mRNA_M-pyrifera_M_contig114804.3077.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig114804.3077.1 vs. uniprot
Match: A0A848UJZ9_9ACTN (Transport permease protein n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A848UJZ9_9ACTN) HSP 1 Score: 289 bits (740), Expect = 2.120e-96 Identity = 149/174 (85.63%), Postives = 160/174 (91.95%), Query Frame = 1
Query: 25 DFKAFQLPVAIIFAVTGVSRASSLVTDIQGGYFDRLLLTPIRRPALLLGLMAADLMAVIMLAIPVTALGLVLGVRFETGILGMIVFLFYGAAWGLAFAGFPYAIALKTGNPAAVNSSFILFFPFAFLTSSFLPKESLTGWLSTIATSNPVTYVLDGLRALSSDGWVWAALGKGL 546
DFKAFQLPV+IIFAVTGVSRAS+LVTDIQGGYFDRLLLTPIRRP LLLGLMAADLMAV+MLA+PV LGLVLGV F TGILGM+VFL YGA WGLAFAGFPYAIALKTGNPAAVNSSFILFFPFAFLT++FLPKE+LTGWLS +AT NPVTYVLDGLR+L + GW W LGKGL
Sbjct: 77 DFKAFQLPVSIIFAVTGVSRASALVTDIQGGYFDRLLLTPIRRPTLLLGLMAADLMAVLMLAVPVLLLGLVLGVSFTTGILGMVVFLLYGALWGLAFAGFPYAIALKTGNPAAVNSSFILFFPFAFLTTTFLPKEALTGWLSAVATYNPVTYVLDGLRSLITVGWEWTTLGKGL 250
BLAST of mRNA_M-pyrifera_M_contig114804.3077.1 vs. uniprot
Match: A0A6I3WW02_9ACTN (Transport permease protein n=2 Tax=root TaxID=1 RepID=A0A6I3WW02_9ACTN) HSP 1 Score: 254 bits (649), Expect = 1.020e-82 Identity = 132/177 (74.58%), Postives = 148/177 (83.62%), Query Frame = 1
Query: 10 AGGSLDFKAFQLPVAIIFAVTGVSRASSLVTDIQGGYFDRLLLTPIRRPALLLGLMAADLMAVIMLAIPVTALGLVLGVRFETGILGMIVFLFYGAAWGLAFAGFPYAIALKTGNPAAVNSSFILFFPFAFLTSSFLPKESLTGWLSTIATSNPVTYVLDGLRALSSDGWVWAALGK 540
A +FKAFQLPV+I+FAVTGVSRA SLVTDIQ GYFDRLLLTP+RR LLLGLM ADL VI L IPV ALGL+LGV F TG +G+++FL G WGLAF GFPYAIALKTGNPAAVNSSF+LFFPFAFLT++FLPKE+LTGWLST+AT NPVTY+LDGLRA+ DGW AL K
Sbjct: 63 APAGFNFKAFQLPVSIVFAVTGVSRAGSLVTDIQDGYFDRLLLTPVRRTTLLLGLMTADLALVITLCIPVVALGLILGVTFATGFVGLVLFLLMGGLWGLAFTGFPYAIALKTGNPAAVNSSFLLFFPFAFLTTAFLPKEALTGWLSTVATWNPVTYLLDGLRAIVLDGWDGTALLK 239
BLAST of mRNA_M-pyrifera_M_contig114804.3077.1 vs. uniprot
Match: A0A7W0LQL3_9ACTN (Transport permease protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W0LQL3_9ACTN) HSP 1 Score: 248 bits (633), Expect = 3.030e-80 Identity = 126/174 (72.41%), Postives = 148/174 (85.06%), Query Frame = 1
Query: 25 DFKAFQLPVAIIFAVTGVSRASSLVTDIQGGYFDRLLLTPIRRPALLLGLMAADLMAVIMLAIPVTALGLVLGVRFETGILGMIVFLFYGAAWGLAFAGFPYAIALKTGNPAAVNSSFILFFPFAFLTSSFLPKESLTGWLSTIATSNPVTYVLDGLRALSSDGWVWAALGKGL 546
DFKAFQLPVAIIFAVTG+SRAS+LVTDIQ GYFDRLL+TP+RR ALLLGLM AD V+ L++PV LGL+LGV F TG+ GM+VF+ AWG+ F GFPYAIALKTGNPAAVNSSFILFFPFAFLT++FLP+E++TGWL TIA NPVTY+LDGLRAL ++GWV L +G+
Sbjct: 71 DFKAFQLPVAIIFAVTGISRASTLVTDIQSGYFDRLLMTPVRRLALLLGLMVADFALVVALSVPVVILGLLLGVEFVTGLAGMVVFILLAGAWGVVFTGFPYAIALKTGNPAAVNSSFILFFPFAFLTTAFLPREAMTGWLDTIAGYNPVTYLLDGLRALVTEGWVGEDLLQGV 244
BLAST of mRNA_M-pyrifera_M_contig114804.3077.1 vs. uniprot
Match: A0A538JN84_9ACTN (Transport permease protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538JN84_9ACTN) HSP 1 Score: 242 bits (617), Expect = 3.870e-78 Identity = 123/166 (74.10%), Postives = 142/166 (85.54%), Query Frame = 1
Query: 22 LDFKAFQLPVAIIFAVTGVSRASSLVTDIQGGYFDRLLLTPIRRPALLLGLMAADLMAVIMLAIPVTALGLVLGVRFETGILGMIVFLFYGAAWGLAFAGFPYAIALKTGNPAAVNSSFILFFPFAFLTSSFLPKESLTGWLSTIATSNPVTYVLDGLRALSSDGW 519
LDFKAFQ+PVAIIFAVTG+SRAS+LVTDIQ GYFDRL +TP+RR ALLLGLM AD+ VI L IPV LG GVRFETG +GM++FL AWGL F GFPYAIALKTGNPAAVNSSFILFFPFAFLT++F PK++L+GWL+T+AT NPVTY+L GLR+L S+GW
Sbjct: 47 LDFKAFQVPVAIIFAVTGISRASTLVTDIQDGYFDRLCVTPVRRLALLLGLMVADVAVVIALCIPVLLLGFAYGVRFETGPIGMLLFLLIAGAWGLVFTGFPYAIALKTGNPAAVNSSFILFFPFAFLTTAFQPKQALSGWLATVATYNPVTYLLSGLRSLVSEGW 212
BLAST of mRNA_M-pyrifera_M_contig114804.3077.1 vs. uniprot
Match: A0A7V9B4V0_9ACTN (Transport permease protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V9B4V0_9ACTN) HSP 1 Score: 242 bits (617), Expect = 9.210e-78 Identity = 123/178 (69.10%), Postives = 148/178 (83.15%), Query Frame = 1
Query: 13 GGSLDFKAFQLPVAIIFAVTGVSRASSLVTDIQGGYFDRLLLTPIRRPALLLGLMAADLMAVIMLAIPVTALGLVLGVRFETGILGMIVFLFYGAAWGLAFAGFPYAIALKTGNPAAVNSSFILFFPFAFLTSSFLPKESLTGWLSTIATSNPVTYVLDGLRALSSDGWVWAALGKGL 546
G D+KAFQLPVAI+FAVTG+SRAS+LVTDIQ GYFDRL +TP+ R +LLLGLM AD + V+ L+IPV LGL +GV E+G+LG ++FL + WGLAF GFPYAIALKTGNPAAVNSSF+LFFPFAFLT+SF+P+E+LT WL T AT NPVTY+LDGLR+L S+GW AALGK +
Sbjct: 71 GPGFDYKAFQLPVAIVFAVTGISRASTLVTDIQNGYFDRLQMTPVSRLSLLLGLMVADFVNVLALSIPVLGLGLAVGVDVESGVLGALLFLLLASLWGLAFTGFPYAIALKTGNPAAVNSSFLLFFPFAFLTTSFVPQEALTSWLGTTATYNPVTYLLDGLRSLLSEGWDAAALGKAI 248
BLAST of mRNA_M-pyrifera_M_contig114804.3077.1 vs. uniprot
Match: A0A1H1NYV9_9CELL (Transport permease protein n=2 Tax=Paraoerskovia marina TaxID=545619 RepID=A0A1H1NYV9_9CELL) HSP 1 Score: 241 bits (616), Expect = 1.310e-77 Identity = 127/180 (70.56%), Postives = 149/180 (82.78%), Query Frame = 1
Query: 4 AAAGGSLDFKAFQLPVAIIFAVTGVSRASSLVTDIQGGYFDRLLLTPIRRPALLLGLMAADLMAVIMLAIPVTALGLVLGVRFETGILGMIVFLFYGAAWGLAFAGFPYAIALKTGNPAAVNSSFILFFPFAFLTSSFLPKESLTGWLSTIATSNPVTYVLDGLRALSSDGWVWAALGKG 543
A A G DFKAFQ+PVAI+FAVTGVSRAS+LVTDI GYFDRLL++P+ R ALLLGLM ADL VI L+IPV LG LGV FETG++G++VFL + AWGLAF GFPYAIAL+TGNPAAVNSSF+LFFPFAFLT++FLP+E+LTGWL+TIA NPVTY+L LR+L S GW AL +G
Sbjct: 68 AGATGVEDFKAFQIPVAIVFAVTGVSRASALVTDITDGYFDRLLVSPVHRTALLLGLMVADLALVIGLSIPVLILGFALGVTFETGVVGVLVFLLFAGAWGLAFTGFPYAIALRTGNPAAVNSSFLLFFPFAFLTTTFLPQEALTGWLATIADYNPVTYLLAALRSLISTGWDVTALWQG 247
BLAST of mRNA_M-pyrifera_M_contig114804.3077.1 vs. uniprot
Match: A0A7V8YLU3_9ACTN (Transport permease protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V8YLU3_9ACTN) HSP 1 Score: 241 bits (616), Expect = 1.350e-77 Identity = 125/173 (72.25%), Postives = 145/173 (83.82%), Query Frame = 1
Query: 25 DFKAFQLPVAIIFAVTGVSRASSLVTDIQGGYFDRLLLTPIRRPALLLGLMAADLMAVIMLAIPVTALGLVLGVRFETGILGMIVFLFYGAAWGLAFAGFPYAIALKTGNPAAVNSSFILFFPFAFLTSSFLPKESLTGWLSTIATSNPVTYVLDGLRALSSDGWVWAALGKG 543
DF+AFQLPVAIIFAVTG+SRAS+LVTDIQ GYFDRLL+TPIRR +LLLGLM ADL VI L+IPV LG +GVRFETG+ G ++F+ WGLAF GFPYAIALKTGNPAAVN+SFILFFPFAFLT++FLP+E+LTGWLSTI+ NPVTY+L G+RAL GW A + KG
Sbjct: 76 DFRAFQLPVAIIFAVTGISRASALVTDIQNGYFDRLLMTPIRRLSLLLGLMIADLALVIALSIPVVMLGFAVGVRFETGVAGTLLFVLMAGLWGLAFTGFPYAIALKTGNPAAVNTSFILFFPFAFLTTAFLPQEALTGWLSTISDWNPVTYLLAGMRALILTGWDGAEIAKG 248
BLAST of mRNA_M-pyrifera_M_contig114804.3077.1 vs. uniprot
Match: A0A161IEP4_9MICO (Transport permease protein n=2 Tax=Isoptericola TaxID=254250 RepID=A0A161IEP4_9MICO) HSP 1 Score: 241 bits (614), Expect = 2.390e-77 Identity = 124/177 (70.06%), Postives = 147/177 (83.05%), Query Frame = 1
Query: 16 GSLDFKAFQLPVAIIFAVTGVSRASSLVTDIQGGYFDRLLLTPIRRPALLLGLMAADLMAVIMLAIPVTALGLVLGVRFETGILGMIVFLFYGAAWGLAFAGFPYAIALKTGNPAAVNSSFILFFPFAFLTSSFLPKESLTGWLSTIATSNPVTYVLDGLRALSSDGWVWAALGKGL 546
G DFKAFQ+PVAIIFAVTGVSRAS+LVTDI GGYFDRLL+TP+ R ALLLGLM ADL V+ L++PV LG VLGV+F TG+ G++VFL WGLAF GFPYAIAL+TGNPAAVNSSF+LFFPFAFLT++FLP E++TGWL+TIA NPVTY+L LR+L +DGW AL +G+
Sbjct: 69 GVEDFKAFQIPVAIIFAVTGVSRASALVTDITGGYFDRLLVTPVHRTALLLGLMVADLALVVALSVPVLVLGFVLGVQFVTGVAGVLVFLLLAGLWGLAFTGFPYAIALRTGNPAAVNSSFLLFFPFAFLTTTFLPLEAMTGWLATIAELNPVTYLLAALRSLITDGWDVTALWQGV 245
BLAST of mRNA_M-pyrifera_M_contig114804.3077.1 vs. uniprot
Match: A0A6G8Q536_9ACTN (Transport permease protein n=3 Tax=Rubrobacteraceae TaxID=84997 RepID=A0A6G8Q536_9ACTN) HSP 1 Score: 239 bits (611), Expect = 6.390e-77 Identity = 124/173 (71.68%), Postives = 145/173 (83.82%), Query Frame = 1
Query: 16 GSLDFKAFQLPVAIIFAVTGVSRASSLVTDIQGGYFDRLLLTPIRRPALLLGLMAADLMAVIMLAIPVTALGLVLGVRFETGILGMIVFLFYGAAWGLAFAGFPYAIALKTGNPAAVNSSFILFFPFAFLTSSFLPKESLTGWLSTIATSNPVTYVLDGLRALSSDGWVWAAL 534
G DF+AFQLPVAI+FAVTG+SRAS+LVTDIQ GYFDRLL++P+ R +LLLGLMAADL+ VI L +PV LG +LGV F TG LG++ FL WGLAF GFPYAIAL+TGNPAAVNSSFILFFPFAFLT++FLP+E+LTGWL+T+A NPVTY+L GLRAL S GWV A L
Sbjct: 68 GVEDFEAFQLPVAIVFAVTGISRASALVTDIQSGYFDRLLVSPVSRYSLLLGLMAADLVLVIALCVPVLVLGFILGVGFATGPLGVLAFLLLSGLWGLAFTGFPYAIALRTGNPAAVNSSFILFFPFAFLTTTFLPQEALTGWLATVADYNPVTYLLAGLRALISSGWVLADL 240
BLAST of mRNA_M-pyrifera_M_contig114804.3077.1 vs. uniprot
Match: A0A191UTG5_9ACTN (Transport permease protein n=5 Tax=Streptomyces TaxID=1883 RepID=A0A191UTG5_9ACTN) HSP 1 Score: 239 bits (611), Expect = 6.590e-77 Identity = 124/177 (70.06%), Postives = 143/177 (80.79%), Query Frame = 1
Query: 16 GSLDFKAFQLPVAIIFAVTGVSRASSLVTDIQGGYFDRLLLTPIRRPALLLGLMAADLMAVIMLAIPVTALGLVLGVRFETGILGMIVFLFYGAAWGLAFAGFPYAIALKTGNPAAVNSSFILFFPFAFLTSSFLPKESLTGWLSTIATSNPVTYVLDGLRALSSDGWVWAALGKGL 546
G DF+AFQLPVAIIFAVTGVSRAS LVTDI GYFDRLLLTP+RR ALLLGLM ADL V+ L +PV LGLV+GV F TG+ G + F+ WGLAF GFPYAIAL+TG+P AVNSSF+LFFPFAFLT+SFLP+++LTGWL+TIA NPVTY+L LR+L SDGW W+ L GL
Sbjct: 68 GVRDFRAFQLPVAIIFAVTGVSRASGLVTDISSGYFDRLLLTPMRRTALLLGLMVADLALVMALCVPVIVLGLVVGVGFTTGVPGAVAFVVIAGLWGLAFTGFPYAIALRTGSPGAVNSSFLLFFPFAFLTTSFLPQQALTGWLATIADYNPVTYLLAALRSLLSDGWSWSGLWPGL 244 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114804.3077.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig114804.3077.1 >prot_M-pyrifera_M_contig114804.3077.1 ID=prot_M-pyrifera_M_contig114804.3077.1|Name=mRNA_M-pyrifera_M_contig114804.3077.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=182bp AAAAGGSLDFKAFQLPVAIIFAVTGVSRASSLVTDIQGGYFDRLLLTPIRback to top mRNA from alignment at M-pyrifera_M_contig114804:3..548- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig114804.3077.1 ID=mRNA_M-pyrifera_M_contig114804.3077.1|Name=mRNA_M-pyrifera_M_contig114804.3077.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=546bp|location=Sequence derived from alignment at M-pyrifera_M_contig114804:3..548- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig114804:3..548- >mRNA_M-pyrifera_M_contig114804.3077.1 ID=mRNA_M-pyrifera_M_contig114804.3077.1|Name=mRNA_M-pyrifera_M_contig114804.3077.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1092bp|location=Sequence derived from alignment at M-pyrifera_M_contig114804:3..548- (Macrocystis pyrifera P11B4 male)back to top |