mRNA_M-pyrifera_M_contig113816.2862.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig113816.2862.1 vs. uniprot
Match: A0A7S4HL09_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HL09_9EUKA) HSP 1 Score: 150 bits (378), Expect = 1.560e-40 Identity = 88/155 (56.77%), Postives = 113/155 (72.90%), Query Frame = 1
Query: 37 REERRELELT-NAVITSQDEAAKGMSKGDLEKRQRAFDEKKAKLKNPNFFVSRTRLSVRNVPRNVTESQLKEIFAS-SVQGRKLHLHQVKIVKDQTRVDDK-GKAKSKGYGFVEFKKHHDALAALRALNNHPKIFEAQRRPIVEFALENAQIMRK 492
+E++R L L VIT QDEA+ MSK DL KRQRA EKK KL+NPNFFVS+TRLS+RN+P++ + L+ +F S G L QVKIV++ R D GKA+S+G+GFVEF H DAL ALRALNN+PKI++ Q RPIVEFA+ENA+ ++K
Sbjct: 125 KEDKRNLYLAYEGVITEQDEASNDMSKADLAKRQRALIEKKNKLQNPNFFVSKTRLSIRNIPKDYDDKDLRALFKKHSPPGATLK--QVKIVRETNRTDSSTGKARSRGFGFVEFIDHSDALEALRALNNNPKIWKKQERPIVEFAVENAKALQK 277
BLAST of mRNA_M-pyrifera_M_contig113816.2862.1 vs. uniprot
Match: UPI0009E4F466 (RNA-binding protein 28-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E4F466) HSP 1 Score: 149 bits (376), Expect = 1.530e-38 Identity = 82/153 (53.59%), Postives = 112/153 (73.20%), Query Frame = 1
Query: 34 EREERRELELTN-AVITSQDEAAKGMSKGDLEKRQRAFDEKKAKLKNPNFFVSRTRLSVRNVPRNVTESQLKEIFASSVQGRKLHLHQVKIVKDQTRVDDKGKAKSKGYGFVEFKKHHDALAALRALNNHPKIFEAQRRPIVEFALENAQIMR 489
E +++R L L +I AA+G+SK DL KRQ+A EKK KL+NPN+FVS+TRL VRN+ NV + +LKEIF+++ GR+ H+ +V I++ + R+D G+ +S GYGFVEF H DALAALRA NN+P IF A RRPIVEFALEN+ +++
Sbjct: 1038 EAKDKRNLYLAKEGLILPGSTAAEGLSKADLLKRQKAEKEKKVKLENPNYFVSQTRLCVRNLALNVDDKKLKEIFSTAA-GRRSHVQKVLIIRSKDRLDSSGRGRSMGYGFVEFANHKDALAALRATNNNPAIFGADRRPIVEFALENSLVLK 1189
BLAST of mRNA_M-pyrifera_M_contig113816.2862.1 vs. uniprot
Match: A0A7S0CRV9_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0CRV9_MICPS) HSP 1 Score: 137 bits (344), Expect = 3.800e-37 Identity = 75/138 (54.35%), Postives = 101/138 (73.19%), Query Frame = 1
Query: 94 AAKGMSKGDLEKRQRAFDEKKAKLKNPNFFVSRTRLSVRNVPRNVTESQLKEIFASSVQGRKLH-----LHQVKIVKDQTRVDDKGKAKSKGYGFVEFKKHHDALAALRALNNHPKIFEAQRRPIVEFALENAQIMRK 492
AA+G+S+ D++KR+RA +E+ KLKNPNFF+S+TRL VRNVP + + QLK +F +V+ R LH K++ D TR D+ GK +S+G GFVEF +H ALAALRALNN+P F QRRPIVEFA+E+A+ +RK
Sbjct: 88 AARGVSQTDIQKRRRAREEQAMKLKNPNFFISKTRLQVRNVPLEMDQKQLKRVFFDAVKQRATQANPRVLH-AKLLFDPTRPDENGKPRSRGIGFVEFAEHEHALAALRALNNNPATFTPQRRPIVEFAVEDARAVRK 224
BLAST of mRNA_M-pyrifera_M_contig113816.2862.1 vs. uniprot
Match: A0A1Y5I107_OSTTA (Uncharacterized protein n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5I107_OSTTA) HSP 1 Score: 142 bits (357), Expect = 5.160e-36 Identity = 76/137 (55.47%), Postives = 99/137 (72.26%), Query Frame = 1
Query: 94 AAKGMSKGDLEKRQRAFDEKKAKLKNPNFFVSRTRLSVRNVPRNVTESQLKEIFASSVQGRKLH----LHQVKIVKDQTRVDDKGKAKSKGYGFVEFKKHHDALAALRALNNHPKIFEAQRRPIVEFALENAQIMRK 492
AA G+SK D+EKR+RA +E++ KLKNPNFFVSRTRLSVRN+P + LK++F +VQ R H + K++ D R+D+ GK K+KG GFVEF +H AL ALRALNN+P F RRPIVEFA+E+A+ +RK
Sbjct: 607 AADGVSKSDIEKRRRANEERQLKLKNPNFFVSRTRLSVRNIPPEMDSKTLKKMFIEAVQKRATHAAPKVMHAKLLYDSERMDENGKPKNKGIGFVEFSEHEHALTALRALNNNPDAFTRARRPIVEFAIEDARAVRK 743
BLAST of mRNA_M-pyrifera_M_contig113816.2862.1 vs. uniprot
Match: A0A7D9DWU5_PARCT (RNA-binding 28-like n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9DWU5_PARCT) HSP 1 Score: 136 bits (343), Expect = 5.660e-36 Identity = 74/154 (48.05%), Postives = 104/154 (67.53%), Query Frame = 1
Query: 31 TEREERRELELTNAVITSQDEAAKGMSKGDLEKRQRAFDEKKAKLKNPNFFVSRTRLSVRNVPRNVTESQLKEIFASSVQGRKLHLHQVKIVKDQTRVDDKGKAKSKGYGFVEFKKHHDALAALRALNNHPKIFEAQRRPIVEFALENAQIMRK 492
T R++R VI EAA G+SK DL+KRQ+A +EKK KLK P+F VS+TRL RN+P ++ + +L E+ + G+ + +V+I+++ RVD G +SKG+GF EFK H DAL LRA NN+P IF A RRPIVEFA+EN+ I+++
Sbjct: 30 TPRDKRNLYLAKEGVIMPGTEAAAGLSKSDLQKRQKAEEEKKVKLKMPHFIVSKTRLCFRNLPLHIDDKKLSEVLRTVCDGKPKTVGKVRIMRNMERVDSSGLGRSKGFGFAEFKGHDDALDVLRATNNNPAIFGADRRPIVEFAIENSLILQR 183
BLAST of mRNA_M-pyrifera_M_contig113816.2862.1 vs. uniprot
Match: A0A2B4SW49_STYPI (RNA-binding protein 28 n=2 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4SW49_STYPI) HSP 1 Score: 141 bits (355), Expect = 9.590e-36 Identity = 72/139 (51.80%), Postives = 103/139 (74.10%), Query Frame = 1
Query: 73 VITSQDEAAKGMSKGDLEKRQRAFDEKKAKLKNPNFFVSRTRLSVRNVPRNVTESQLKEIFASSVQGRKLHLHQVKIVKDQTRVDDKGKAKSKGYGFVEFKKHHDALAALRALNNHPKIFEAQRRPIVEFALENAQIMR 489
+ITS EAA+G+SK DL KRQ+A EKK KL+NPN FVS TRL VRN+P NV + +L+EIF ++ G+++ + +V I++ + R+D G+ +S GYGF+EF H DALAALR NN+P +F RRPIV+F++EN +++
Sbjct: 534 LITSGSEAARGLSKADLLKRQKAEAEKKTKLENPNNFVSTTRLCVRNLPLNVDDKKLQEIFGTAT-GKRVRVKKVLIIRSKERLDSAGRGRSMGYGFIEFTNHKDALAALRVTNNNPALFGPDRRPIVDFSIENGLVLK 671
BLAST of mRNA_M-pyrifera_M_contig113816.2862.1 vs. uniprot
Match: T2M3Z4_HYDVU (RNA-binding protein 28 n=3 Tax=Hydra vulgaris TaxID=6087 RepID=T2M3Z4_HYDVU) HSP 1 Score: 139 bits (349), Expect = 6.240e-35 Identity = 72/139 (51.80%), Postives = 100/139 (71.94%), Query Frame = 1
Query: 73 VITSQDEAAKGMSKGDLEKRQRAFDEKKAKLKNPNFFVSRTRLSVRNVPRNVTESQLKEIFASSVQGRKLHLHQVKIVKDQTRVDDKGKAKSKGYGFVEFKKHHDALAALRALNNHPKIFEAQRRPIVEFALENAQIMR 489
+IT AA+G+S DL+KR++A EKKAKLKNPN+FVSRTRLSVRN+P N++ +LK+ F +V+ + ++ VKI+ + R D KG +S G+GF+E H ALA LRA NN+P +F RRPIVEFA+ENA+ ++
Sbjct: 590 MITRNSPAAEGLSDADLKKREKALIEKKAKLKNPNYFVSRTRLSVRNLPLNISSIELKDAFLKAVKNDDIKINNVKIMTSKDRKDSKGMPRSLGFGFLEVGVHEHALAILRATNNNPDLFGKNRRPIVEFAIENAKAIK 728
BLAST of mRNA_M-pyrifera_M_contig113816.2862.1 vs. uniprot
Match: UPI00077A8B1B (RNA-binding protein 28-like isoform X1 n=3 Tax=Acropora TaxID=6127 RepID=UPI00077A8B1B) HSP 1 Score: 138 bits (348), Expect = 8.500e-35 Identity = 78/158 (49.37%), Postives = 112/158 (70.89%), Query Frame = 1
Query: 34 EREERRELEL-TNAVITSQDEAAKGMSKGDLEKRQRAFDEKKAKLKNPNFFVSRTRLSVRNVPRNVTESQLKEIFASSVQGRKLHLHQVKIVKDQTRVDDKGKAKSKGYGFVEFKKHHDALAALRALNNHPKIFEAQRRPIVEFALENAQIMRKRKIR 504
E +++R L L T +I AA+G+S+ DL +RQ+A EKKAKL +PN+FVS TRL VRN+P NV + +L EIF+++ K+H+ +V I++ + R D G+ +S G+GFVEF+ H DALA LRA NN+P IF RRPIVEFA+EN+ +++ +K R
Sbjct: 550 ENKDKRNLYLATEGLIYPGSTAAEGLSQSDLTRRQKAEREKKAKLADPNYFVSSTRLCVRNLPLNVDDKKLAEIFSTAT-SEKVHVKKVLIMRSKDRKDTAGRQRSLGFGFVEFRNHKDALATLRATNNNPGIFSEDRRPIVEFAVENSVVIKAKKRR 706
BLAST of mRNA_M-pyrifera_M_contig113816.2862.1 vs. uniprot
Match: A0A7S0I761_MICPS (Hypothetical protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0I761_MICPS) HSP 1 Score: 136 bits (343), Expect = 1.690e-34 Identity = 74/138 (53.62%), Postives = 102/138 (73.91%), Query Frame = 1
Query: 94 AAKGMSKGDLEKRQRAFDEKKAKLKNPNFFVSRTRLSVRNVPRNVTESQLKEIFASSVQGRKLH-----LHQVKIVKDQTRVDDKGKAKSKGYGFVEFKKHHDALAALRALNNHPKIFEAQRRPIVEFALENAQIMRK 492
AA+G+S+ D+ KR+RA +E+ KLKNPNFF+SRTRL VRNVP V + +LK+IF +V+ R LH K++ D TR D +GK +S+G GFVEF +H ALAALRALNN+P++F RRPI+EFA+E+A+ ++K
Sbjct: 283 AARGVSQADIMKRRRAKEEQALKLKNPNFFISRTRLQVRNVPPEVDQKELKKIFLEAVKKRATQANPRVLH-AKLLYDPTRPDAEGKPRSRGIGFVEFAEHEHALAALRALNNNPEVFNKARRPIIEFAVEDARAVKK 419
BLAST of mRNA_M-pyrifera_M_contig113816.2862.1 vs. uniprot
Match: A0A7R9Y5M5_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9Y5M5_MICPS) HSP 1 Score: 132 bits (331), Expect = 5.440e-34 Identity = 76/148 (51.35%), Postives = 101/148 (68.24%), Query Frame = 1
Query: 64 TNAVITSQDEAAKGMSKGDLEKRQRAFDEKKAKLKNPNFFVSRTRLSVRNVPRNVTESQLKEIFASSVQGRKLH-----LHQVKIVKDQTRVDDKGKAKSKGYGFVEFKKHHDALAALRALNNHPKIFEAQRRPIVEFALENAQIMRK 492
T I + AA+G+S+ D+ KR+RA +E+K KLKNPNFF+S+ RL VRNVP V + QLK+IF +V R LH +++ D TR D GK +S+G GFVEF H ALAALR LNN+P IF A +RPIVEFA+E+A+ ++K
Sbjct: 200 TEGQIHEEGPAAQGVSREDIMKRRRAKEEQKMKLKNPNFFISKNRLQVRNVPPEVDQKQLKKIFHDAVLQRATKANPKVLH-ARLLFDNTRPDANGKPRSRGIGFVEFDAHDHALAALRTLNNNPTIFTAAKRPIVEFAVEDARAVKK 346 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113816.2862.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig113816.2862.1 >prot_M-pyrifera_M_contig113816.2862.1 ID=prot_M-pyrifera_M_contig113816.2862.1|Name=mRNA_M-pyrifera_M_contig113816.2862.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=168bp KRGARQRDRETEREERRELELTNAVITSQDEAAKGMSKGDLEKRQRAFDEback to top mRNA from alignment at M-pyrifera_M_contig113816:28..531- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig113816.2862.1 ID=mRNA_M-pyrifera_M_contig113816.2862.1|Name=mRNA_M-pyrifera_M_contig113816.2862.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=504bp|location=Sequence derived from alignment at M-pyrifera_M_contig113816:28..531- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig113816:28..531- >mRNA_M-pyrifera_M_contig113816.2862.1 ID=mRNA_M-pyrifera_M_contig113816.2862.1|Name=mRNA_M-pyrifera_M_contig113816.2862.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1008bp|location=Sequence derived from alignment at M-pyrifera_M_contig113816:28..531- (Macrocystis pyrifera P11B4 male)back to top |