mRNA_M-pyrifera_M_contig11408.2934.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig11408.2934.1
Unique NamemRNA_M-pyrifera_M_contig11408.2934.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig11408.2934.1 vs. uniprot
Match: D8LHA2_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA2_ECTSI)

HSP 1 Score: 367 bits (942), Expect = 9.520e-126
Identity = 178/248 (71.77%), Postives = 205/248 (82.66%), Query Frame = 1 
Query:   10 FLASRRQVEAQDTPSRNDVIIKPECDSNARTLLRYSASSERLYLESADGITRGGCVTLTQIWEQLAGRVPLYAVEPGSGNVSTTATGTWLLTETLYVEDGITLQVHGTSAGGDADELRLLSTSATYINLRGYGGSLDFVGTKVFAWDTDINAVDEDVTDGRSFISAISEVITDETQACIGKAKSNMGEARMDIEDSEMGYLGFQDGESYGLTWKVRGFCKDLSNPELFDDVNVYGNIYDSNIHHNRFG 753
             LAS     A DT S ND I KP+CDS+    +RY+ +++RLYLESADG TRGGC TL Q+WE  AG+ PLYAV+P SG+VS T TGTWLLTE LYVEDGITL+V+GT  GGDADELRLLSTS TYINLR YGGSLDFVGTKVF+WDT  N+ D   TDGRS+ISA+SE++TDE ++C G AK+ MGEARMDIE+SE+GYLGFQD ESYGLTWKVRGFCKD SNPE+FDDVNVYGN+YDS+IHH RFG
Sbjct:   19 LLASTTPAAAADTASPNDPISKPDCDSDIEVSIRYAGNTKRLYLESADGETRGGCATLGQVWESRAGKGPLYAVDPDSGDVSETQTGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSDTYINLRAYGGSLDFVGTKVFSWDTSTNSPDVVETDGRSYISAVSEIVTDEDESCEGHAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFG 266
[Close]
BLAST of mRNA_M-pyrifera_M_contig11408.2934.1 vs. uniprot
Match: A0A6H5JU98_9PHAE (MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU98_9PHAE)

HSP 1 Score: 368 bits (945), Expect = 2.460e-125
Identity = 179/248 (72.18%), Postives = 206/248 (83.06%), Query Frame = 1 
Query:   10 FLASRRQVEAQDTPSRNDVIIKPECDSNARTLLRYSASSERLYLESADGITRGGCVTLTQIWEQLAGRVPLYAVEPGSGNVSTTATGTWLLTETLYVEDGITLQVHGTSAGGDADELRLLSTSATYINLRGYGGSLDFVGTKVFAWDTDINAVDEDVTDGRSFISAISEVITDETQACIGKAKSNMGEARMDIEDSEMGYLGFQDGESYGLTWKVRGFCKDLSNPELFDDVNVYGNIYDSNIHHNRFG 753
             LA+  +  A DT S ND I KP+CDS+    +RY++S++RLYLESADG TRGGCVTL QIWE  AG+ PLYAV+P SGN S   TGTWLLTE LYVEDGITL+V+GT  GGDADELRLLST+ TYINLR +GGSLDFVGTKVF+WDT  N+ DED TDGRS+ISAISE+ITDE + C G AK+ MGEARMDIE+SE+GYLGFQD ESYGLTWKVRGFCKD SNP +FD+VNVYGN+YDS+IHH RFG
Sbjct:   18 LLAATMRAAAADTASPNDPISKPDCDSDIAVSIRYASSTKRLYLESADGETRGGCVTLGQIWENRAGKAPLYAVDPESGNESENETGTWLLTEELYVEDGITLKVYGTGEGGDADELRLLSTTDTYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPGIFDEVNVYGNMYDSDIHHMRFG 265
[Close]
BLAST of mRNA_M-pyrifera_M_contig11408.2934.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 373 bits (958), Expect = 6.620e-125
Identity = 180/248 (72.58%), Postives = 206/248 (83.06%), Query Frame = 1 
Query:   10 FLASRRQVEAQDTPSRNDVIIKPECDSNARTLLRYSASSERLYLESADGITRGGCVTLTQIWEQLAGRVPLYAVEPGSGNVSTTATGTWLLTETLYVEDGITLQVHGTSAGGDADELRLLSTSATYINLRGYGGSLDFVGTKVFAWDTDINAVDEDVTDGRSFISAISEVITDETQACIGKAKSNMGEARMDIEDSEMGYLGFQDGESYGLTWKVRGFCKDLSNPELFDDVNVYGNIYDSNIHHNRFG 753
             LAS     A DT S ND I KP+CDS+    +RY+ +++RLYLESADG TRGGC TL QIWE  AG+ PLYAV+P SG+VS T TGTWLLTE LYVEDGITL+V+GT  GGDADELRLLSTS TYINLR +GGSLDFVGTKVF+WDT  N+ DED TDGRS+ISA+SE++TDE + C G AK+ MGEARMDIE+SE+GYLGFQD ESYGLTWKVRGFCKD SNPE+FDDVNVYGN+YDS+IHH RFG
Sbjct:   19 LLASTTPAAAADTASPNDPISKPDCDSDIEVSIRYAGTTKRLYLESADGETRGGCATLGQIWESRAGKAPLYAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFG 266
[Close]
BLAST of mRNA_M-pyrifera_M_contig11408.2934.1 vs. uniprot
Match: Q7XAK2_9PHAE (Mannuronan C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE)

HSP 1 Score: 356 bits (914), Expect = 2.180e-118
Identity = 175/247 (70.85%), Postives = 202/247 (81.78%), Query Frame = 1 
Query:   13 LASRRQVEAQDTPSRNDVIIKPECDSNARTLLRYSASSERLYLESADGITRGGCVTLTQIWEQLAGRVPLYAVEPGSGNVSTTATGTWLLTETLYVEDGITLQVHGTSAGGDADELRLLSTSATYINLRGYGGSLDFVGTKVFAWDTDINAVDEDVTDGRSFISAISEVITDETQACIGKAKSNMGEARMDIEDSEMGYLGFQDGESYGLTWKVRGFCKDLSNPELFDDVNVYGNIYDSNIHHNRFG 753
            L + R  +A +T S+N  I KP C S+ +  +RYSASS+RLYLESADG TRGGCVTL +IW+ L G  PLYAV+P SG+VS++ATGTWLLTE LYVEDGITLQVHGTSAGG+A+ELRLLSTS  +INLR +GGSLDFV TKVFAWDT  N V  D +  RS+ISA+SE+ITD  + C GKAK  MGEARMDIEDSEM YLG+Q  ESYGLTWKVRGFCKD SNPE+FD+VNVYGNIYDS+IHHN FG
Sbjct:   16 LLAARGADAANTSSKNKAISKPSCKSSTKVSIRYSASSKRLYLESADGKTRGGCVTLEEIWKDLDGSAPLYAVKPSSGDVSSSATGTWLLTEDLYVEDGITLQVHGTSAGGNANELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDGSKARSYISAVSEIITDSKEKCDGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFG 262
[Close]
BLAST of mRNA_M-pyrifera_M_contig11408.2934.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE)

HSP 1 Score: 354 bits (909), Expect = 1.130e-117
Identity = 172/238 (72.27%), Postives = 197/238 (82.77%), Query Frame = 1 
Query:   40 QDTPSRNDVIIKPECDSNARTLLRYSASSERLYLESADGITRGGCVTLTQIWEQLAGRVPLYAVEPGSGNVSTTATGTWLLTETLYVEDGITLQVHGTSAGGDADELRLLSTSATYINLRGYGGSLDFVGTKVFAWDTDINAVDEDVTDGRSFISAISEVITDETQACIGKAKSNMGEARMDIEDSEMGYLGFQDGESYGLTWKVRGFCKDLSNPELFDDVNVYGNIYDSNIHHNRFG 753
            +DT S N+ I KPECD +    +RYS+  ERLYLESAD  TRGGCVTL QIWE   G  PLYAV+  SG++S +ATGTWLLTE L+VEDGITL+VHGTSAGGDADELRLLSTS T+INLR +GGSLDF+ TKVFAWDT IN  D D  DGRS++SA+SEVITD++Q C G+AK+NMGEARMDIEDSEMGYLG+   ESYGLTWKVRGFC D SN +LF+DVNVYGNIYDS+IHHN FG
Sbjct:   22 KDTKSPNEPIPKPECDESIAVSIRYSSVYERLYLESADSKTRGGCVTLEQIWEHQRGEAPLYAVDSKSGDISDSATGTWLLTEELFVEDGITLKVHGTSAGGDADELRLLSTSDTFINLRAHGGSLDFLSTKVFAWDTSINGPDRDEEDGRSYVSAVSEVITDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFG 259
[Close]
BLAST of mRNA_M-pyrifera_M_contig11408.2934.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE)

HSP 1 Score: 347 bits (889), Expect = 5.380e-115
Identity = 168/227 (74.01%), Postives = 192/227 (84.58%), Query Frame = 1 
Query:   73 KPECDSNARTLLRYSASSERLYLESADGITRGGCVTLTQIWEQLAGRVPLYAVEPGSGNVSTTATGTWLLTETLYVEDGITLQVHGTSAGGDADELRLLSTSATYINLRGYGGSLDFVGTKVFAWDTDINAVDEDVTDGRSFISAISEVITDETQACIGKAKSNMGEARMDIEDSEMGYLGFQDGESYGLTWKVRGFCKDLSNPELFDDVNVYGNIYDSNIHHNRFG 753
            KP+CDS+    +RY+A S RLY+ESA+G TRGGCVTL QIWEQ     PLYAV+P SG+VS +ATGTWLLTE +YVEDGITLQVHG SAGGDADELRLLSTS T+I+LR YGGSLDF+ TKVFAWDT  NA D+D +DGRS+ISA+SEVITD+ Q C G+AK+NMGEARMDIE+SEM YLG+   E+YGLTWKVRGFC D  NPELFDDVNVYGNIYDS+IHHN FG
Sbjct:    7 KPDCDSSIAVSVRYNAESARLYIESANGRTRGGCVTLEQIWEQQVDGSPLYAVDPKSGDVSRSATGTWLLTEEMYVEDGITLQVHGISAGGDADELRLLSTSDTFIHLRAYGGSLDFLSTKVFAWDTSKNAPDQDESDGRSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFG 233
[Close]
BLAST of mRNA_M-pyrifera_M_contig11408.2934.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA)

HSP 1 Score: 347 bits (889), Expect = 1.190e-114
Identity = 173/249 (69.48%), Postives = 197/249 (79.12%), Query Frame = 1 
Query:    7 LFLASRRQVEAQDTPSRNDVIIKPECDSNARTLLRYSASSERLYLESADGITRGGCVTLTQIWEQLAGRVPLYAVEPGSGNVSTTATGTWLLTETLYVEDGITLQVHGTSAGGDADELRLLSTSATYINLRGYGGSLDFVGTKVFAWDTDINAVDEDVTDGRSFISAISEVITDETQACIGKAKSNMGEARMDIEDSEMGYLGFQDGESYGLTWKVRGFCKDLSNPELFDDVNVYGNIYDSNIHHNRFG 753
            + L + R  +A +T SRN  I KP C S+ +  +RYS +S+RLYLESADG TRGGCVTL  IW  L G  PLYAV+P SG+VS++ TGTWLLTE+LYVEDGITLQVHG SAGG ADELRLLSTS  +INLR +GGSLDFV TKVFAWDT  N V  D + GRS+ISA+SEVITD  Q C G+AK NMGEARMDIEDSEM YLG+   ESYGLTWKVRG C+DLSN E+FD VNVYGNIYDS+IHHN FG
Sbjct:   11 MTLLAARGADAANTASRNKAIAKPSCKSSTKVSIRYSKTSKRLYLESADGNTRGGCVTLEDIWRDLDGGAPLYAVKPSSGDVSSSITGTWLLTESLYVEDGITLQVHGKSAGGKADELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDDSKGRSYISAVSEVITDSKQKCDGRAKKNMGEARMDIEDSEMAYLGYFGSESYGLTWKVRGLCRDLSNLEVFDAVNVYGNIYDSDIHHNYFG 259
[Close]
BLAST of mRNA_M-pyrifera_M_contig11408.2934.1 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI)

HSP 1 Score: 338 bits (866), Expect = 1.800e-112
Identity = 164/217 (75.58%), Postives = 188/217 (86.64%), Query Frame = 1 
Query:  106 LRYSASSERLYLESAD-GITRGGCVTLTQIWEQLAGRVPLYAVEPGSGNVSTTATGTWLLTETLYVEDGITLQVHGTSAGGDADELRLLSTSATYINLRGYGGSLDFVGTKVFAWDTDINAVDEDVTDGRSFISAISEVITDETQACIGKAKSNMGEARMDIEDSEMGYLGFQDGESYGLTWKVRGFCKDLSNPELFDDVNVYGNIYDSNIHHNRFG 753
            +RY+ S+ RLYLESAD G TRGGCVTL QIWE  AG+ PLYAV+P SGNVST+ATGTWLLTE LYVEDGITL+V+G+ AGGDADELRLLST+ T+INLR +GGSLDFV TKVF+WDT  N+ DED TDGRS+ISAISE+ITDE + C G AK+ MGEARMDIE SE+GYLG+ D ESYGLTWKVRGFC+D SNPE+FDDVNVYGN+YDS+IHH  FG
Sbjct:   46 IRYAESTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLEVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFG 262
[Close]
BLAST of mRNA_M-pyrifera_M_contig11408.2934.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 337 bits (864), Expect = 9.280e-111
Identity = 164/223 (73.54%), Postives = 190/223 (85.20%), Query Frame = 1 
Query:   88 SNARTLLRYSASSERLYLESAD-GITRGGCVTLTQIWEQLAGRVPLYAVEPGSGNVSTTATGTWLLTETLYVEDGITLQVHGTSAGGDADELRLLSTSATYINLRGYGGSLDFVGTKVFAWDTDINAVDEDVTDGRSFISAISEVITDETQACIGKAKSNMGEARMDIEDSEMGYLGFQDGESYGLTWKVRGFCKDLSNPELFDDVNVYGNIYDSNIHHNRFG 753
            S+    +RY+ ++ RLYLESAD G TRGGCVTL QIWE  AG+ PLYAV+P SGNVST+ATGTWLLTE LYVEDGITL+V+G+ AGGDADELRLLST+ T+INLR +GGSLDFV TKVF+WDT  N+ DED TDGRS+ISAISE+ITDE + C G AK+ MGEARMDIE SE+GYLG+ D ESYGLTWKVRGFC+D SNPE+FDDVNVYGN+YDS+IHH  FG
Sbjct:   40 SDIAVSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFG 262
[Close]
BLAST of mRNA_M-pyrifera_M_contig11408.2934.1 vs. uniprot
Match: D8LD45_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD45_ECTSI)

HSP 1 Score: 305 bits (780), Expect = 4.270e-97
Identity = 157/249 (63.05%), Postives = 179/249 (71.89%), Query Frame = 1 
Query:   43 DTPSRNDVIIKPECDSNARTLLRYSASSERLYLESADGITRGGCVTLTQIWEQLAG------RVPLYAVEPGSGNVSTTATGTWLLTETLYVEDGITLQVHGTSAGGDADELRLLST-------SATYINLRGYGGSLDFVGTKVFAWDTDINAVDEDVTDGRSFISAISEVITDETQACIGKAKSNMGEARMDIEDSEMGYLGFQDGESYGLTWKVRGFCKDLSNPELFDDVNVYGNIYDSNIHHNRF 750
            DTPS N  I KPEC+S     +RYSA++ RLYLE+     RGGCVT+ QIWE   G      + PLYAV+P SG  S   TGTWLL E LYVEDGITL+V G  +GG ADELRL ST       + TYINLR +GGSLDF  TKVF WDT  N+ D D TDGRS+ISA+SE++ D TQ C G AK+ MGEARMDI +SEMGY+GF D ESYGLTWKVRGFCKD SNPE+FD VNVYGNIYDS +HH  F
Sbjct:  102 DTPSPNTPIPKPECNSTQAVSIRYSATTGRLYLEAGVEGERGGCVTVEQIWEARGGGTTTGAKAPLYAVDPVSGEYSDVITGTWLLEEDLYVEDGITLKVWGNGSGGYADELRLKSTPPTEDGGNGTYINLRAHGGSLDFEHTKVFGWDTTNNSYDMDETDGRSYISAVSEIVLDPTQTCEGNAKNTMGEARMDIVNSEMGYMGFHDSESYGLTWKVRGFCKDKSNPEVFDQVNVYGNIYDSELHHMNF 350
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11408.2934.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHA2_ECTSI9.520e-12671.77Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectoca... [more]
A0A6H5JU98_9PHAE2.460e-12572.18MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D7FXE4_ECTSI6.620e-12572.58Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
Q7XAK2_9PHAE2.180e-11870.85Mannuronan C-5-epimerase n=2 Tax=Laminaria digitat... [more]
Q7XAJ7_9PHAE1.130e-11772.27Mannuronan C-5-epimerase n=1 Tax=Laminaria digitat... [more]
Q7XAJ8_9PHAE5.380e-11574.01Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
A8CEP1_SACJA1.190e-11469.48Mannuronan C-5 epimerase n=1 Tax=Saccharina japoni... [more]
D7FXE5_ECTSI1.800e-11275.58Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G339_ECTSI9.280e-11173.54Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]
D8LD45_ECTSI4.270e-9763.05Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11408contigM-pyrifera_M_contig11408:48..7765 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score180.6
Seed ortholog evalue9e-43
Seed eggNOG ortholog2880.D7G8D9
KEGG rclassRC00467
KEGG koko:K15920
KEGG ReactionR01433
KEGG Pathwayko00520,ko01100,map00520,map01100
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein xylosyltransferase activity
EggNOG OGsKOG4157@1,KOG4157@2759
Ec32 ortholog descriptionMannuronan C-5-epimerase N-terminal fragment
Ec32 orthologEc-24_001130.1
EC3.2.1.37
COG Functional cat.U
CAZyGH3
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons4
Model size765
Cds size765
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11408.2934.1prot_M-pyrifera_M_contig11408.2934.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig11408 48..7765 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815656.104643-CDS-M-pyrifera_M_contig11408:47..1611622815656.104643-CDS-M-pyrifera_M_contig11408:47..161Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11408 48..161 -
1692277507.3772593-CDS-M-pyrifera_M_contig11408:47..1611692277507.3772593-CDS-M-pyrifera_M_contig11408:47..161Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11408 48..161 -
1622815656.1163805-CDS-M-pyrifera_M_contig11408:1396..16121622815656.1163805-CDS-M-pyrifera_M_contig11408:1396..1612Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11408 1397..1612 -
1692277507.392715-CDS-M-pyrifera_M_contig11408:1396..16121692277507.392715-CDS-M-pyrifera_M_contig11408:1396..1612Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11408 1397..1612 -
1622815656.1310725-CDS-M-pyrifera_M_contig11408:3226..33401622815656.1310725-CDS-M-pyrifera_M_contig11408:3226..3340Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11408 3227..3340 -
1692277507.402057-CDS-M-pyrifera_M_contig11408:3226..33401692277507.402057-CDS-M-pyrifera_M_contig11408:3226..3340Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11408 3227..3340 -
1622815656.1426163-CDS-M-pyrifera_M_contig11408:7444..77651622815656.1426163-CDS-M-pyrifera_M_contig11408:7444..7765Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11408 7445..7765 -
1692277507.4111326-CDS-M-pyrifera_M_contig11408:7444..77651692277507.4111326-CDS-M-pyrifera_M_contig11408:7444..7765Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11408 7445..7765 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig11408.2934.1

>prot_M-pyrifera_M_contig11408.2934.1 ID=prot_M-pyrifera_M_contig11408.2934.1|Name=mRNA_M-pyrifera_M_contig11408.2934.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=255bp
MSLFLASRRQVEAQDTPSRNDVIIKPECDSNARTLLRYSASSERLYLESA
DGITRGGCVTLTQIWEQLAGRVPLYAVEPGSGNVSTTATGTWLLTETLYV
EDGITLQVHGTSAGGDADELRLLSTSATYINLRGYGGSLDFVGTKVFAWD
TDINAVDEDVTDGRSFISAISEVITDETQACIGKAKSNMGEARMDIEDSE
MGYLGFQDGESYGLTWKVRGFCKDLSNPELFDDVNVYGNIYDSNIHHNRF
GENTN
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mRNA from alignment at M-pyrifera_M_contig11408:48..7765-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig11408.2934.1 ID=mRNA_M-pyrifera_M_contig11408.2934.1|Name=mRNA_M-pyrifera_M_contig11408.2934.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7718bp|location=Sequence derived from alignment at M-pyrifera_M_contig11408:48..7765- (Macrocystis pyrifera P11B4 male)
ATGAGCCTTTTTCTCGCTTCCAGGAGGCAAGTCGAGGCACAAGACACACC
TTCGCGGAACGATGTCATCATCAAACCCGAGTGCGACTCGAACGCGAGGA
CGCTGCTGAGGTATTCCGCGTCATCAGAAAGACTGTACCTCGAGTCGGCC
GACGGCATCACCCGAGGAGGTTGCGTAACACTAACTCAAATCTGGGAGCA
GCTGGCAGGTAGAGTGCCACTGTACGCGGTGGAGCCGGGCAGCGGCAACG
TGAGCACTACCGCGACAGGCACTTGGCTTCTCACCGAGACCCTCTATGTC
GAAGACGGTATTACTCTCCAGGTGAAGTGGTTTAATTTTCTGTGGTGGGC
GCTATCGATGTATGTGTGTGAGATGACACATCGCTCGTGTCTGTGTGTTT
CGAATGGCAGGATCTAGCAGCACAGAGCCTACACATGGGAAACCCGCACT
GCACGCCATGCTTTAGGCCAGCGCAAGATTGGCCATCGAATACATAAATG
TTACTGCACGAAGACAGACAAAATACACCTGCTACGTATGATACTATTAA
TAGATACGTAGACTGTTCCATTGGGCGTGTATGTTTTTTTTTGTCCATCA
ATACTACTATTAATGTAATAGTATACTCGTCTGTGGCCTTTCTGATCTTT
TTGCTTCCTTTGTATTATGTTTCATTTATGATTTTTTTCAATTTCGTCTT
CATTACCTTTTCGTTTTTTTTACTGATCTGGCTGTTGTTGTGTTATCGTA
TCCGGTACGTTCGCATTTCATTTTGCTTTTATATTAATTCGATTCGGTAT
TATTTCTAGTGAGGCTTTTCTCTGTCTCACAGCTTGTGAATACACAACTT
GAATATCTCTCGGACAACAAGTATTAGGGAGATACACTGGGTGCAGGCAG
CGATGTAGTTGGGTAGAAAGGACGGTTTCACGTGAAGACAAACACACAAC
GCATTACACGATACACCGCTGGATAGCTGGAGCATGTTCACCAAGGGAGA
ACTGGCGCCGTCAGCCAGGAGCGTAGGGCCGATTGTTCCTCACCTTAGCA
TAGTTTCAGTGAAGTCACACAGGGGCATTTATTTTTATTTTTCTTATCCT
CCGGCGGATTGTTAAAAACAGTTCTTAAGCTCACCACACTTCCACATTCA
AAATTCGTGTCAATTTAACAATTGAACCCATAGTTCCCGTTGCAACATCG
GCATAGTCTGTTGTTGCCCCTGGGGCTAGGGCATTTTGACCCGACCTGAC
GCCGGAGAGGGGCAGGTGCGGTGGAGACAGCCACCCAGGAGATTAACCTC
CTCTGGGTAGTGTGAGACTTGCGCAAGCTGACCCACTAACAAAAACCTAG
TTTATGAGACCTCCCCGCCAGACTAGGTCCAGTTACGGTCCAATCTACCC
GTTGGGGCGTTGGTCTTCAAATTTAGTGTTTATCGTCACAAGAGGCGAAA
ATTTTCTCTCCCGCCATCCTTGAAGTATTCTGCAGCAGTGTAAAGATCAT
TGTCGCGCGTAAACTACTATGCCTTTTGTGAAGTACCTGGCGTGAAATAC
TGTAGGAGATTTTGTGAAGTACCAGGCAAGTGAATACGCACGATATGATG
CATCATGGTGTACTATATGTGCGAGTGCTGGTATCTCGCTACAGAAACGG
CCGTAAAAGACGGCATCATCATCAGGTGCCGTACCCGGATAGTAATGTAC
CTGTTGTGGTGCACTGTATATACTATATACTGTATGTATACTGCATGACG
TAACTAACTGGTGTCTGTGTATGGAAACAGGAACGCTGGCCGAGACTGGC
GCCCTAAAAAAAAGCGCGTGGTACGGAGCAAAGAGTCTGTTTCCATCCTC
TGACTATTAACAGAGGTAGATATATGGCTACGTAATCCACCTCTAATGCA
TGGCACTGCTGACAAACTGGTGTTTCGGGTTGGGGTACGAGACATGTTTT
TCCCCCGAGGCTCCATAAAGAACGAGGAGCTCCATAAAGTGCTGAACTAT
TTTCGGGACAATATGATACGGCAAGTACCACGGTGGGAAGGGGGAAGAAG
AATCCAGTGCCTGACCGCTGAGCTGAGTGCCTACTAATATACACGGTATG
AGCAAGCCGGAGCAAGAAAGAGGCGCGAAGGTAGCAAATGGGATGGACAA
AAATAACACTTACGGTACACAATAATACCGGTACAACATACACCTCACCG
AACAACAAAATTTGAGAGGGTCTTTTACATGCGCTCAGCCGGATAAGCGA
TCCGATAGCCTGGTAACGTACGAAACGAAACACGTATTGCGATAAACTAC
TACGGCTGTAGGTATACATTGGGACAATGGGAACCCCAACGATAGCGCTG
GGTACATACATACATACCTTACAGGCCTTTGAGTCCGCACAGGAGTGCCA
TCGTTTGTAAGCGCCCCGATTTTTCCGGAACGGCAAGGTTGCCAGCACGA
AGGCACCGGGCATATGGTGCCGGGTACCGGGCAAGATCTTTTTTTCTCGG
GAATATCTGGTCGAGAACCTTCCGAAAATATACTACAGTATTCAACTTTA
GACATCTTTAATTAATTAACCTTGTCGAGAGCACGAGCACTGAAAAACGA
TCGCGGCCCTGTACGAACTCCTCGCTGTTCACGGTATGATAGTTCCTCCT
TTCAGAATCCCCCCTACCCCCCCTCCCCTTCGATCACTTTTTTTTCGTCA
AAAGAGTGCAATGTTTACCCACCCCTCGTTGTGATATAACACGCGCTCGA
CATGTCTCATAATGTAGTCGTTGTATGGTCGGCCCAGCCCATTGATGGGA
TCGATGGGATTGATGACCCACACTCTCTGGCGGGGGTGCGCCTGTAATAT
ATCTTATTAATAGTGGGTTATTTTGTGTCACCCAAGAGATTCTGTGTATA
ACATACACATATCATCCAACAAAAACATTCATAAATATATACATATCACC
CAAAAAAACATCCCCGAGAAAAAAGGTGCGCTCGAAACCTCTCTTTGGGA
CCCCGATACAGCGAATGCAACAACTAAAATATTGGCCATTTCGTCAACAT
TTCTTTATATACGCACTGACAGCGTGAGCGCAGAGCAGCACGGTAGGATC
ATGTCGCGCCCGCGCCGTACATTTCTCTTTGCAGTATATCTCGGACACCG
CTTCGTACCTTCCCTCGATCACTGCGGTGGCTGTTTCTGTAATTGGTCCA
CTTGTTCCATCGCTTTTCCCCTCACAAGTTCCAACAGGGCAAGCCCGACC
CGCAACCCCACGGACTCGCAAGCTTCTATCGAGACGTGCACGTACAGTAG
TAAAGCCAGACGGGTTTGAGAACGTGCCTCCCCGCTTGACAATCCACTTG
GTTATAAATATGCCGGCGTAGAAAGTGTTACCCCTGTTCTATTCATAGTC
AAACCCACCTACATCATGGAGTTGCGGACATCACATAAGTTGTCGGTTTG
GAAGGGGGGTTGTGGCAGGCGGTGTAGCGCTCCTCGCAAACCATTGCCGG
GCACCAGTCTGTACTACTCCCGATTGTGTATCATATACATTGCGTGTTTC
GTGAATAAAAAATAATGAATACCTTGAACGAACCAAGTCAGCGATGTAGC
AACGGAAGTCACGAAAGCTCGCAGCAACACGTGTGCCTATAGAATGCCAA
TGATGACGTATCACAGCCCATTGATTCCACCTTTAACCGCCTCCACTCCC
ATTGTATACCGTGGCAGGTGCCGTACAACCAACGACACAACCAGTCGCAA
TCTCTGCTTCGTACGTATATGTATGTATGCCGGGATTTAGTTACTACGGG
GGTCCATAGTTAACAGGACCTATGGTGTACATAAAAACCTATATATTTAA
CTTTTTTTACTGACAATATTTGGTCCTATTTACTATCGTCCCCCGTAATA
GTTGGACGAGAATACTGTAGATAGATAATGCACCCCCTCTATCTTGACTG
AGTCAGGTTTCGTGTTCCCTTGCGAGCCTCAGACTTCATTTTCCTCGAGC
AGCAAGCAGTACTCCAGAATACTTGCAAAACACTGGACGTACGATATCAT
AAAATAAGAGTAATTGAGATAGACATTTTGTTGCAGGTGTCCTACAGTCT
ACACTGGGAAGGATTCATCTTCTACGCGAGTGAGTACATCTGCATGGGTG
CAGGTGGTAGTGGTAGCAGCAGCCGGTTCTGCTGTTGCAACGGGAGCGGC
AGGTTAAATTGACACACGGCACGGACTCTCAACGCGGGAGTGTGGTGAGC
TTAAGCCACATTTCTACCAATCCGCTGGAAGATACAAACAGTACGAAGTA
CATGATCAAAATATGTACTGGTAGTTGACTAGTAACTTATGCACGCGCCT
GTGAACTTTCCAACAAACTAATCTTGCCCATATGTTCCGCCAACTGCCTC
TTCGTCCCTGCTTTCTCGTCACCAGGTGCACGGTACCTCTGCCGGGGGTG
ACGCGGACGAGCTGCGTTTGTTGAGCACGAGTGCAACTTACATCAACTTG
CGTGGCTACGGTGGGAGCCTGGATTTCGTAGGCACCAAGGTCGGTCCGGA
TTGGTTTCGTGGTCGGACGTTTTGTTACTGCTGGGTGTATGTGTAGAGTA
GGACGAGCAAACCGTTGTGTCAATTGTCGGGTCTCCCCAACGCCTCTTCA
TCAAGGCGTATTTTTGCGCACCAGCAGTATGAGTGCCGGTCAACAGCAAT
ATGAGTGCTGGTATTTTCTGAACCGGAAGGGAGCATGTCGATGGGCAGTG
TTCGGTGTTTTAAAACGACCTTTTGACAGGTAGACGTGTATTTGTTTCTA
AGGCGTGTGCATAACACAAAGCCGGGCTCACACGACAGGATAGGCTCATA
CGCCAATTTTACAACCCGTGCTCGGGGGATCCGCCTTGTTCCAGTTTTTC
ATGGCACTACCTCATGACCGTGCCTATAGCGCTTTCACGACGATGCCATT
TACTGGAGTCTTGACGTATCGTTCACCATGAAATTACTTTAATAAAGTTC
ACGAACTACCATGGTCAGTCACAACATCAACGAGCAACGCCTTCTAGGGG
CGGAGGCTCTTTTGCTGGGGTCTCATCTCACACTCTCACACGAGGAGGTT
AACATTTCACCCAGAGGCGTTTTGCAATAGAGGTTTACCCTAATTTTTCT
GAGGCTCCTTGCTTACTTAAGGAGCTCCATACCTCACCCAAACACTGACT
TAAGCAAAAATCAAATTGCATCGCGATGAATAATCCCATGGCCCAAATTT
ACGAAAGGTCATTTTCGAAACAAGACTAGTATACCGATGATTTGGGGTTA
AGGAACCCCGTCAATTTAGAAAACAAATGAAGGAAATGTGCTACGTCTAT
CGCAGAACCCGTCCCCAACTCGTTACACCGGAGAAATGTGTTCGCGCAAT
CCGACCGACACTCCTATGCTCTAGTTCTCATACAAATGTACTGGCGTAAC
GGTATGATACAAGCCGATGAACTATTATATTAGTTGCCCACTTCGGGACC
TCAACCGGTCAGACGATGTTGCCTTTAAGGCAAAACGTGTGACCCCTACC
GTGGGATGCGTCCGACCGCTCTTAACTATGAATACGCCCTGTGGAGGGGA
CACGGGAAGTCCCAAGGCATCGCTATGGGAGTATCACTGCCGTGATAGTA
TGGCGCTGGCAACCGTGGATTAGCAATGGCATGATCGTTGAAAGGATTGC
AACGCCCCGGTGGTCTAGTGGTTAACCTCGAATACTACTGGACGATCCTG
AGGACGCGGGCGACACATCAAGTGGGCTGAATAACTAATAGACGTCGCAG
AGTAACCAGAGTACACCGATGTGTATTTATTTAAGAAATACCCACAAGGC
AACAGTAGTCGTCACGTTCATGTCCCTGCTATATATTGTGTTTTGCCGTA
GCGCCTAGGCTCGCGGTCTTTGACTCACTATGTCTTGCGGTACATTTGGG
GTATAGTGTTAGCCCCCCACTCGCGCTCCCTGAACACGCCTTTCTCGTCA
TGTATAGACCCGGTCTTCGGTTCTTGGGCTGACTGCTGTGGTGCCTAAAA
ATGTTGAACATGTGTACTGGCTTTTCATGAGACACCCTGCCTAAGGTGAC
GTACCCACATGGTATCGTCGTATTGTCGTTACACCTCCGCCCCCGCTCCT
TAGGTGTTCGCCTGGGACACTGACATCAACGCCGTCGACGAAGACGTAAC
AGATGGGCGGTCGTTCATCAGCGCGATCTCGGAGGTCATCACCGACGAAA
CACAGGCGTGCATCGGAAAAGCCAAGAGCAACATGGGAGAGGCGCGCATG
GACATCGAGGACAGCGAGATGGGGTATCTTGGATTCCAGGACGGCGAGAG
CTACGGTCTCACATGGAAGGTAGGGGGGTCTATCACATTTTCGCTGGATG
ATGACTTGTACCAGTACAACATTGTGAATACTAGTTCTTATTCCGACGTT
TTCTGGCAGATAGTCTGTCTCAGTTAGCCTTGTGGGAAATATATAGCAGG
GTAGGTTTTCAGGATCAAGGAGGCATACACCTAGATAGGACTTTTACGTA
TTTATGTTCCCATGCACGGGACCCCCCTCCCCTTTCAATATAATAGTATC
AAGATGGGCGCAAGGGAAGCATTCTCCTGTAAGAACCCTTTCGGAGCGTC
ACACAATCACGCAAACCACAGAATGTACGCCATTTTTTTTTTTTTTCCAT
TGACAGACGTTATTTGCACCATGTTAGGACGTGAACAGTGACTCAACGTC
CGAGGACCTTAACCCTGTTTGACGTTCCAGACAGTGCTTATAACGCCTGA
ATGTAGGCTTCTTTTCAATAAGAACTCCACTTGCCGGGGTTTTCTTCACC
CGTGTGGAGCAGGCGCCCTACGGGTTGTAGAGCGGACGTGTGTTTGTGTG
AAAGGGGATCGATCGCGCTGCGATTTAACGTGAGAATGAACTGGAGTGTT
CTTGTCTCCTGCGCTACAGTGCAAGCCCTGAATCTAATTTGTCTTGAAGC
CCTTTCTAAAATAACACGGCTCGTAATATGCAGCTAGTGTACTCCGTACT
GCCAGTGTTGTGTCGAACATTTGGTGCTGAATTATTGGACGAACGGTGCT
CTCTTCGCAATCTTTCGAACGAGCAATCAAACATAGATAGTACGTTGGTG
CTGTGAGGTACGGCATTCGCTGGGTTTTTTTCCTAGAACACGACGTTGTC
GAGACCTTCGAATTACTCCCACTCACTTTTGCTCGAGTCTTTAAGAATTA
CTAGTCTCTTGTTTTTTTGCTATGGCATTCAAATCGATTCCGGGCCCACT
TTGGAGGGCTCAAGCGCGGGTGGGACCAGGTCCGCGTAGGACCGGGGGGA
GTAGACAGGAGCAGGCTGCTGAGTGCGTGCGTTCTCTTATTGTAGCGTTT
GTCGGTACCTTTCTTAAGCGAAACACCTGCGAAGACGTAACGTCTGTTTG
AGGTTGAATGCCCACTTCTTCCCACCACGTTGCTGCCGGAAATAGACCCA
AGTACCGCAGCGCTCCAGGATGCATCGACTATTGTTTTCTCGCGGTCCCA
CCCCCGTCTTGGCAAACGCTCCTGAACGATACCCGAATCACACATCTGCC
CCAGGTGCGAGGGTTCTGCAAGGACCTGAGTAACCCCGAGCTGTTCGACG
ATGTCAACGTCTACGGCAACATCTACGACTCGAACATCCACCACAACCGT
TTTGGGGAGAACACGAAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig11408:48..7765-

>mRNA_M-pyrifera_M_contig11408.2934.1 ID=mRNA_M-pyrifera_M_contig11408.2934.1|Name=mRNA_M-pyrifera_M_contig11408.2934.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1530bp|location=Sequence derived from alignment at M-pyrifera_M_contig11408:48..7765- (Macrocystis pyrifera P11B4 male)
ATGAGCCTTTTTCTCGCTTCCAGGAGGCAAGTCGAGGCACAAGACACACC
TTCGCGGAACGATGTCATCATCAAACCCGAGTGCGACTCGAACGCGAGGA
CGCTGCTGAGGTATTCCGCGTCATCAGAAAGACTGTACCTCGAGTCGGCC
GACGGCATCACCCGAGGAGGTTGCGTAACACTAACTCAAATCTGGGAGCA
GCTGGCAGGTAGAGTGCCACTGTACGCGGTGGAGCCGGGCAGCGGCAACG
TGAGCACTACCGCGACAGGCACTTGGCTTCTCACCGAGACCCTCTATGTC
GAAGACGGTATTACTCTCCAGATGAGCCTTTTTCTCGCTTCCAGGAGGCA
AGTCGAGGCACAAGACACACCTTCGCGGAACGATGTCATCATCAAACCCG
AGTGCGACTCGAACGCGAGGACGCTGCTGAGGTATTCCGCGTCATCAGAA
AGACTGTACCTCGAGTCGGCCGACGGCATCACCCGAGGAGGTTGCGTAAC
ACTAACTCAAATCTGGGAGCAGCTGGCAGGTAGAGTGCCACTGTACGCGG
TGGAGCCGGGCAGCGGCAACGTGAGCACTACCGCGACAGGCACTTGGCTT
CTCACCGAGACCCTCTATGTCGAAGACGGTATTACTCTCCAGGTGCACGG
TACCTCTGCCGGGGGTGACGCGGACGAGCTGCGTTTGTTGAGCACGAGTG
CAACTTACATCAACTTGCGTGGCTACGGTGGGAGCCTGGATTTCGTAGGC
ACCAAGGTGCACGGTACCTCTGCCGGGGGTGACGCGGACGAGCTGCGTTT
GTTGAGCACGAGTGCAACTTACATCAACTTGCGTGGCTACGGTGGGAGCC
TGGATTTCGTAGGCACCAAGGTGTTCGCCTGGGACACTGACATCAACGCC
GTCGACGAAGACGTAACAGATGGGCGGTCGTTCATCAGCGCGATCTCGGA
GGTCATCACCGACGAAACACAGGCGTGCATCGGAAAAGCCAAGAGCAACA
TGGGAGAGGCGCGCATGGACATCGAGGACAGCGAGATGGGGTATCTTGGA
TTCCAGGACGGCGAGAGCTACGGTCTCACATGGAAGGTGTTCGCCTGGGA
CACTGACATCAACGCCGTCGACGAAGACGTAACAGATGGGCGGTCGTTCA
TCAGCGCGATCTCGGAGGTCATCACCGACGAAACACAGGCGTGCATCGGA
AAAGCCAAGAGCAACATGGGAGAGGCGCGCATGGACATCGAGGACAGCGA
GATGGGGTATCTTGGATTCCAGGACGGCGAGAGCTACGGTCTCACATGGA
AGGTGCGAGGGTTCTGCAAGGACCTGAGTAACCCCGAGCTGTTCGACGAT
GTCAACGTCTACGGCAACATCTACGACTCGAACATCCACCACAACCGTTT
TGGGGAGAACACGAACGTGCGAGGGTTCTGCAAGGACCTGAGTAACCCCG
AGCTGTTCGACGATGTCAACGTCTACGGCAACATCTACGACTCGAACATC
CACCACAACCGTTTTGGGGAGAACACGAAC
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