mRNA_M-pyrifera_M_contig113338.2787.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig113338.2787.1
Unique NamemRNA_M-pyrifera_M_contig113338.2787.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig113338.2787.1 vs. uniprot
Match: E4WQ05_OIKDI (Trimethylguanosine synthase n=2 Tax=Oikopleura dioica TaxID=34765 RepID=E4WQ05_OIKDI)

HSP 1 Score: 175 bits (443), Expect = 1.570e-50
Identity = 84/137 (61.31%), Postives = 105/137 (76.64%), Query Frame = 1 
Query:    1 LAAIDNDPERLKCAQHNAKVYGVEDRIDFILGDYFDIIKRIRADVVFLSPPWGGPDYLDSDVFDVHDMGGMDGSVVMQYARMASHNIAYFLPRNVDSVQLLALA-PDSRCEVEGNYLNAKLKTVTAYYGDLIYEGEE 408
            + AID DPE+++ A+HNA +YGVEDRI+FI+GDYF II  +R DVVFLSPPWGGP YLD D+FD+ DMGGMDG  + + A+  + NIAYF+PRN DS QL  LA  D + EVE N LN K KT+TAY+G+LI + EE
Sbjct:  248 VIAIDIDPEKIEMAKHNAAIYGVEDRIEFIVGDYFKIIPSLRPDVVFLSPPWGGPAYLDQDIFDLKDMGGMDGLEIYRVAKERTDNIAYFVPRNTDSAQLAWLAGEDQQVEVEQNMLNYKTKTITAYFGNLINQHEE 384
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BLAST of mRNA_M-pyrifera_M_contig113338.2787.1 vs. uniprot
Match: A0A1S3JT75_LINUN (Trimethylguanosine synthase n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3JT75_LINUN)

HSP 1 Score: 172 bits (435), Expect = 4.780e-47
Identity = 80/132 (60.61%), Postives = 105/132 (79.55%), Query Frame = 1 
Query:    1 LAAIDNDPERLKCAQHNAKVYGVEDRIDFILGDYFDIIKRIRADVVFLSPPWGGPDYLDSDVFDVHDMGGMDGSVVMQYARMASHNIAYFLPRNVDSVQLLALA-PDSRCEVEGNYLNAKLKTVTAYYGDLI 393
            + AID DP +L+CA+HNA+VYGV DRI+FI GDY ++   ++ADVVFLSPPWGGPDYL+++VFD+H M  +DG  + + A+  S+NIAYF PRNV+  QL++LA P  + E+E N+LN KLKTVTAYYGDLI
Sbjct:  863 VIAIDIDPVKLECARHNAEVYGVADRIEFIQGDYMEVATELKADVVFLSPPWGGPDYLNAEVFDLHTMIQIDGFAIFEKAKKISNNIAYFAPRNVNVEQLISLAGPGGKVEIEQNFLNKKLKTVTAYYGDLI 994
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BLAST of mRNA_M-pyrifera_M_contig113338.2787.1 vs. uniprot
Match: A7SAF9_NEMVE (Trimethylguanosine synthase n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SAF9_NEMVE)

HSP 1 Score: 158 bits (399), Expect = 2.690e-46
Identity = 72/132 (54.55%), Postives = 101/132 (76.52%), Query Frame = 1 
Query:    1 LAAIDNDPERLKCAQHNAKVYGVEDRIDFILGDYFDIIKRIRADVVFLSPPWGGPDYLDSDVFDVHDMGGMDGSVVMQYARMASHNIAYFLPRNVDSVQLLALA-PDSRCEVEGNYLNAKLKTVTAYYGDLI 393
            + AID DP ++ CA+HNA++YGV DRI+F+LGD+  I+ +++ADV+FLSPPWGGP Y  +DVFD+  M  +DG  + + A+  + NIAYF+PRNV+  QL +LA P  + E+E N++N KLKTVTAYYG+LI
Sbjct:   77 VIAIDIDPVKIDCARHNAEIYGVADRIEFVLGDFRQIVPQLKADVIFLSPPWGGPGYACADVFDIQTMISLDGFELYETAKRVTPNIAYFMPRNVNMEQLTSLAGPAGKVEIEQNFVNKKLKTVTAYYGELI 208
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BLAST of mRNA_M-pyrifera_M_contig113338.2787.1 vs. uniprot
Match: K1S3L6_CRAGI (Trimethylguanosine synthase n=1 Tax=Crassostrea gigas TaxID=29159 RepID=K1S3L6_CRAGI)

HSP 1 Score: 160 bits (405), Expect = 2.680e-45
Identity = 76/136 (55.88%), Postives = 100/136 (73.53%), Query Frame = 1 
Query:    1 LAAIDNDPERLKCAQHNAKVYGVEDRIDFILGDYFDIIKRIRADVVFLSPPWGGPDYLDSDVFDVHDMGGMDGSVVMQYARMASHNIAYFLPRNVDSVQLLALA-PDSRCEVEGNYLNAKLKTVTAYYGDLIYEGE 405
            + AID DP+R+  A+HNA+VYGVEDRI+FI+GDYF +  ++RADVVFLSPPWGGP+YL ++VFD+  M  +    +   AR  + NIA+F+PRN +  QL  LA P    E+E N LN KLKT+TAYYG+L+ EGE
Sbjct:  216 VIAIDIDPDRVAIAKHNARVYGVEDRIEFIIGDYFHVAPKLRADVVFLSPPWGGPEYLGAEVFDLETMIELKSYPIFDVARKITDNIAFFVPRNANVEQLTYLAGPGGNVEIEQNLLNNKLKTITAYYGELVLEGE 351
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BLAST of mRNA_M-pyrifera_M_contig113338.2787.1 vs. uniprot
Match: F1R4S6_DANRE (Trimethylguanosine synthase (Fragment) n=1 Tax=Danio rerio TaxID=7955 RepID=F1R4S6_DANRE)

HSP 1 Score: 153 bits (387), Expect = 6.840e-45
Identity = 73/132 (55.30%), Postives = 94/132 (71.21%), Query Frame = 1 
Query:    1 LAAIDNDPERLKCAQHNAKVYGVEDRIDFILGDYFDIIKRIRADVVFLSPPWGGPDYLDSDVFDVHDMGGMDGSVVMQYARMASHNIAYFLPRNVDSVQLLALA-PDSRCEVEGNYLNAKLKTVTAYYGDLI 393
            +  ID DP RL  AQHNA VYGVE RIDF+ GD+  +   +R D+VFLSPPWGGP+YL +DVF++  M   DG  + + ++M S NI YFLPRN D  Q+ +LA P  + EVE N+LN KLKT+TAY+G+LI
Sbjct:   49 VIGIDIDPVRLALAQHNAAVYGVEQRIDFLQGDFLQLAPHLRGDMVFLSPPWGGPEYLTADVFNIQTMMTPDGFEIFRLSKMISDNIVYFLPRNADMEQIASLAGPGGKVEVEQNFLNNKLKTITAYFGNLI 180
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BLAST of mRNA_M-pyrifera_M_contig113338.2787.1 vs. uniprot
Match: UPI000D737ABE (trimethylguanosine synthase-like n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=UPI000D737ABE)

HSP 1 Score: 157 bits (398), Expect = 9.670e-45
Identity = 73/137 (53.28%), Postives = 100/137 (72.99%), Query Frame = 1 
Query:    1 LAAIDNDPERLKCAQHNAKVYGVEDRIDFILGDYFDIIKRIRADVVFLSPPWGGPDYLDSDVFDVHDMGGMDGSVVMQYARMASHNIAYFLPRNVDSVQLLALAPDS-RCEVEGNYLNAKLKTVTAYYGDLIYEGEE 408
            + AID DPE+L+ A+ NA +YGV DRI+F+LGDY  +   ++ADVVFLSPPWGGPDY  SD++D++ M G +   +    R  + +IAYF+PRN +  QL ALA +  R E+E N+LN KLKT+TAYYG+L+ +GEE
Sbjct:  197 VIAIDIDPEKLRLAKINATIYGVADRIEFVLGDYLKLASHLKADVVFLSPPWGGPDYQHSDIYDLNAMPGFEADQLFALTRKITPHIAYFVPRNANIEQLTALAGEGGRVEIEQNFLNTKLKTITAYYGELVQDGEE 333
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BLAST of mRNA_M-pyrifera_M_contig113338.2787.1 vs. uniprot
Match: A0A7R9A7K2_9CRUS (Trimethylguanosine synthase n=1 Tax=Darwinula stevensoni TaxID=69355 RepID=A0A7R9A7K2_9CRUS)

HSP 1 Score: 164 bits (414), Expect = 2.800e-44
Identity = 77/132 (58.33%), Postives = 102/132 (77.27%), Query Frame = 1 
Query:    1 LAAIDNDPERLKCAQHNAKVYGVEDRIDFILGDYFDIIKRIRADVVFLSPPWGGPDYLDSDVFDVHDMGGMDGSVVMQYARMASHNIAYFLPRNVDSVQLLALA-PDSRCEVEGNYLNAKLKTVTAYYGDLI 393
            + AID +PE++  A+HNA +YGV DRIDF++GD+FD+  R++A+VVFLSPPWGGP YL++D +D+H M  M+G  + Q A+  S+NIAYFLPRN +  QL+ LA P    EVE N+LN KLKT+TAYYGDLI
Sbjct:  728 VIAIDINPEKVALARHNASLYGVADRIDFVVGDFFDLASRLQAEVVFLSPPWGGPAYLNADSYDMHHMQDMNGFDIFQAAQQISNNIAYFLPRNTNVEQLVQLAGPGEAVEVEQNFLNKKLKTITAYYGDLI 859
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BLAST of mRNA_M-pyrifera_M_contig113338.2787.1 vs. uniprot
Match: A0A0B6YE87_9EUPU (Trimethylguanosine synthase (Fragment) n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B6YE87_9EUPU)

HSP 1 Score: 152 bits (384), Expect = 4.090e-44
Identity = 73/137 (53.28%), Postives = 99/137 (72.26%), Query Frame = 1 
Query:    1 LAAIDNDPERLKCAQHNAKVYGVEDRIDFILGDYFDIIKRIRADVVFLSPPWGGPDYLDSDVFDVHDMGGMDGSVVMQYARMASHNIAYFLPRNVDSVQLLALAPDSR-CEVEGNYLNAKLKTVTAYYGDLIYEGEE 408
            + AID D  +L+ A+HNA+VYGV DRI+FI GDY  +   +++DVVFLSPPWGGP+YL + V+D+ DM G + S +M   R  + +IA+FLPRN D+ +L ALA   +  EVE N+LN KLKT+TAY+G+LI   EE
Sbjct:   66 VIAIDIDESKLELARHNAEVYGVADRIEFIHGDYLKLAPTLKSDVVFLSPPWGGPEYLSTSVYDLDDMAGFNASYLMTLTRKNTSSIAFFLPRNADAEKLTALAGQGKQVEVEQNFLNKKLKTITAYFGELIPSNEE 202
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BLAST of mRNA_M-pyrifera_M_contig113338.2787.1 vs. uniprot
Match: UPI00148A1D68 (trimethylguanosine synthase n=1 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148A1D68)

HSP 1 Score: 163 bits (413), Expect = 4.340e-44
Identity = 77/136 (56.62%), Postives = 101/136 (74.26%), Query Frame = 1 
Query:    1 LAAIDNDPERLKCAQHNAKVYGVEDRIDFILGDYFDIIKRIRADVVFLSPPWGGPDYLDSDVFDVHDMGGMDGSVVMQYARMASHNIAYFLPRNVDSVQLLALA-PDSRCEVEGNYLNAKLKTVTAYYGDLIYEGE 405
            + AID DP+R+  A+HNA+VYGVEDRI+FI+GDYF +  ++RADVVFLSPPWGGP+YL ++VFD+  M  +  S +   AR  + NIA+F+PRN +  QL  LA P    E+E N LN KLKT+TAYYG+L+ EGE
Sbjct:  788 VIAIDIDPDRVAIAKHNARVYGVEDRIEFIIGDYFHVAPKLRADVVFLSPPWGGPEYLGAEVFDLETMIELKSSAIFDVARKITDNIAFFVPRNANVEQLTYLAGPGGNVEIEQNLLNNKLKTITAYYGELVLEGE 923
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BLAST of mRNA_M-pyrifera_M_contig113338.2787.1 vs. uniprot
Match: UPI001864A642 (trimethylguanosine synthase n=1 Tax=Colossoma macropomum TaxID=42526 RepID=UPI001864A642)

HSP 1 Score: 162 bits (411), Expect = 6.400e-44
Identity = 79/132 (59.85%), Postives = 97/132 (73.48%), Query Frame = 1 
Query:    1 LAAIDNDPERLKCAQHNAKVYGVEDRIDFILGDYFDIIKRIRADVVFLSPPWGGPDYLDSDVFDVHDMGGMDGSVVMQYARMASHNIAYFLPRNVDSVQLLALA-PDSRCEVEGNYLNAKLKTVTAYYGDLI 393
            + AID DP RL+ AQHNA+VYGV  RIDFI GD+  +  R+RADVVFLSPPWGGP+YL ++VFD+  M   DG  + + ARM S NI YFLPRN D  Q+ +LA P  + EVE N+LN KLKT+TAY+G LI
Sbjct:  687 VIAIDIDPVRLELAQHNAEVYGVAQRIDFIQGDFLQLAPRLRADVVFLSPPWGGPEYLSAEVFDIKTMMSPDGFEIFRLARMISDNIVYFLPRNADMEQIASLAGPGGKVEVEQNFLNNKLKTITAYFGSLI 818
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113338.2787.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
E4WQ05_OIKDI1.570e-5061.31Trimethylguanosine synthase n=2 Tax=Oikopleura dio... [more]
A0A1S3JT75_LINUN4.780e-4760.61Trimethylguanosine synthase n=1 Tax=Lingula unguis... [more]
A7SAF9_NEMVE2.690e-4654.55Trimethylguanosine synthase n=1 Tax=Nematostella v... [more]
K1S3L6_CRAGI2.680e-4555.88Trimethylguanosine synthase n=1 Tax=Crassostrea gi... [more]
F1R4S6_DANRE6.840e-4555.30Trimethylguanosine synthase (Fragment) n=1 Tax=Dan... [more]
UPI000D737ABE9.670e-4553.28trimethylguanosine synthase-like n=1 Tax=Pomacea c... [more]
A0A7R9A7K2_9CRUS2.800e-4458.33Trimethylguanosine synthase n=1 Tax=Darwinula stev... [more]
A0A0B6YE87_9EUPU4.090e-4453.28Trimethylguanosine synthase (Fragment) n=1 Tax=Ari... [more]
UPI00148A1D684.340e-4456.62trimethylguanosine synthase n=1 Tax=Crassostrea gi... [more]
UPI001864A6426.400e-4459.85trimethylguanosine synthase n=1 Tax=Colossoma macr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig113338contigM-pyrifera_M_contig113338:27..434 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score162.2
Seed ortholog evalue1.8e-37
Seed eggNOG ortholog8010.XP_010889672.1
Preferred nameTGS1
KEGG koko:K10408,ko:K14292
KEGG Pathwayko03013,ko05016,map03013,map05016
Hectar predicted targeting categoryother localisation
GOsGO:0000375,GO:0000377,GO:0000387,GO:0000398,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008380,GO:0009451,GO:0009452,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016071,GO:0016740,GO:0016741,GO:0019216,GO:0019222,GO:0022607,GO:0022613,GO:0022618,GO:0030532,GO:0031974,GO:0031981,GO:0032259,GO:0032991,GO:0034622,GO:0034641,GO:0036260,GO:0036261,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043414,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0050789,GO:0065003,GO:0065007,GO:0070013,GO:0071164,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0120114,GO:0140098,GO:1901360,GO:1990904
EggNOG free text desc.Trimethylguanosine synthase homolog (S. cerevisiae)
EggNOG OGs38HT8@33154,3B9P9@33208,3CWBV@33213,4804U@7711,48Z8S@7742,49YVN@7898,KOG2730@1,KOG2730@2759
COG Functional cat.S
Best tax levelActinopterygii
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04812
Exons1
Model size408
Cds size408
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815648.5904438-CDS-M-pyrifera_M_contig113338:26..4341622815648.5904438-CDS-M-pyrifera_M_contig113338:26..434Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig113338 27..434 +
1692277504.2758446-CDS-M-pyrifera_M_contig113338:26..4341692277504.2758446-CDS-M-pyrifera_M_contig113338:26..434Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig113338 27..434 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig113338.2787.1prot_M-pyrifera_M_contig113338.2787.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig113338 27..434 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig113338.2787.1

>prot_M-pyrifera_M_contig113338.2787.1 ID=prot_M-pyrifera_M_contig113338.2787.1|Name=mRNA_M-pyrifera_M_contig113338.2787.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=136bp
LAAIDNDPERLKCAQHNAKVYGVEDRIDFILGDYFDIIKRIRADVVFLSP
PWGGPDYLDSDVFDVHDMGGMDGSVVMQYARMASHNIAYFLPRNVDSVQL
LALAPDSRCEVEGNYLNAKLKTVTAYYGDLIYEGEE
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mRNA from alignment at M-pyrifera_M_contig113338:27..434+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig113338.2787.1 ID=mRNA_M-pyrifera_M_contig113338.2787.1|Name=mRNA_M-pyrifera_M_contig113338.2787.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=408bp|location=Sequence derived from alignment at M-pyrifera_M_contig113338:27..434+ (Macrocystis pyrifera P11B4 male)
CTTGCAGCGATTGACAATGACCCTGAGCGGCTGAAGTGTGCCCAGCACAA
CGCAAAGGTGTACGGTGTGGAGGATAGGATCGACTTCATCCTGGGAGACT
ACTTCGACATCATCAAGCGCATTCGCGCCGACGTCGTCTTCCTCTCTCCT
CCCTGGGGCGGACCCGACTACCTGGACTCGGACGTCTTCGACGTACACGA
CATGGGTGGCATGGATGGGTCGGTGGTGATGCAGTACGCCCGCATGGCGA
GCCACAACATCGCCTACTTTCTTCCGAGAAACGTCGATAGTGTGCAGCTC
CTTGCGCTGGCTCCCGACAGCCGCTGCGAGGTGGAGGGTAACTACTTGAA
TGCCAAGCTCAAGACTGTGACTGCTTATTACGGGGACCTCATCTACGAGG
GTGAGGAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig113338:27..434+

>mRNA_M-pyrifera_M_contig113338.2787.1 ID=mRNA_M-pyrifera_M_contig113338.2787.1|Name=mRNA_M-pyrifera_M_contig113338.2787.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=816bp|location=Sequence derived from alignment at M-pyrifera_M_contig113338:27..434+ (Macrocystis pyrifera P11B4 male)
CTTGCAGCGATTGACAATGACCCTGAGCGGCTGAAGTGTGCCCAGCACAA
CGCAAAGGTGTACGGTGTGGAGGATAGGATCGACTTCATCCTGGGAGACT
ACTTCGACATCATCAAGCGCATTCGCGCCGACGTCGTCTTCCTCTCTCCT
CCCTGGGGCGGACCCGACTACCTGGACTCGGACGTCTTCGACGTACACGA
CATGGGTGGCATGGATGGGTCGGTGGTGATGCAGTACGCCCGCATGGCGA
GCCACAACATCGCCTACTTTCTTCCGAGAAACGTCGATAGTGTGCAGCTC
CTTGCGCTGGCTCCCGACAGCCGCTGCGAGGTGGAGGGTAACTACTTGAA
TGCCAAGCTCAAGACTGTGACTGCTTATTACGGGGACCTCATCTACGAGG
GTGAGGAACTTGCAGCGATTGACAATGACCCTGAGCGGCTGAAGTGTGCC
CAGCACAACGCAAAGGTGTACGGTGTGGAGGATAGGATCGACTTCATCCT
GGGAGACTACTTCGACATCATCAAGCGCATTCGCGCCGACGTCGTCTTCC
TCTCTCCTCCCTGGGGCGGACCCGACTACCTGGACTCGGACGTCTTCGAC
GTACACGACATGGGTGGCATGGATGGGTCGGTGGTGATGCAGTACGCCCG
CATGGCGAGCCACAACATCGCCTACTTTCTTCCGAGAAACGTCGATAGTG
TGCAGCTCCTTGCGCTGGCTCCCGACAGCCGCTGCGAGGTGGAGGGTAAC
TACTTGAATGCCAAGCTCAAGACTGTGACTGCTTATTACGGGGACCTCAT
CTACGAGGGTGAGGAA
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