560e-70 Identity = 104/123 (84.55%), Postives = 114/123 (92.68%), Query Frame = 1
Query: 1 TGGFAAGIPANAPNKEAAFLFLQYITSKKGDQRMVELGGDPVRISTLQNNADKFDEYSVVAEQLPCADPDWRPLIPEWNELNIDVLGQALTEVITTDKPIQPIMDAANEKARAIMEREGYYVW 369
TGGFA GIP NAPNKEAAFLF+QY+TSK GDQRMVELGGDP+RISTL+NNAD++ +Y+V AEQLPCADPDWRPLIPEWNE+NIDVLGQALT+VITTD PIQPIMD ANEK RAIMEREGYY W
Sbjct: 316 TGGFALGIPDNAPNKEAAFLFIQYMTSKAGDQRMVELGGDPIRISTLKNNADQYPDYAVTAEQLPCADPDWRPLIPEWNEINIDVLGQALTQVITTDDPIQPIMDEANEKLRAIMEREGYYTW 438
BLAST of mRNA_M-pyrifera_M_contig114955.3103.1 vs. uniprot
Match: UPI0019805E37 (extracellular solute-binding protein n=1 Tax=Pelagibius litoralis TaxID=374515 RepID=UPI0019805E37) HSP 1 Score: 223 bits (569), Expect = 2.660e-69 Identity = 105/123 (85.37%), Postives = 114/123 (92.68%), Query Frame = 1
Query: 1 TGGFAAGIPANAPNKEAAFLFLQYITSKKGDQRMVELGGDPVRISTLQNNADKFDEYSVVAEQLPCADPDWRPLIPEWNELNIDVLGQALTEVITTDKPIQPIMDAANEKARAIMEREGYYVW 369
TGGFA GIPAN+ NKEAAFLF+QYITSK GD+RMVELGGDP+R+ST+ + AD+F EY VVAEQLPCADPDWRPLIPEWNELNIDVLGQALTEVIT+DKPIQPIMDAA EKARAIMEREGYY W
Sbjct: 321 TGGFAVGIPANSQNKEAAFLFIQYITSKAGDKRMVELGGDPIRLSTIAHFADQFPEYPVVAEQLPCADPDWRPLIPEWNELNIDVLGQALTEVITSDKPIQPIMDAAAEKARAIMEREGYYAW 443
BLAST of mRNA_M-pyrifera_M_contig114955.3103.1 vs. uniprot
Match: A0A5B8LUZ4_9HYPH (Extracellular solute-binding protein n=2 Tax=Devosia ginsengisoli TaxID=400770 RepID=A0A5B8LUZ4_9HYPH) HSP 1 Score: 203 bits (516), Expect = 2.440e-61 Identity = 93/125 (74.40%), Postives = 108/125 (86.40%), Query Frame = 1
Query: 1 TGGFAAGIPANAPNKEAAFLFLQYITSKKGDQRMVELGGDPVRISTLQNNADKFDEYSVVAEQLPCADPDWRPLIPEWNELNIDVLGQALTEVITTDKPIQPIMDAANEKARAIMEREGYYVWQN 375
TGGFA GIPAN+ N++AAFLF+QY+TSK GDQR+VELGGDP+R+STL+ N F EY V EQLPCAD DWRPLIPE+NELN+D+LGQALTE+ITTD PIQPIMDAA EKARA+MER GYY W +
Sbjct: 321 TGGFALGIPANSQNQQAAFLFIQYMTSKLGDQRIVELGGDPIRMSTLEANVGNFAEYQTVLEQLPCADADWRPLIPEYNELNVDILGQALTEIITTDSPIQPIMDAAVEKARAMMERAGYYAWND 445
BLAST of mRNA_M-pyrifera_M_contig114955.3103.1 vs. uniprot
Match: A0A845CH79_9BACT (Extracellular solute-binding protein n=1 Tax=Nitrospinae bacterium TaxID=2026769 RepID=A0A845CH79_9BACT) HSP 1 Score: 191 bits (486), Expect = 6.760e-57 Identity = 91/127 (71.65%), Postives = 109/127 (85.83%), Query Frame = 1
Query: 1 TGGFAAGIPANAPNKEAAFLFLQYITSKKGDQRMVELGGDPVRISTLQNN--ADKFDEYSVVAEQLPCADPDWRPLIPEWNELNIDVLGQALTEVITTDKPIQPIMDAANEKARAIMEREGYYVWQN 375
TGGFA GIPAN+ NKEAAFLF+Q++TSKK D+R+VELGGDP+RISTL + + KF EY V+AEQL CADPDWRPLIPEWNELNI VLG AL EV+T+DKPI+P++D A KARA+M+REGYY WQ+
Sbjct: 321 TGGFAMGIPANSKNKEAAFLFIQWMTSKKADRRIVELGGDPIRISTLTDPVFSKKFPEYPVIAEQLKCADPDWRPLIPEWNELNIKVLGIALHEVLTSDKPIKPLLDKAAVKARAVMKREGYYRWQS 447
BLAST of mRNA_M-pyrifera_M_contig114955.3103.1 vs. uniprot
Match: A0A7C5KR28_9CHLR (Extracellular solute-binding protein n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C5KR28_9CHLR) HSP 1 Score: 141 bits (356), Expect = 1.840e-40 Identity = 65/127 (51.18%), Postives = 90/127 (70.87%), Query Frame = 1
Query: 1 TGGFAAGIPANAPNKEAAFLFLQYITSKKGDQRMVELGGDPVRISTLQNNA--DKFDEYSVVAEQLPCADPDWRPLIPEWNELNIDVLGQALTEVITTDKPIQPIMDAANEKARAIMEREGYYVWQN 375
TGGFA GIP N+ +KEAAFLF+Q++TSKKGD+ +VE GGDPVR+ST+ + +F EY V+ EQL CA+ +WRPLIPEW E+N ++G L E ++ + + + AA + + +MER GYY W N
Sbjct: 42 TGGFAMGIPNNSAHKEAAFLFIQWMTSKKGDRLIVEAGGDPVRMSTMADPELQKRFPEYPVILEQLKCANENWRPLIPEWGEINAPIMGVNLGEYVSGEADLDAALGAAKSQIQDVMERAGYYTWAN 168
BLAST of mRNA_M-pyrifera_M_contig114955.3103.1 vs. uniprot
Match: A0A6L3F092_9CHLR (Sugar ABC transporter substrate-binding protein (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6L3F092_9CHLR) HSP 1 Score: 134 bits (338), Expect = 3.940e-34 Identity = 62/123 (50.41%), Postives = 86/123 (69.92%), Query Frame = 1
Query: 1 TGGFAAGIPANAPNKEAAFLFLQYITSKKGDQRMVELGGDPVRISTLQNNA--DKFDEYSVVAEQLPCADPDWRPLIPEWNELNIDVLGQALTEVITTDKPIQPIMDAANEKARAIMEREGYY 363
TGGFA GI N+ NK+AA+LFLQY+TSK+GD++MVE GGDPVR+STL + A ++F EY V+ EQL CA+ +WRPLIPEW E+N ++G+ + + + + A + +MER GYY
Sbjct: 382 TGGFAMGIAENSANKDAAYLFLQYMTSKEGDRKMVEAGGDPVRLSTLADPALQERFPEYPVILEQLACANENWRPLIPEWGEINAQIMGEQIGAYLNDAIDAETALATAKTQTEEVMERAGYY 504
BLAST of mRNA_M-pyrifera_M_contig114955.3103.1 vs. uniprot
Match: UPI0010A5A724 (extracellular solute-binding protein n=1 Tax=Primorskyibacter sp. XY-301 TaxID=2562685 RepID=UPI0010A5A724) HSP 1 Score: 131 bits (329), Expect = 7.770e-34 Identity = 66/127 (51.97%), Postives = 85/127 (66.93%), Query Frame = 1
Query: 1 TGGFAAGIPANAPNKEAAFLFLQYITSKKGDQRMVELGGDPVRISTLQN---NADKFDEYSVVAEQLPCADPDWRPLIPEWNELNIDVLGQALTEVITTDKPIQPIMDAANEKARAIMEREGYYVWQ 372
TGGF GIPANA NKEAAFL +Q++TSK+GD+ + GG+P R ST ++ NA KF + E L ADPDWRP+IP W ++N D LG L++V+T D IQ +D E+ RA+ME GYY WQ
Sbjct: 317 TGGFGIGIPANAENKEAAFLLMQWLTSKQGDKLVALAGGNPSRFSTHEDAEVNA-KFPHMATFGEALKHADPDWRPIIPVWGKINAD-LGTTLSKVLTEDLDIQEALDGVAERTRAVMEEAGYYTWQ 441
BLAST of mRNA_M-pyrifera_M_contig114955.3103.1 vs. uniprot
Match: A0A1I3RCU1_9RHOB (Carbohydrate ABC transporter substrate-binding protein, CUT1 family n=2 Tax=Jannaschia TaxID=188905 RepID=A0A1I3RCU1_9RHOB) HSP 1 Score: 129 bits (323), Expect = 5.740e-33 Identity = 66/127 (51.97%), Postives = 82/127 (64.57%), Query Frame = 1
Query: 1 TGGFAAGIPANAPNKEAAFLFLQYITSKKGDQRMVELGGDPVRISTLQN---NADKFDEYSVVAEQLPCADPDWRPLIPEWNELNIDVLGQALTEVITTDKPIQPIMDAANEKARAIMEREGYYVWQ 372
TGGF GIP NAPNKEAAFL LQ++TSK+GD + GG+P R ST QN NA KF + E L ADPDWRP+IP W ++N D+ G +++V+T Q +D E+ RAIME GYY WQ
Sbjct: 316 TGGFGIGIPRNAPNKEAAFLLLQWLTSKQGDLAVAMEGGNPSRFSTYQNAELNA-KFPYSATFGEALQYADPDWRPIIPVWGQINADI-GTTMSQVLTEGLDPQEALDGVAERTRAIMEEAGYYSWQ 440
BLAST of mRNA_M-pyrifera_M_contig114955.3103.1 vs. uniprot
Match: E2CHW8_9HYPH (Extracellular solute-binding protein n=1 Tax=Roseibium sp. TrichSKD4 TaxID=744980 RepID=E2CHW8_9HYPH) HSP 1 Score: 128 bits (322), Expect = 8.120e-33 Identity = 61/126 (48.41%), Postives = 83/126 (65.87%), Query Frame = 1
Query: 1 TGGFAAGIPANAPNKEAAFLFLQYITSKKGDQRMVELGGDPVRISTLQNNA--DKFDEYSVVAEQLPCADPDWRPLIPEWNELNIDVLGQALTEVITTDKPIQPIMDAANEKARAIMEREGYYVWQ 372
TGGF GIPANA +KEAAFL +Q++TSK+GD+ + GG+P R ST Q+ +KF + E L ADPDWRP+IP W ++N D LG L++V+T D +Q +D E+ R +M+ GYY WQ
Sbjct: 318 TGGFGIGIPANAEHKEAAFLLMQWLTSKQGDKLVAMAGGNPSRFSTHQDEDVNEKFPHMATFGEALKHADPDWRPIIPVWGKINAD-LGTTLSKVLTEDLDVQEALDGVAERTRTVMDEAGYYTWQ 442 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114955.3103.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig114955.3103.1 >prot_M-pyrifera_M_contig114955.3103.1 ID=prot_M-pyrifera_M_contig114955.3103.1|Name=mRNA_M-pyrifera_M_contig114955.3103.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=126bp TGGFAAGIPANAPNKEAAFLFLQYITSKKGDQRMVELGGDPVRISTLQNNback to top mRNA from alignment at M-pyrifera_M_contig114955:3..380+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig114955.3103.1 ID=mRNA_M-pyrifera_M_contig114955.3103.1|Name=mRNA_M-pyrifera_M_contig114955.3103.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=378bp|location=Sequence derived from alignment at M-pyrifera_M_contig114955:3..380+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig114955:3..380+ >mRNA_M-pyrifera_M_contig114955.3103.1 ID=mRNA_M-pyrifera_M_contig114955.3103.1|Name=mRNA_M-pyrifera_M_contig114955.3103.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=756bp|location=Sequence derived from alignment at M-pyrifera_M_contig114955:3..380+ (Macrocystis pyrifera P11B4 male)back to top |