mRNA_M-pyrifera_M_contig114027.2918.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig114027.2918.1 vs. uniprot
Match: A0A6I6A7Q7_9PLAN (PQQ-binding-like beta-propeller repeat protein n=8 Tax=Gimesia TaxID=1649453 RepID=A0A6I6A7Q7_9PLAN) HSP 1 Score: 378 bits (970), Expect = 1.070e-125 Identity = 184/191 (96.34%), Postives = 187/191 (97.91%), Query Frame = 1
Query: 1 PAFPIEHKGQKLVVGYLENALVIHDLQTGELLLEHELSEGYDEHSAWPLYREPYLWLAAPFRSGSQLLELPDQFPHSEPLKIVWRSRVMSNDVLSSVLVDGRIYGFDIFDQQSKTQRPSRGKFRCIDFLTGKELWEQGSGRPERSNNDISDELGQSGIIVADGKLILLNERGKLILLRQNPEQCEILARCS 573
PAFPIE KGQKLVVGYLENALVIHDLQTGELLLEHELSEGYDEHSAWPLYREPYLWLAAPFRSGSQLLELPDQFPH EPLK VWRSRVMSNDVLSSVLVDGRIYGFDIFDQQSKTQRPSRGKFRCIDFLTG+ELWEQGSGRPERS NDISDELGQSGIIVADGKLILLNERG+LILLRQNPEQC+ILARCS
Sbjct: 239 PAFPIERKGQKLVVGYLENALVIHDLQTGELLLEHELSEGYDEHSAWPLYREPYLWLAAPFRSGSQLLELPDQFPHLEPLKTVWRSRVMSNDVLSSVLVDGRIYGFDIFDQQSKTQRPSRGKFRCIDFLTGEELWEQGSGRPERSTNDISDELGQSGIIVADGKLILLNERGELILLRQNPEQCDILARCS 429
BLAST of mRNA_M-pyrifera_M_contig114027.2918.1 vs. uniprot
Match: A0A518A3R7_9PLAN (Outer membrane biogenesis protein BamB n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A3R7_9PLAN) HSP 1 Score: 353 bits (906), Expect = 4.400e-116 Identity = 170/191 (89.01%), Postives = 183/191 (95.81%), Query Frame = 1
Query: 1 PAFPIEHKGQKLVVGYLENALVIHDLQTGELLLEHELSEGYDEHSAWPLYREPYLWLAAPFRSGSQLLELPDQFPHSEPLKIVWRSRVMSNDVLSSVLVDGRIYGFDIFDQQSKTQRPSRGKFRCIDFLTGKELWEQGSGRPERSNNDISDELGQSGIIVADGKLILLNERGKLILLRQNPEQCEILARCS 573
PA PIE G+KLVVGYLENALVIHDLQTG +LLEHELSEGYDEHSAWPLYREPYLW+AAPFRSGSQL ELPD+FPHSE LK VWRSRVMSNDVLSSVLV+ +IYGFDIFDQQSKTQRPSRGKFRCI+FLTGKELWEQGSGRPERSNNDI++ELGQSGIIVADGKLILLNERG+LILLRQNPE+CEIL+RC+
Sbjct: 239 PALPIERNGRKLVVGYLENALVIHDLQTGAVLLEHELSEGYDEHSAWPLYREPYLWIAAPFRSGSQLFELPDRFPHSELLKTVWRSRVMSNDVLSSVLVNEQIYGFDIFDQQSKTQRPSRGKFRCIEFLTGKELWEQGSGRPERSNNDITNELGQSGIIVADGKLILLNERGELILLRQNPERCEILSRCN 429
BLAST of mRNA_M-pyrifera_M_contig114027.2918.1 vs. uniprot
Match: A0A517VB11_9PLAN (Outer membrane biogenesis protein BamB n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517VB11_9PLAN) HSP 1 Score: 326 bits (836), Expect = 1.280e-105 Identity = 155/191 (81.15%), Postives = 173/191 (90.58%), Query Frame = 1
Query: 1 PAFPIEHKGQKLVVGYLENALVIHDLQTGELLLEHELSEGYDEHSAWPLYREPYLWLAAPFRSGSQLLELPDQFPHSEPLKIVWRSRVMSNDVLSSVLVDGRIYGFDIFDQQSKTQRPSRGKFRCIDFLTGKELWEQGSGRPERSNNDISDELGQSGIIVADGKLILLNERGKLILLRQNPEQCEILARCS 573
PA PI KG+KL+VGYLENALV+HDL+TGELLLE ELS+GYDEHS+WP+YREPYLW+AAPFR+GSQL E+P +F LK +WRSR +SNDVLSSVLV +IYGFDIFDQQSKTQRPSRGKFRCIDFLTG ELWEQGSGRPERSNNDI+DE+GQ+GIIVAD KLILLNERG+LILLR NPEQCEILARCS
Sbjct: 238 PAMPITRKGRKLIVGYLENALVLHDLKTGELLLEQELSDGYDEHSSWPIYREPYLWIAAPFRAGSQLFEIPAKFDKETTLKNIWRSRTLSNDVLSSVLVGDQIYGFDIFDQQSKTQRPSRGKFRCIDFLTGNELWEQGSGRPERSNNDIADEIGQAGIIVADDKLILLNERGELILLRINPEQCEILARCS 428
BLAST of mRNA_M-pyrifera_M_contig114027.2918.1 vs. uniprot
Match: A6CBA8_9PLAN (Uncharacterized protein n=6 Tax=Gimesia TaxID=1649453 RepID=A6CBA8_9PLAN) HSP 1 Score: 325 bits (832), Expect = 5.880e-105 Identity = 153/191 (80.10%), Postives = 172/191 (90.05%), Query Frame = 1
Query: 1 PAFPIEHKGQKLVVGYLENALVIHDLQTGELLLEHELSEGYDEHSAWPLYREPYLWLAAPFRSGSQLLELPDQFPHSEPLKIVWRSRVMSNDVLSSVLVDGRIYGFDIFDQQSKTQRPSRGKFRCIDFLTGKELWEQGSGRPERSNNDISDELGQSGIIVADGKLILLNERGKLILLRQNPEQCEILARCS 573
PA PI G+KL+VGYLENALV+HDL+TGELLLEH+LSEGYDEHS+WPLYREPYLW+AAPFRSGSQL E+P +F LK +WRSR+++NDVLSSVLV +IYGFDIFDQQSKTQRPSRGKFRCIDFLTG ELWEQGSGRPERS ND SDE+GQ+GIIVAD KLILLNERG+LILLR NPE+C+ILARCS
Sbjct: 244 PAMPIVRNGRKLIVGYLENALVLHDLKTGELLLEHDLSEGYDEHSSWPLYREPYLWIAAPFRSGSQLFEIPAEFEKGATLKTIWRSRILANDVLSSVLVGDQIYGFDIFDQQSKTQRPSRGKFRCIDFLTGNELWEQGSGRPERSTNDTSDEIGQAGIIVADDKLILLNERGELILLRINPEECDILARCS 434
BLAST of mRNA_M-pyrifera_M_contig114027.2918.1 vs. uniprot
Match: A0A518I9J7_9PLAN (Outer membrane biogenesis protein BamB n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518I9J7_9PLAN) HSP 1 Score: 322 bits (824), Expect = 8.150e-104 Identity = 150/190 (78.95%), Postives = 171/190 (90.00%), Query Frame = 1
Query: 1 PAFPIEHKGQKLVVGYLENALVIHDLQTGELLLEHELSEGYDEHSAWPLYREPYLWLAAPFRSGSQLLELPDQFPHSEPLKIVWRSRVMSNDVLSSVLVDGRIYGFDIFDQQSKTQRPSRGKFRCIDFLTGKELWEQGSGRPERSNNDISDELGQSGIIVADGKLILLNERGKLILLRQNPEQCEILARC 570
PA PI G++L++GYLENA+VIHD ++GE+LLEHELS+GYDEHSAWP+YREPYLW+AAPF+SGSQL ELP++ PLK +WRSR +SNDVLSSVLV +IYGFDIFDQQSKTQRPSRGKFRCIDF+TGKELWEQGSGRPERSNND SDELGQ+GII ADGKLIL NERG+LILLR NPE+CEILARC
Sbjct: 239 PAMPIVRNGRQLILGYLENAVVIHDFKSGEVLLEHELSQGYDEHSAWPIYREPYLWIAAPFKSGSQLFELPEELSPQVPLKNIWRSRTLSNDVLSSVLVGEQIYGFDIFDQQSKTQRPSRGKFRCIDFMTGKELWEQGSGRPERSNNDTSDELGQAGIIAADGKLILFNERGELILLRANPERCEILARC 428
BLAST of mRNA_M-pyrifera_M_contig114027.2918.1 vs. uniprot
Match: A0A355G7X1_9PLAN (Uncharacterized protein n=2 Tax=Planctomycetaceae TaxID=126 RepID=A0A355G7X1_9PLAN) HSP 1 Score: 321 bits (822), Expect = 2.180e-103 Identity = 152/191 (79.58%), Postives = 171/191 (89.53%), Query Frame = 1
Query: 1 PAFPIEHKGQKLVVGYLENALVIHDLQTGELLLEHELSEGYDEHSAWPLYREPYLWLAAPFRSGSQLLELPDQFPHSEPLKIVWRSRVMSNDVLSSVLVDGRIYGFDIFDQQSKTQRPSRGKFRCIDFLTGKELWEQGSGRPERSNNDISDELGQSGIIVADGKLILLNERGKLILLRQNPEQCEILARCS 573
PA PI G+KLVVGYLENALV+HDL+TGELLLEHELS+GYDEHS+WPLYREPYLW+AAPFR+GSQL E+P +F LK +WRSR++SNDVLSSVLV +IYGFDIFDQQSKTQRPSRGKFRCI+FLTG ELWEQGSGRPERS ND SDE+GQ+GIIVAD KLI+LNERG+LILLR NP +CEILARCS
Sbjct: 251 PAMPITRDGRKLVVGYLENALVLHDLKTGELLLEHELSDGYDEHSSWPLYREPYLWIAAPFRAGSQLFEIPSEFEKDTRLKNIWRSRILSNDVLSSVLVGDQIYGFDIFDQQSKTQRPSRGKFRCIEFLTGDELWEQGSGRPERSQNDTSDEIGQAGIIVADDKLIMLNERGELILLRINPAECEILARCS 441
BLAST of mRNA_M-pyrifera_M_contig114027.2918.1 vs. uniprot
Match: A0A3D4PCB0_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3D4PCB0_9PLAN) HSP 1 Score: 312 bits (799), Expect = 2.550e-103 Identity = 147/190 (77.37%), Postives = 169/190 (88.95%), Query Frame = 1
Query: 1 PAFPIEHKGQKLVVGYLENALVIHDLQTGELLLEHELSEGYDEHSAWPLYREPYLWLAAPFRSGSQLLELPDQFPHSEPLKIVWRSRVMSNDVLSSVLVDGRIYGFDIFDQQSKTQRPSRGKFRCIDFLTGKELWEQGSGRPERSNNDISDELGQSGIIVADGKLILLNERGKLILLRQNPEQCEILARC 570
P PI G++LVVGYLENALVIHDL+TGELL+ ELS GYDEHSAWPLYREPYLW+AAPF++GSQLLE+P++F LKIVWRS+ +SNDVLSSVLVD IYGFDIFD QSKTQRPSRGKFRC+ FLTG+ELWEQGSG+P+RSNNDIS+E+GQSGI+VADGKLI+LNERG+LILLR N E+CEIL RC
Sbjct: 157 PVMPIVRNGRQLVVGYLENALVIHDLKTGELLINMELSHGYDEHSAWPLYREPYLWIAAPFQAGSQLLEIPEEFSGQSSLKIVWRSKTLSNDVLSSVLVDDAIYGFDIFDPQSKTQRPSRGKFRCVAFLTGEELWEQGSGKPQRSNNDISEEIGQSGIVVADGKLIMLNERGELILLRPNRERCEILDRC 346
BLAST of mRNA_M-pyrifera_M_contig114027.2918.1 vs. uniprot
Match: A0A517RCW1_9PLAN (Outer membrane biogenesis protein BamB n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RCW1_9PLAN) HSP 1 Score: 318 bits (816), Expect = 1.280e-102 Identity = 150/191 (78.53%), Postives = 171/191 (89.53%), Query Frame = 1
Query: 1 PAFPIEHKGQKLVVGYLENALVIHDLQTGELLLEHELSEGYDEHSAWPLYREPYLWLAAPFRSGSQLLELPDQFPHSEPLKIVWRSRVMSNDVLSSVLVDGRIYGFDIFDQQSKTQRPSRGKFRCIDFLTGKELWEQGSGRPERSNNDISDELGQSGIIVADGKLILLNERGKLILLRQNPEQCEILARCS 573
PA P+ G++LV+GYLENA+VIHDL++GELLLEHELS+GYDEHSAWP+YREPYLW+AAPF+SGSQL ELP+++ LK +WRSR +SNDVLSSVLV ++YGFDIFDQQSKTQRPSRGKFRCI+F+TG ELWEQGSGRPERSNND SDELGQ+GIIVADGKLIL NERG LILLR NP QCEILARCS
Sbjct: 239 PAMPLVRNGRQLVLGYLENAIVIHDLKSGELLLEHELSQGYDEHSAWPIYREPYLWVAAPFKSGSQLFELPEEWGLQRSLKNIWRSRTLSNDVLSSVLVGDQLYGFDIFDQQSKTQRPSRGKFRCIEFMTGTELWEQGSGRPERSNNDTSDELGQAGIIVADGKLILCNERGDLILLRANPNQCEILARCS 429
BLAST of mRNA_M-pyrifera_M_contig114027.2918.1 vs. uniprot
Match: A0A5C5XJ93_9PLAN (Outer membrane biogenesis protein BamB n=3 Tax=Planctomycetaceae TaxID=126 RepID=A0A5C5XJ93_9PLAN) HSP 1 Score: 307 bits (786), Expect = 2.740e-98 Identity = 145/190 (76.32%), Postives = 166/190 (87.37%), Query Frame = 1
Query: 1 PAFPIEHKGQKLVVGYLENALVIHDLQTGELLLEHELSEGYDEHSAWPLYREPYLWLAAPFRSGSQLLELPDQFPHSEPLKIVWRSRVMSNDVLSSVLVDGRIYGFDIFDQQSKTQRPSRGKFRCIDFLTGKELWEQGSGRPERSNNDISDELGQSGIIVADGKLILLNERGKLILLRQNPEQCEILARC 570
P PI+ G++LVVGYLENALVIHDL+TGELL+ ELS GYDEHSAWPLYREPYLW+AAPF++GSQLLE+P+ F LK VWRS+ +SNDVLSSV VDG IYGFDIFD QSKTQRPSRGKFRC+DFLTG+ELW QGSG+P+RSNNDIS+E+GQSGI+VA GKLILLNERG+LILLR + E CEIL RC
Sbjct: 225 PVMPIDRNGRQLVVGYLENALVIHDLKTGELLINMELSHGYDEHSAWPLYREPYLWIAAPFQAGSQLLEIPEDFSGQPTLKTVWRSKTLSNDVLSSVFVDGAIYGFDIFDPQSKTQRPSRGKFRCVDFLTGEELWGQGSGKPQRSNNDISEEIGQSGIVVAVGKLILLNERGELILLRPSRENCEILDRC 414
BLAST of mRNA_M-pyrifera_M_contig114027.2918.1 vs. uniprot
Match: UPI001EE951C8 (PQQ-binding-like beta-propeller repeat protein n=1 Tax=Rubinisphaera sp. ICM_H10 TaxID=2909586 RepID=UPI001EE951C8) HSP 1 Score: 303 bits (775), Expect = 1.170e-96 Identity = 144/190 (75.79%), Postives = 165/190 (86.84%), Query Frame = 1
Query: 1 PAFPIEHKGQKLVVGYLENALVIHDLQTGELLLEHELSEGYDEHSAWPLYREPYLWLAAPFRSGSQLLELPDQFPHSEPLKIVWRSRVMSNDVLSSVLVDGRIYGFDIFDQQSKTQRPSRGKFRCIDFLTGKELWEQGSGRPERSNNDISDELGQSGIIVADGKLILLNERGKLILLRQNPEQCEILARC 570
PA PI G+ LVVGYLENALVIHDL+TGELL ELS GYDEHSAWP+YREP LW+AAPF++GSQLLE+ D F + K VWRS+ +SNDVLSSVLVDG +YGFDIFD Q+KTQRPSRGKFRC+DFLTG+ELWEQGSG+P+RSNNDIS+ELGQSGI+VADGKLIL NERG+LILLR N E+C+I ARC
Sbjct: 224 PAMPITRGGRDLVVGYLENALVIHDLRTGELLSHMELSHGYDEHSAWPIYREPLLWIAAPFQAGSQLLEISDDFTQTAIPKTVWRSKTLSNDVLSSVLVDGALYGFDIFDPQAKTQRPSRGKFRCVDFLTGEELWEQGSGKPQRSNNDISEELGQSGIVVADGKLILFNERGELILLRPNRERCDIQARC 413 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114027.2918.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig114027.2918.1 >prot_M-pyrifera_M_contig114027.2918.1 ID=prot_M-pyrifera_M_contig114027.2918.1|Name=mRNA_M-pyrifera_M_contig114027.2918.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=191bp PAFPIEHKGQKLVVGYLENALVIHDLQTGELLLEHELSEGYDEHSAWPLYback to top mRNA from alignment at M-pyrifera_M_contig114027:2..574- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig114027.2918.1 ID=mRNA_M-pyrifera_M_contig114027.2918.1|Name=mRNA_M-pyrifera_M_contig114027.2918.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=573bp|location=Sequence derived from alignment at M-pyrifera_M_contig114027:2..574- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig114027:2..574- >mRNA_M-pyrifera_M_contig114027.2918.1 ID=mRNA_M-pyrifera_M_contig114027.2918.1|Name=mRNA_M-pyrifera_M_contig114027.2918.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1146bp|location=Sequence derived from alignment at M-pyrifera_M_contig114027:2..574- (Macrocystis pyrifera P11B4 male)back to top |