mRNA_M-pyrifera_M_contig113514.2818.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig113514.2818.1 vs. uniprot
Match: A0A7S4IJA5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IJA5_9EUKA) HSP 1 Score: 265 bits (677), Expect = 1.080e-85 Identity = 124/182 (68.13%), Postives = 152/182 (83.52%), Query Frame = 1
Query: 7 MYRILKLYLKGEPYYMDVVEMFLETSYQTELGQLLDLTSQPNTKTNNLDLFTLDVYKKIVKYKTAFYSFYLPVALAMAMAGLNSEKNLELAKSILLPMGEYFQVQDDYLDCYGAPEVIGKIGTDIEENKCGWLVVQALQRVTAEQRAVLEQHYGKSAPEDVAAVKQLYRDLDLTAVFKQYEE 552
MYR+LK + + + YY+D++E+F E S+QTE+GQLLDLTSQPNT NNLDLFTLD YKKIV+YKTA+YSFYLPVALAM M G+ + NL+ A+ ILL MGEYFQ+QDDYLDCYGAPEVIGK+G DIEENKCGWLVVQAL + T EQR +L +HYG+ +PE V VKQLY++LD+ +FK YE+
Sbjct: 143 MYRVLKRHFRKKEYYVDLIELFQEVSFQTEMGQLLDLTSQPNTTKNNLDLFTLDTYKKIVEYKTAYYSFYLPVALAMYMGGIATSDNLKAAQKILLQMGEYFQIQDDYLDCYGAPEVIGKVGRDIEENKCGWLVVQALLKCTPEQREILAEHYGQESPESVQKVKQLYKELDIEGIFKAYEQ 324
BLAST of mRNA_M-pyrifera_M_contig113514.2818.1 vs. uniprot
Match: F0Z8Y9_DICPU (Farnesyl diphosphate synthase n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0Z8Y9_DICPU) HSP 1 Score: 234 bits (597), Expect = 2.970e-73 Identity = 112/184 (60.87%), Postives = 140/184 (76.09%), Query Frame = 1
Query: 1 AAMYRILKLYLKGEPYYMDVVEMFLETSYQTELGQLLDLTSQPNTKTNNLDLFTLDVYKKIVKYKTAFYSFYLPVALAMAMAGLNSEKNLELAKSILLPMGEYFQVQDDYLDCYGAPEVIGKIGTDIEENKCGWLVVQALQRVTAEQRAVLEQHYGKSAPEDVAAVKQLYRDLDLTAVFKQYEE 552
+ +Y ++K Y + E YY D++++F ETSYQTELGQLLDLT+QPN + LFTL+ Y++IVKYKTA+YSFYLPVALAM M G+NS E AK ILLPMGEYFQ+QDDYLDCYG+P VIGKIG DIEENKC W++ QA+ T Q L++HYG PEDV VK+L+ ++DL +FK YEE
Sbjct: 170 SCIYILIKKYFRNEQYYADILDLFHETSYQTELGQLLDLTTQPNR--GDFSLFTLNTYRRIVKYKTAYYSFYLPVALAMLMCGINSTPAFETAKDILLPMGEYFQIQDDYLDCYGSPAVIGKIGRDIEENKCSWMICQAILNATPSQIETLKKHYGVDNPEDVQIVKKLFGEIDLKKIFKTYEE 351
BLAST of mRNA_M-pyrifera_M_contig113514.2818.1 vs. uniprot
Match: Q3KPW7_XENLA (MGC131256 protein n=8 Tax=Xenopus TaxID=8353 RepID=Q3KPW7_XENLA) HSP 1 Score: 233 bits (593), Expect = 4.240e-73 Identity = 116/185 (62.70%), Postives = 148/185 (80.00%), Query Frame = 1
Query: 1 AAMYRILKLYLKGEPYYMDVVEMFLETSYQTELGQLLDL-TSQPNTKTNNLDLFTLDVYKKIVKYKTAFYSFYLPVALAMAMAGLNSEKNLELAKSILLPMGEYFQVQDDYLDCYGAPEVIGKIGTDIEENKCGWLVVQALQRVTAEQRAVLEQHYGKSAPEDVAAVKQLYRDLDLTAVFKQYEE 552
A +YRIL+ Y +G+PYY+ ++E+FLETSYQTELGQ LDL T+QP +L+ +T YK IVKYKTAFYSFYLPVA AM MAG+ E + AK+ILL MGE+FQ+QDDYLDCYG P V GKIGTDI++NKCGWLVV+AL+RV+ EQR VLE++YG+ P+ V VKQLY +LD+ A++++YEE
Sbjct: 132 AGIYRILRKYCRGKPYYLSLLELFLETSYQTELGQALDLITAQPGKV--DLNRYTEKRYKAIVKYKTAFYSFYLPVAAAMYMAGIAGEAEHKNAKTILLEMGEFFQIQDDYLDCYGDPSVTGKIGTDIQDNKCGWLVVEALKRVSPEQRQVLEENYGRDEPDKVQRVKQLYDELDMAAIYRRYEE 314
BLAST of mRNA_M-pyrifera_M_contig113514.2818.1 vs. uniprot
Match: UPI001C4B7510 (farnesyl pyrophosphate synthase n=1 Tax=Sceloporus undulatus TaxID=8520 RepID=UPI001C4B7510) HSP 1 Score: 232 bits (592), Expect = 6.550e-73 Identity = 115/184 (62.50%), Postives = 148/184 (80.43%), Query Frame = 1
Query: 1 AAMYRILKLYLKGEPYYMDVVEMFLETSYQTELGQLLDLTSQPNTKTNNLDLFTLDVYKKIVKYKTAFYSFYLPVALAMAMAGLNSEKNLELAKSILLPMGEYFQVQDDYLDCYGAPEVIGKIGTDIEENKCGWLVVQALQRVTAEQRAVLEQHYGKSAPEDVAAVKQLYRDLDLTAVFKQYEE 552
A++YR+L+ Y + +PYY++++E+FL+T+YQTELGQ LDL S P +L FT + YK IVKYKTAFYSFYLPVA AM MAG++SE+ AK+ILL MGE+FQ+QDD+LDC+G P V GKIGTDIE+NKC WLVVQ L+RV+AEQR VLE++YG++ P+ V VKQLY LDL AV++QYEE
Sbjct: 137 ASIYRLLRRYCRSQPYYLNLLELFLQTTYQTELGQALDLISAPPV---DLKRFTEERYKAIVKYKTAFYSFYLPVAAAMYMAGIDSEEEHSHAKTILLEMGEFFQIQDDFLDCFGDPAVTGKIGTDIEDNKCSWLVVQCLKRVSAEQRRVLEENYGQNDPDKVVRVKQLYEALDLKAVYQQYEE 317
BLAST of mRNA_M-pyrifera_M_contig113514.2818.1 vs. uniprot
Match: A0A8C6JAT2_MELUD (Farnesyl diphosphate synthase n=2 Tax=Psittaciformes TaxID=9223 RepID=A0A8C6JAT2_MELUD) HSP 1 Score: 228 bits (580), Expect = 1.030e-72 Identity = 112/184 (60.87%), Postives = 144/184 (78.26%), Query Frame = 1
Query: 1 AAMYRILKLYLKGEPYYMDVVEMFLETSYQTELGQLLDLTSQPNTKTNNLDLFTLDVYKKIVKYKTAFYSFYLPVALAMAMAGLNSEKNLELAKSILLPMGEYFQVQDDYLDCYGAPEVIGKIGTDIEENKCGWLVVQALQRVTAEQRAVLEQHYGKSAPEDVAAVKQLYRDLDLTAVFKQYEE 552
+ +YR+LK Y G PYY+ ++E+FL+T+YQTELGQ LDL + P ++ + L F+ YK IVKYKTAFYSFYLPVA AM MAG++S++ + AK+ILL MGE+FQ+QDDYLDCYG P+V GK+GTDIE+NKC WLVVQ L RVT EQR +LE++YG+ PE VA VK+LY L + A F+QYEE
Sbjct: 14 SCVYRLLKKYCGGHPYYVHLLELFLQTAYQTELGQTLDLITAPISQVD-LTRFSEQRYKAIVKYKTAFYSFYLPVAAAMYMAGIDSKEEHDNAKAILLEMGEFFQIQDDYLDCYGDPKVTGKVGTDIEDNKCSWLVVQCLHRVTPEQRQILEENYGRKEPEKVAKVKELYDSLGMRAAFQQYEE 196
BLAST of mRNA_M-pyrifera_M_contig113514.2818.1 vs. uniprot
Match: A0A1Y2ASW9_9FUNG (Uncharacterized protein n=1 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y2ASW9_9FUNG) HSP 1 Score: 231 bits (588), Expect = 2.020e-72 Identity = 109/184 (59.24%), Postives = 147/184 (79.89%), Query Frame = 1
Query: 1 AAMYRILKLYLKGEPYYMDVVEMFLETSYQTELGQLLDLTSQPNTKTNNLDLFTLDVYKKIVKYKTAFYSFYLPVALAMAMAGLNSEKNLELAKSILLPMGEYFQVQDDYLDCYGAPEVIGKIGTDIEENKCGWLVVQALQRVTAEQRAVLEQHYGKSAPEDVAAVKQLYRDLDLTAVFKQYEE 552
+ +Y++LK Y + E YY+D+VE+F E SY TELGQL+DL + P K N LD F++D Y IV+YKTAFYSFYLPVALAM MAG+N+E++L++AK IL+P+GEYFQVQDDYLDCYG P+VIGKIGTDI++NKC WLV + L T EQR +LE++YG++ P + VK LY++L++ ++K+YEE
Sbjct: 125 SCIYKLLKKYFRNEKYYIDIVELFHEISYTTELGQLIDLITAPEGKVN-LDKFSMDKYIWIVRYKTAFYSFYLPVALAMTMAGINNEESLKIAKEILIPLGEYFQVQDDYLDCYGDPKVIGKIGTDIQDNKCSWLVNKTLSICTPEQRQILEENYGQNDPVKIQKVKDLYKELNIEGLYKEYEE 307
BLAST of mRNA_M-pyrifera_M_contig113514.2818.1 vs. uniprot
Match: UPI000777BB81 (LOW QUALITY PROTEIN: farnesyl pyrophosphate synthase n=1 Tax=Coturnix japonica TaxID=93934 RepID=UPI000777BB81) HSP 1 Score: 229 bits (584), Expect = 4.780e-72 Identity = 113/184 (61.41%), Postives = 145/184 (78.80%), Query Frame = 1
Query: 1 AAMYRILKLYLKGEPYYMDVVEMFLETSYQTELGQLLDLTSQPNTKTNNLDLFTLDVYKKIVKYKTAFYSFYLPVALAMAMAGLNSEKNLELAKSILLPMGEYFQVQDDYLDCYGAPEVIGKIGTDIEENKCGWLVVQALQRVTAEQRAVLEQHYGKSAPEDVAAVKQLYRDLDLTAVFKQYEE 552
+++YR+LK Y +PYY+ ++E+FL+T YQTELGQ L L P +K + L LFT + YK IVKYKTAFYSFYLPVA AM MAG++S++ E AK+ILL MGEYFQ+QDDYLDC+G PE+ GK+GTDI++NKC WLVVQ LQRVT EQR +LE++YG+ PE VA VK+LY + + A F+QYEE
Sbjct: 108 SSVYRMLKKYCGQQPYYVHLLELFLQTGYQTELGQXLGLIPPPISKVD-LSLFTEERYKAIVKYKTAFYSFYLPVAAAMYMAGIDSKEEHENAKAILLEMGEYFQIQDDYLDCFGDPELTGKVGTDIQDNKCSWLVVQCLQRVTPEQRQLLEENYGRKEPEKVAKVKELYESVGMRAAFQQYEE 290
BLAST of mRNA_M-pyrifera_M_contig113514.2818.1 vs. uniprot
Match: UPI000644D952 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644D952) HSP 1 Score: 230 bits (586), Expect = 4.830e-72 Identity = 108/184 (58.70%), Postives = 144/184 (78.26%), Query Frame = 1
Query: 1 AAMYRILKLYLKGEPYYMDVVEMFLETSYQTELGQLLDLTSQPNTKTNNLDLFTLDVYKKIVKYKTAFYSFYLPVALAMAMAGLNSEKNLELAKSILLPMGEYFQVQDDYLDCYGAPEVIGKIGTDIEENKCGWLVVQALQRVTAEQRAVLEQHYGKSAPEDVAAVKQLYRDLDLTAVFKQYEE 552
+ +Y ++ Y + +PYY D++++F +T++QTELGQLLDLT+QPN + FTLD Y +IVKYKTA+YSFYLPVALAM +AG+ ++K+ E A ILLPMGEYFQ+QDDYLDCYGAPEVIGK+G DIEENKC WL+ QA+ T EQ A L+ YG+ PEDVA VK+++ D+++ +FKQYE+
Sbjct: 134 SCIYIFVRKYFRSQPYYADLLDLFHDTTWQTELGQLLDLTTQPNR--GDFTPFTLDTYNRIVKYKTAYYSFYLPVALAMILAGITNKKSFESALDILLPMGEYFQIQDDYLDCYGAPEVIGKVGRDIEENKCSWLICQAILNGTPEQIAQLKTVYGRDNPEDVAVVKKIFNDIEIPKIFKQYED 315
BLAST of mRNA_M-pyrifera_M_contig113514.2818.1 vs. uniprot
Match: H9G7J1_ANOCA (Farnesyl diphosphate synthase n=2 Tax=Anolis carolinensis TaxID=28377 RepID=H9G7J1_ANOCA) HSP 1 Score: 229 bits (585), Expect = 7.470e-72 Identity = 111/184 (60.33%), Postives = 147/184 (79.89%), Query Frame = 1
Query: 1 AAMYRILKLYLKGEPYYMDVVEMFLETSYQTELGQLLDLTSQPNTKTNNLDLFTLDVYKKIVKYKTAFYSFYLPVALAMAMAGLNSEKNLELAKSILLPMGEYFQVQDDYLDCYGAPEVIGKIGTDIEENKCGWLVVQALQRVTAEQRAVLEQHYGKSAPEDVAAVKQLYRDLDLTAVFKQYEE 552
+++YR+LK + +G+PYY++++E+FL+++YQTELGQ LDL S P +LD FT + YK IVKYKTAFYSFYLPVA AM MAG++SE+ A++ILL MGE+FQ+QDDYLDC+G P+V GKIGTDIE+NKC WLVVQ L+R + EQ+ +LE +YG++ PE V VKQLY +LDL VF+ YEE
Sbjct: 137 SSIYRLLKRHCRGQPYYLNLLELFLQSAYQTELGQTLDLISAPPV---DLDSFTEERYKAIVKYKTAFYSFYLPVAAAMYMAGIDSEEEHSHARTILLEMGEFFQIQDDYLDCFGDPDVTGKIGTDIEDNKCSWLVVQCLKRASPEQKQILEANYGQNDPEKVGRVKQLYEELDLKTVFQNYEE 317
BLAST of mRNA_M-pyrifera_M_contig113514.2818.1 vs. uniprot
Match: H3AQ67_LATCH (Uncharacterized protein n=2 Tax=Latimeria chalumnae TaxID=7897 RepID=H3AQ67_LATCH) HSP 1 Score: 229 bits (585), Expect = 7.690e-72 Identity = 117/186 (62.90%), Postives = 141/186 (75.81%), Query Frame = 1
Query: 1 AAMYRILKLYLKGEPYYMDVVEMFLETSYQTELGQLLDLTSQPNTKTNNLDL--FTLDVYKKIVKYKTAFYSFYLPVALAMAMAGLNSEKNLELAKSILLPMGEYFQVQDDYLDCYGAPEVIGKIGTDIEENKCGWLVVQALQRVTAEQRAVLEQHYGKSAPEDVAAVKQLYRDLDLTAVFKQYEE 552
A++YR+LK Y KG+PYY ++E+FLE SYQTELGQ LDL + P N +DL FT YK IVKYKTAFYSFYLPVA AM MAG+ E AK+ILL MGE+FQ+QDDYLDCYG P V GKIGTDIE+NKC WLVV+AL+R T EQ+ +LE++YGK+ E VA VK LY DLDL +++YEE
Sbjct: 136 ASIYRLLKKYCKGQPYYFHLLELFLEASYQTELGQALDLMTAPP---NEIDLSRFTESRYKAIVKYKTAFYSFYLPVAAAMYMAGIEKEAEHNNAKTILLEMGEFFQIQDDYLDCYGDPAVTGKIGTDIEDNKCSWLVVEALKRGTPEQKLILEENYGKNEQEKVAKVKALYEDLDLKVAYREYEE 318 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113514.2818.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig113514.2818.1 >prot_M-pyrifera_M_contig113514.2818.1 ID=prot_M-pyrifera_M_contig113514.2818.1|Name=mRNA_M-pyrifera_M_contig113514.2818.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=182bp MYRILKLYLKGEPYYMDVVEMFLETSYQTELGQLLDLTSQPNTKTNNLDLback to top mRNA from alignment at M-pyrifera_M_contig113514:27..578+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig113514.2818.1 ID=mRNA_M-pyrifera_M_contig113514.2818.1|Name=mRNA_M-pyrifera_M_contig113514.2818.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=552bp|location=Sequence derived from alignment at M-pyrifera_M_contig113514:27..578+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig113514:27..578+ >mRNA_M-pyrifera_M_contig113514.2818.1 ID=mRNA_M-pyrifera_M_contig113514.2818.1|Name=mRNA_M-pyrifera_M_contig113514.2818.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1092bp|location=Sequence derived from alignment at M-pyrifera_M_contig113514:27..578+ (Macrocystis pyrifera P11B4 male)back to top |