mRNA_M-pyrifera_M_contig11331.2781.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig11331.2781.1
Unique NamemRNA_M-pyrifera_M_contig11331.2781.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig11331.2781.1 vs. uniprot
Match: D7FKM4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKM4_ECTSI)

HSP 1 Score: 437 bits (1124), Expect = 2.450e-150
Identity = 228/273 (83.52%), Postives = 244/273 (89.38%), Query Frame = 1 
Query:   22 MLSKPADLSALVALSQSKPKDFFVDNTLHVLVSKLLNCQNEQVSDKDTKLDVFAILANLSGSGDARTKQEVRTALQGVSEWFDDYLGGEQGDGLEQEPELHKSMLLLLARAWSYKLKTEDLLELTRGDRGLALDSVVGVLEDGKTYATELVQSRKPREGAVAQWEHELVCRQHEKPLVLQLCRLVRGFTHPASYFAGEGDACKS-----SRGGGVVTGEDLALFSVDEFSTEMDSLLEITLRSRVIEKLSVALNVCLFSPQGEREQHPELFQD 825
            MLS+PADLSALV LSQSKP++FFVD+TLHVLVSKLLNC+NEQVSDKDTKLDV AILANLSGSGDAR K+EVRTALQGVSEWFDDYL GEQGDGLEQEPELHKSMLLLLARAW+YKLKTEDLLELTRGDRGLALDSVVGVLEDG+TYATELVQSRKP EGAVAQWEHEL+CRQHEKPLVLQLCRLVRGFTHPASYFAG+G+   S     SRG      +DLALFSVDEFS EMDSLLEITLRSRVIEKLSVAL+ CLF  Q  +E  P + +D
Sbjct:    1 MLSRPADLSALVTLSQSKPEEFFVDDTLHVLVSKLLNCRNEQVSDKDTKLDVLAILANLSGSGDARAKEEVRTALQGVSEWFDDYLAGEQGDGLEQEPELHKSMLLLLARAWNYKLKTEDLLELTRGDRGLALDSVVGVLEDGRTYATELVQSRKPGEGAVAQWEHELICRQHEKPLVLQLCRLVRGFTHPASYFAGDGNPSSSKNRRHSRGTNGGNRQDLALFSVDEFSAEMDSLLEITLRSRVIEKLSVALDACLFCTQYGQEACPGMDED 273
[Close]
BLAST of mRNA_M-pyrifera_M_contig11331.2781.1 vs. uniprot
Match: A0A7S3XXU4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXU4_HETAK)

HSP 1 Score: 381 bits (979), Expect = 2.280e-127
Identity = 206/384 (53.65%), Postives = 261/384 (67.97%), Query Frame = 1 
Query:    1 RWQLNAAMLSKPADLSALVALSQSKPKDFFVDNTLHVLVSKLLNCQNEQVSDKDTKLDVFAILANLSGSGDARTKQEVRTALQGVSEWFDDYLG------GEQGDGLEQEPELHKSMLLLLARAWSYKLKTEDLLELTRGDRGLALDSVVGVLEDGKTYATELVQSRKPREGAVAQWEHELVCRQHEKPLVLQLCRLVRGFTHPASYFAGEGDACKSSRGGGVVTGEDLALFSVDEFSTEMDSLLEITLRSRVIEKLSVALNVCLFSPQGEREQHPELFQDEVRGEASVEGGSRRPNSGAPDDIGVSGGYDECRAPLEDSDHLAVHCVHIFMQNLYHYATQNTDFYRQHMLSDTLLVPRLILPYLDQCVRQARLLCHRRGPSSN 1134
            +WQLNAAMLS+P DLS LV +SQ  P++F VD+T+  LVSKLLN +++QV+DKDT+LDV  ILAN++     R K+ VR  + GVSEWF+ Y+        + GDG   +PELHK MLLLLARA++Y+LKTED+LELT GDR LAL+++VGVLE+G+TY+TEL Q +KP  G VAQWEHELVC ++EKPL+LQLCRLVRGFTHPA+YF G              TGEDL L+SVD+FS EMD LL I L+SRVIEKLSVAL  CLF+   E E+                                  G +  R  L++SDH A+  +H F+QNLY YAT NT+ YR H+L+DTLLVPRL+LPYLD+C+   +LL +RR  + N
Sbjct:   18 KWQLNAAMLSRPVDLSTLVTMSQQSPEEFLVDDTMERLVSKLLNTESDQVADKDTRLDVLTILANVAALPKRRAKEMVRDVIDGVSEWFESYMKEQDCKRDDDGDGSTSDPELHKGMLLLLARAFNYRLKTEDVLELTDGDRRLALETIVGVLEEGETYSTELKQRQKPATGKVAQWEHELVCHRYEKPLILQLCRLVRGFTHPATYFQG--------------TGEDLELYSVDKFSAEMDGLLAIALKSRVIEKLSVALYDCLFADLEEEEEEA--------------------------------GDENYRILLDESDHTAIVGIHTFIQNLYFYATSNTEAYRAHLLADTLLVPRLVLPYLDRCIYHTQLL-NRRAETYN 354
[Close]
BLAST of mRNA_M-pyrifera_M_contig11331.2781.1 vs. uniprot
Match: A0A7S3HBE5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HBE5_9STRA)

HSP 1 Score: 355 bits (910), Expect = 2.880e-117
Identity = 194/369 (52.57%), Postives = 256/369 (69.38%), Query Frame = 1 
Query:    1 RWQLNAAMLSKPADLSALVALSQSKPKDFFVDNTLHVLVSKLLNCQNEQVSDKDTKLDVFAILANLSGSGDARTKQEVRTALQGVSEWFDDYLGGEQGDGLEQEPELHKSMLLLLARAWSYKLKTEDLLELTRGDRGLALDSVVGVLEDGKTYATELVQSRKPREGAVAQWEHELVCRQHEKPLVLQLCRLVRGFTHPASYFAGEGDACKSSRGGGVVTGEDLALFSVDEFSTEMDSLLEITLRSRVIEKLSVALNVCLFSPQGEREQHPELFQDEVRGEASVEGGSRRPNSGAPDDIGVSGGYDECRAPLEDSDHLAVHCVHIFMQNLYHYATQNTDFYRQHMLSDTLLVPRLILPYLDQCVRQARLL 1107
            +WQL+AA+LS+P DL+ALV +S+S P+    DNTLH LVS LLN +N++ SDKDTKLDV  ILAN++ +G      E RTALQGVSEWFD+Y+  E+  G  QEPEL+K+M+LLLAR W YKLKTED+LELT+G+R +AL +VVG+LEDG+TY+TEL Q +KP +G + QWEHELV  ++EKPL++Q+CRL+RGFTHP +YF        SS        E++ALFSV+ F+ EMD+LLEITLRS ++EKLS+AL  CLF  + E         DE   ++S +G                         L + DH+A+  VH F+QNLY YAT+N + YR+HML +TLL+PRL+LPYLD+CV  A +L
Sbjct:   10 KWQLDAALLSRPVDLTALVTMSRSSPEMLIEDNTLHRLVSSLLNEKNDKKSDKDTKLDVLNILANVA-TGSRAAVAEARTALQGVSEWFDEYMAQEETTG-GQEPELNKAMVLLLARCWEYKLKTEDVLELTQGNRKIALCTVVGLLEDGETYSTELKQRQKPEQGKMGQWEHELVVHRYEKPLLMQICRLLRGFTHPGTYF-------DSST-------EEIALFSVERFAEEMDTLLEITLRSNLVEKLSMALYDCLFGDEEE---------DEAESKSSGDG------------------------TLSEFDHIAITAVHAFLQNLYFYATENIEEYRRHMLMETLLIPRLVLPYLDRCVIHATIL 329
[Close]
BLAST of mRNA_M-pyrifera_M_contig11331.2781.1 vs. uniprot
Match: A0A835Z5Y1_9STRA (U-box domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5Y1_9STRA)

HSP 1 Score: 345 bits (886), Expect = 8.240e-109
Identity = 198/391 (50.64%), Postives = 238/391 (60.87%), Query Frame = 1 
Query:    1 RWQLNAAMLSKPADLSALVALSQSKPKDFFVDNTLHVLVSKLLNCQNEQVSDKDTKLDVFAILANLSGS----GDARTKQEVRTALQGVSEWFDDYLGGEQGDG-----------------LEQEPELHKSMLLLLARAWSYKLKTEDLLELTRGDRGLALDSVVGVLEDGKTYATELVQSRKPREGAVAQWEHELVCRQHEKPLVLQLCRLVRGFTHPASYFAGEGDACKSSRGGGVVTGEDLALFSVDEFSTEMDSLLEITLRSRVIEKLSVALNVCLFSPQGEREQHPELFQDEVRGEASVEG-GSRRPNSGAPDDIGVSGGYDECRAPLEDSDHLAVHCVHIFMQNLYHYATQNTDFYRQHMLSDTLLVPRLILPYLDQCVRQARLL 1107
            +WQLNAA+LS PADLS+LV LSQ +P++FF D+TLH++VSKLLN  NE+ SDKD KLDV AI           G A  ++ VR  L GVSEWFD Y+  E+  G                    EPELHK+MLLLLARAW Y LKTEDLLELTRGDR LAL++V+GVLEDG+TY+TE+VQ +KP  G   QWEHELVCR+HEKP++LQLCRLVRGFTHPA+YF   G                     V  FS EMD+LL I LR+R +EKLSVAL  C F+                         G RR    AP              PL+++DH A+  +H F+QNLYHYA  + D YR HMLSDTLL PRL+LPYL +C  +A  L
Sbjct:   11 KWQLNAALLSSPADLSSLVTLSQHRPEEFFKDDTLHIMVSKLLNNSNERRSDKDAKLDVLAIXXXXXXXXXXXGGAAAREAVRLCLMGVSEWFDGYMEAEEAAGGYGGYGDASNFNNGDADARGEPELHKAMLLLLARAWDYSLKTEDLLELTRGDRRLALETVIGVLEDGETYSTEVVQRQKPGCGRAGQWEHELVCRRHEKPMLLQLCRLVRGFTHPATYFGSSGXXXXGD---------------VGAFSAEMDALLGIALRTRALEKLSVALYDCFFADXXXXXXXXXXXXXXXXXXXXXXXCGERR---AAP--------------PLQEADHQAIQSIHAFIQNLYHYAGSDADAYRAHMLSDTLLAPRLVLPYLKRCAVEAAAL 369
[Close]
BLAST of mRNA_M-pyrifera_M_contig11331.2781.1 vs. uniprot
Match: A0A7S1TRP6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRP6_9STRA)

HSP 1 Score: 342 bits (877), Expect = 1.400e-106
Identity = 197/401 (49.13%), Postives = 261/401 (65.09%), Query Frame = 1 
Query:    1 RWQLNAAMLSKPADLSALVALSQSKPKDFFVDNTLHVLVSKLLNCQNEQVSDKDTKLDVFAILANLSGSGDARTKQEVRTALQGVSEWFDDYL--------------GGEQGDGL-------EQEPELHKSMLLLLARAWSYKLKTEDLLELTRGDRGLALDSVVGVLEDGKTYATELVQSRKPREGA-VAQWEHELVCRQHEKPLVLQLCRLVRGFTHPASYFAGEGDACKSSRGGGVVTGEDLALFSVDEFSTEMDSLLEITLRSRVIEKLSVALNVCLFSPQGEREQHPELFQDEVRGEASVEGGSRRPNSGAPDDIGVSGGYDECRAPLEDSDHLAVHCVHIFMQNLYHYATQNTDFYRQHMLSDTLLVPRLILPYLDQCVRQARLLCHRRGPSSNN 1137
            +WQL+AAMLS+P DL+AL++LSQ+ P+ FF DN  H+LVSKLLN  +E+ SDKDTKLDV  IL NL+   + R K E+R  LQGV++WFDDYL               GE G  +       + EPELHK+ML+LLAR + YKLKTEDLLELT  +R LAL+ +V +LE+G+TY TEL Q + P  G+  AQWEH+LVC +HE+PL+LQ+CRL+RGFTHP++YF G      S R   V  G+D   + V+EFS EM SLL+IT+RS+++EKLSVAL             H  LFQD+V  +   + G+ R               D   + L +SDHLAV  +H ++QNLY YA ++T  +RQH+L++TLL+PRLILPYLD+C   A LLC +    + N
Sbjct:   11 KWQLDAAMLSRPVDLTALLSLSQTAPEQFFEDNVAHLLVSKLLNNADERRSDKDTKLDVLTILGNLATMKERRYKDEIRMVLQGVNKWFDDYLFSEEVRPNAAGALGNGEDGGDVGARVSLTKHEPELHKAMLVLLARCFDYKLKTEDLLELTGDNRILALEVIVSLLEEGETYTTELTQRQAPGGGSGPAQWEHQLVCMRHERPLILQMCRLLRGFTHPSTYFTG------SRR---VSEGKDEE-YDVEEFSKEMASLLQITVRSQLVEKLSVAL-------------HDVLFQDDVLDDGDEDYGAER--------------SDPYGSLLCESDHLAVAAIHEYLQNLYTYAAESTSIFRQHILTETLLIPRLILPYLDRCAAHAELLCLKSARETQN 374
[Close]
BLAST of mRNA_M-pyrifera_M_contig11331.2781.1 vs. uniprot
Match: F0YBB2_AURAN (U-box domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YBB2_AURAN)

HSP 1 Score: 328 bits (840), Expect = 4.830e-97
Identity = 181/377 (48.01%), Postives = 248/377 (65.78%), Query Frame = 1 
Query:    1 RWQLNAAMLSKPADLSALVALSQSKPKDFFVDNTLHVLVSKLLNCQNEQVSDKDTKLDVFAILANLSG--SGDARTKQEVRTALQGVSEWFDDYLGGEQG------DGLEQEPELHKSMLLLLARAWSYKLKTEDLLELTRGDRGLALDSVVGVLEDGKTYATELVQSRKPREGAVAQWEHELVCRQHEKPLVLQLCRLVRGFTHPASYFAGEGDACKSSRGGGVVTGEDLALFSVDEFSTEMDSLLEITLRSRVIEKLSVALNVCLFSPQGEREQHPELFQDEVRGEASVEGGSRRPNSGAPDDIGVSGGYDECRAPLEDSDHLAVHCVHIFMQNLYHYATQNTDFYRQHMLSDTLLVPRLILPYLDQCVRQARLL 1107
            +WQL+AA+LS+P DL+ALV+LSQ+ P DFF D+TL  +V  LLN  ++  SDKDT+LDV  +L+NL+G  S D R +Q ++ AL G++EWFD+Y+  E+          E EPELHK MLLLLAR + YKLKTEDLLEL R D+ L L++VVG+LEDG+TY TEL + + P  G + QWEH+LVC +HEKPL+LQLCRL+RGFT P SYF    D            G +++   V+EF+ EM+ LL+IT++SR++EKL++A + CLF+P                 + + + G R P+  +           E    L D DH ++ CVH F+QN+Y YAT  T  YRQH+L+DTLL+PRL+LPYLD+ V++A  L
Sbjct:   12 KWQLDAALLSRPVDLTALVSLSQTSPDDFFHDDTLSRMVKLLLNAVDDTRSDKDTRLDVLTVLSNLAGAVSEDDRLEQ-IKMALDGINEWFDEYMAREEARIAEGTTATEVEPELHKLMLLLLARLYGYKLKTEDLLELVRSDKILGLETVVGLLEDGETYTTELHRKQAPSLGRMGQWEHKLVCHRHEKPLILQLCRLLRGFTLPQSYFGTASD------------GAEISEHDVNEFTNEMNLLLDITIKSRLVEKLALACHECLFAPF----------------DGNPDEGPRSPSEPS-----------EASTSLVDDDHKSIACVHSFLQNMYFYATNRTLDYRQHLLADTLLIPRLVLPYLDRSVQRASQL 348
[Close]
BLAST of mRNA_M-pyrifera_M_contig11331.2781.1 vs. uniprot
Match: A0A7S4E3X3_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E3X3_9STRA)

HSP 1 Score: 300 bits (767), Expect = 6.780e-92
Identity = 169/372 (45.43%), Postives = 229/372 (61.56%), Query Frame = 1 
Query:    1 RWQLNAAMLSKPADLSALVALSQSKPKDFFVDNTLHVLVSKLLNCQNEQVSDKDTKLDVFAILANLSGSGDARTKQEVRTALQGVSEWFDDYLGGEQGDGLEQEPELHKSMLLLLARAWSYKLKTEDLLELTRGDRGLALDSVVGVLEDGKTYATELVQSRKPREGAVAQWEHELVCRQHEKPLVLQLCRLVRGFTHPASYFAGEGDACKSSRGGGVVTGEDLALFSVDEFSTEMDSLLEITLRSRVIEKLSVALNVCLFSPQGEREQHPELFQDEVRGEASVEGGSRRPNSGAPDDIGVSGGYDECRAPLEDSDHLAVHCVHIFMQNLYHYATQNTDFYRQHMLSDTLLVPRLILPYLDQCVRQARLL-CH 1113
            +WQL+AA+LS+P DL+ALV+LSQ+ P DF+ D+TL  +V  LLN ++++ +DKDT+LDV  IL+NL+ S + + + ++R AL  V+++ + YL  E       EPELHK MLLLLAR + Y +KTEDLLEL RGDR L L++VVG+LEDG+TY TEL + + P  G + QWEH LVC +HE PLVLQLCRLVRGFT P SYFA                GE L    +  F+ EM+ LLEITL+SR++EKLS+A    LF+                                + DD             L++ +H ++ CVH F+QN+Y YAT  T+ YR+H+L DT L+ RL+LPYL++   QA  L CH
Sbjct:   51 KWQLDAALLSRPVDLTALVSLSQTSPDDFYEDDTLSRMVKLLLNAESDKKADKDTRLDVLTILSNLAASSEGKRRDDIREALDNVNDFMEQYLEKESSGS---EPELHKLMLLLLARCFEYSIKTEDLLELCRGDRALGLETVVGLLEDGETYTTELRRKQAPAMGRMGQWEHRLVCHRHETPLVLQLCRLVRGFTLPQSYFA---------------AGEKLLEKDIASFNDEMNLLLEITLKSRLVEKLSLACYEGLFAV-------------------------------SDDD-------------LKEDEHRSIACVHSFLQNMYFYATSKTEVYRRHLLCDTPLIQRLVLPYLERGAAQAASLQCH 360
[Close]
BLAST of mRNA_M-pyrifera_M_contig11331.2781.1 vs. uniprot
Match: A0A812XB91_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812XB91_SYMMI)

HSP 1 Score: 278 bits (710), Expect = 4.210e-88
Identity = 151/298 (50.67%), Postives = 197/298 (66.11%), Query Frame = 1 
Query:  223 KQEVRTALQGVSEWFDDYLGGEQGDGLEQEPELHKSMLLLLARAWSYKLKTEDLLELTRGDRGLALDSVVGVLEDGKTYATELVQSRKPREGAVAQWEHELVCRQHEKPLVLQLCRLVRGFTHPASYFAGEGDACKSSRGGGVVTGEDLALFSVDEFSTEMDSLLEITLRSRVIEKLSVALNVCLFSPQGEREQHPELFQDEVRGEASVEGGSRRPNSGAPDDIGVSGGYDECRAPLEDSDHLAVHCVHIFMQNLYHYATQNTDFYRQHMLSDTLLVPRLILPYLDQCVRQARLLCHR 1116
            K EVR AL G+SEWFD+Y+  E+ D   QEPELHK+M+LLLAR W+YKLKTED+LELT+G+R +AL +VVG+LEDG+TY T L Q +KP+EG +AQWEHEL   + EKPL++Q+CRL+RGFTHP +YF    D              +LAL+SV+ FS+E+++LLEITLRSR++EKL VA+  CLF    E  Q  E  +  V                                 LED+DH+AV  VH  +QNLY YA+ N D +R+HML DTLL+PRLILPYL+ CV++A +L +R
Sbjct:    4 KAEVRVALGGISEWFDEYIVNEEADAT-QEPELHKAMVLLLARCWNYKLKTEDVLELTQGNRQIALCTVVGLLEDGETYTTSLKQRKKPQEGQMAQWEHELNIHRFEKPLLMQVCRLLRGFTHPGTYFEASTD--------------ELALYSVERFSSEINTLLEITLRSRLVEKLCVAMYSCLFDEVDENGQEVEDIEQRV---------------------------------LEDTDHMAVMSVHAVLQNLYFYASHNHDEFRRHMLVDTLLIPRLILPYLNCCVQEAMMLNNR 253
[Close]
BLAST of mRNA_M-pyrifera_M_contig11331.2781.1 vs. uniprot
Match: A0A7S1TRR0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRR0_9STRA)

HSP 1 Score: 275 bits (703), Expect = 1.750e-86
Identity = 159/311 (51.13%), Postives = 208/311 (66.88%), Query Frame = 1 
Query:    1 RWQLNAAMLSKPADLSALVALSQSKPKDFFVDNTLHVLVSKLLNCQNEQVSDKDTKLDVFAILANLSGSGDARTKQEVRTALQGVSEWFDDYL--------------GGEQGDGL-------EQEPELHKSMLLLLARAWSYKLKTEDLLELTRGDRGLALDSVVGVLEDGKTYATELVQSRKPREGA-VAQWEHELVCRQHEKPLVLQLCRLVRGFTHPASYFAGEGDACKSSRGGGVVTGEDLALFSVDEFSTEMDSLLEITLRSRVIEKLSVALNVCLFSPQGEREQHPELFQDEVRGEASVEGGSRR 867
            +WQL+AAMLS+P DL+AL++LSQ+ P+ FF DN  H+LVSKLLN  +E+ SDKDTKLDV  IL NL+   + R K E+R  LQGV++WFDDYL               GE G  +       + EPELHK+ML+LLAR + YKLKTEDLLELT  +R LAL+ +V +LE+G+TY TEL Q + P  G+  AQWEH+LVC +HE+PL+LQ+CRL+RGFTHP++YF G      S R   V  G+D   + V+EFS EM SLL+IT+RS+++EKLSVAL             H  LFQD+V  +   + G+ R
Sbjct:   11 KWQLDAAMLSRPVDLTALLSLSQTAPEQFFEDNVAHLLVSKLLNNADERRSDKDTKLDVLTILGNLATMKERRYKDEIRMVLQGVNKWFDDYLFSEEVRPNAAGALGNGEDGGDVGARVSLTKHEPELHKAMLVLLARCFDYKLKTEDLLELTGDNRILALEVIVSLLEEGETYTTELTQRQAPGGGSGPAQWEHQLVCMRHERPLILQMCRLLRGFTHPSTYFTG------SRR---VSEGKDEE-YDVEEFSKEMASLLQITVRSQLVEKLSVAL-------------HDVLFQDDVLDDGDEDYGAER 298
[Close]
BLAST of mRNA_M-pyrifera_M_contig11331.2781.1 vs. uniprot
Match: A0A8J2WX56_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WX56_9STRA)

HSP 1 Score: 229 bits (584), Expect = 1.370e-63
Identity = 148/384 (38.54%), Postives = 213/384 (55.47%), Query Frame = 1 
Query:    1 RWQLNAAMLSKPADLSALVALSQSKPKDFFVDN-TLHVLVSKLLNCQNEQVS-DKDTKLDVFAILANLSGSGDARTKQEVRTALQGVSEWFDDYLGGEQGDGLEQ------EPELHKSMLLLLARAWSYKLKTEDLLELTRGDRGLALDSVVGVLEDGKTYATELVQSRKPREGAVAQWEHELVCRQHEKPLVLQLCRLVRGFTHPASYFAGEGDACKSSRGGGVVTGEDLALFSVDEFSTEMDSLLEITLRSRVIEKLSVALNVCLFSPQGEREQHPELFQDEVRGEASVEGGSRRPNSGAPDDIGVSGGYDECRAPLEDSDHLAVHCVHIFMQNLYHYATQNT---DFYRQHMLSDTLLVPRLILPYLDQCVRQARLLCHRR 1119
            +W  +A+MLS P DLS LV++S   P+D   ++  L  +V  +LN    +    +  +LDV AI+AN + + D   K  V+ AL  V+EWFD+Y+  E+G+ +++      EPELHK+ML+LL RA+ YKLKTEDLLEL RG R LAL++V G+LEDG+  AT + Q     E   A WE  +V ++ E+ L+ Q C L+RGFTHP++YF    +         +  G DL   SV++F+ EM  LL +T+  R++EKLS AL             H  LF+ E+R                                L + +H A+   H F+QNLY Y    T   + YR H++ DT+LVP L+LPYL++CV  A++L HRR
Sbjct:   54 KWLFDASMLSSPMDLSPLVSMSLDAPEDVVGESGLLKRMVKTVLNGPGVRNRVGRQARLDVLAIMANCALTTDPVRKAAVQDALMDVTEWFDEYMA-EEGNEMDRSTEETPEPELHKAMLVLLCRAFDYKLKTEDLLELCRGHRKLALETVTGLLEDGEALATGVAQKNAASEHERAVWEKVVVSQKWERSLIAQTCGLLRGFTHPSTYFKALDEGFYF-----LECGVDLPEHSVEQFTVEMQGLLAVTMNQRLVEKLSYAL-------------HDALFEGEMR-------------------------------ILTNKEHAAIIAAHTFLQNLYLYGGSTTVMAELYRTHLICDTVLVPHLVLPYLERCVHHAQVL-HRR 386
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11331.2781.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
D7FKM4_ECTSI2.450e-15083.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3XXU4_HETAK2.280e-12753.65Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3HBE5_9STRA2.880e-11752.57Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A835Z5Y1_9STRA8.240e-10950.64U-box domain-containing protein n=1 Tax=Tribonema ... [more]
A0A7S1TRP6_9STRA1.400e-10649.13Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
F0YBB2_AURAN4.830e-9748.01U-box domain-containing protein n=1 Tax=Aureococcu... [more]
A0A7S4E3X3_9STRA6.780e-9245.43Hypothetical protein (Fragment) n=2 Tax=Pelagomona... [more]
A0A812XB91_SYMMI4.210e-8850.67Hypothetical protein n=1 Tax=Symbiodinium microadr... [more]
A0A7S1TRR0_9STRA1.750e-8651.13Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A8J2WX56_9STRA1.370e-6338.54Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11331contigM-pyrifera_M_contig11331:1959..9948 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score317.4
Seed ortholog evalue1e-83
Seed eggNOG ortholog44056.XP_009037706.1
Hectar predicted targeting categoryother localisation
EggNOG OGs28N4Y@1,2QUQ3@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons11
Model size1269
Cds size1248
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11331.2781.1prot_M-pyrifera_M_contig11331.2781.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig11331 1980..9948 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815648.1549447-UTR-M-pyrifera_M_contig11331:1958..19791622815648.1549447-UTR-M-pyrifera_M_contig11331:1958..1979Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11331 1959..1979 +
1692277504.0689769-UTR-M-pyrifera_M_contig11331:1958..19791692277504.0689769-UTR-M-pyrifera_M_contig11331:1958..1979Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11331 1959..1979 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815648.1722527-CDS-M-pyrifera_M_contig11331:1979..20391622815648.1722527-CDS-M-pyrifera_M_contig11331:1979..2039Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11331 1980..2039 +
1692277504.0818644-CDS-M-pyrifera_M_contig11331:1979..20391692277504.0818644-CDS-M-pyrifera_M_contig11331:1979..2039Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11331 1980..2039 +
1622815648.1878252-CDS-M-pyrifera_M_contig11331:2942..30591622815648.1878252-CDS-M-pyrifera_M_contig11331:2942..3059Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11331 2943..3059 +
1692277504.0917423-CDS-M-pyrifera_M_contig11331:2942..30591692277504.0917423-CDS-M-pyrifera_M_contig11331:2942..3059Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11331 2943..3059 +
1622815648.1982753-CDS-M-pyrifera_M_contig11331:3492..36031622815648.1982753-CDS-M-pyrifera_M_contig11331:3492..3603Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11331 3493..3603 +
1692277504.1011472-CDS-M-pyrifera_M_contig11331:3492..36031692277504.1011472-CDS-M-pyrifera_M_contig11331:3492..3603Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11331 3493..3603 +
1622815648.2122972-CDS-M-pyrifera_M_contig11331:4271..43281622815648.2122972-CDS-M-pyrifera_M_contig11331:4271..4328Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11331 4272..4328 +
1692277504.1112037-CDS-M-pyrifera_M_contig11331:4271..43281692277504.1112037-CDS-M-pyrifera_M_contig11331:4271..4328Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11331 4272..4328 +
1622815648.2278223-CDS-M-pyrifera_M_contig11331:4743..48031622815648.2278223-CDS-M-pyrifera_M_contig11331:4743..4803Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11331 4744..4803 +
1692277504.1234643-CDS-M-pyrifera_M_contig11331:4743..48031692277504.1234643-CDS-M-pyrifera_M_contig11331:4743..4803Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11331 4744..4803 +
1622815648.2444334-CDS-M-pyrifera_M_contig11331:5204..53031622815648.2444334-CDS-M-pyrifera_M_contig11331:5204..5303Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11331 5205..5303 +
1692277504.1317642-CDS-M-pyrifera_M_contig11331:5204..53031692277504.1317642-CDS-M-pyrifera_M_contig11331:5204..5303Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11331 5205..5303 +
1622815648.2600937-CDS-M-pyrifera_M_contig11331:6160..63401622815648.2600937-CDS-M-pyrifera_M_contig11331:6160..6340Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11331 6161..6340 +
1692277504.1399934-CDS-M-pyrifera_M_contig11331:6160..63401692277504.1399934-CDS-M-pyrifera_M_contig11331:6160..6340Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11331 6161..6340 +
1622815648.2732816-CDS-M-pyrifera_M_contig11331:6701..68401622815648.2732816-CDS-M-pyrifera_M_contig11331:6701..6840Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11331 6702..6840 +
1692277504.148808-CDS-M-pyrifera_M_contig11331:6701..68401692277504.148808-CDS-M-pyrifera_M_contig11331:6701..6840Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11331 6702..6840 +
1622815648.28617-CDS-M-pyrifera_M_contig11331:7954..81211622815648.28617-CDS-M-pyrifera_M_contig11331:7954..8121Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11331 7955..8121 +
1692277504.156843-CDS-M-pyrifera_M_contig11331:7954..81211692277504.156843-CDS-M-pyrifera_M_contig11331:7954..8121Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11331 7955..8121 +
1622815648.2979167-CDS-M-pyrifera_M_contig11331:8701..88051622815648.2979167-CDS-M-pyrifera_M_contig11331:8701..8805Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11331 8702..8805 +
1692277504.1676152-CDS-M-pyrifera_M_contig11331:8701..88051692277504.1676152-CDS-M-pyrifera_M_contig11331:8701..8805Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11331 8702..8805 +
1622815648.3087711-CDS-M-pyrifera_M_contig11331:9794..99481622815648.3087711-CDS-M-pyrifera_M_contig11331:9794..9948Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11331 9795..9948 +
1692277504.175515-CDS-M-pyrifera_M_contig11331:9794..99481692277504.175515-CDS-M-pyrifera_M_contig11331:9794..9948Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11331 9795..9948 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig11331.2781.1

>prot_M-pyrifera_M_contig11331.2781.1 ID=prot_M-pyrifera_M_contig11331.2781.1|Name=mRNA_M-pyrifera_M_contig11331.2781.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=416bp
MLSKPADLSALVALSQSKPKDFFVDNTLHVLVSKLLNCQNEQVSDKDTKL
DVFAILANLSGSGDARTKQEVRTALQGVSEWFDDYLGGEQGDGLEQEPEL
HKSMLLLLARAWSYKLKTEDLLELTRGDRGLALDSVVGVLEDGKTYATEL
VQSRKPREGAVAQWEHELVCRQHEKPLVLQLCRLVRGFTHPASYFAGEGD
ACKSSRGGGVVTGEDLALFSVDEFSTEMDSLLEITLRSRVIEKLSVALNV
CLFSPQGEREQHPELFQDEVRGEASVEGGSRRPNSGAPDDIGVSGGYDEC
RAPLEDSDHLAVHCVHIFMQNLYHYATQNTDFYRQHMLSDTLLVPRLILP
YLDQCVRQARLLCHRRGPSSNNQTGNGWTHEESVSAGIQEEGRGGGGEQE
AGAEAALAQGIASSLR
back to top

mRNA from alignment at M-pyrifera_M_contig11331:1959..9948+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig11331.2781.1 ID=mRNA_M-pyrifera_M_contig11331.2781.1|Name=mRNA_M-pyrifera_M_contig11331.2781.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7990bp|location=Sequence derived from alignment at M-pyrifera_M_contig11331:1959..9948+ (Macrocystis pyrifera P11B4 male)
AGGTGGCAGCTGAATGCGGCTATGCTGTCGAAACCCGCAGATCTATCAGC
TCTGGTAGCCTTAAGCCAGAGCAAACCCAAGGTACGTGTACCTGGTATTC
TATAAGCGGCATTGAGGATATTCTGCCATCTGACTGTCGGGTGTCGCTAC
GTAGAGGAGCCGGATGTGAACCGGTCCGACGTCCGGCAGGCTGCGGGCTT
GTCGGAGAACAGATTAATGTATGGTAGACGTGTGCATGAACTACGCCCTG
CATGGAAGTGATACAGTACTTACACGGATGCCCATGTAAACATCACTTTG
TTCGTTTATAAAAGATAAACCGCACGTGTCGTTTCCTGGAGACGTGCCCC
ACCAGAACTAGAGGTATCTCCCCGAAACGTGCGATGCATGCGCGAATCGT
ACCAATAGTAGTGTCCTGGTGGTGTTTCTCCTTTCGGTCTCTTTTCAGAC
GGCGAGCATTTCGATTCGGGGACTGAATACCTGATACATGGTAGAAAAAC
AGAAGCTGGGAACTTACGCCGTCATGGGTCATTCAGGTAGTTCTTGTAAA
ACATCCAATGACAGATCTATTGGCGTGACCCGTGTACATAGCCCTGTCTG
GACCAGTCCCTGGGTAATGCTTCAGTATTTCGCGACAGCACCCACGTCAT
GCACGGCCAAGCTGTGTTAACAAGCTACAAAAAAGGAGCTTGGCTGAGAA
GGACTTGCTACTGGTGTATCTAAGTATTAGGGGGGTCCATAGTAAAAAGG
ACCAGTACTGTTATTAAAATAGGTAAATATATATGTTTGTGTGTACCGTA
GGTCCTATTAACTATGGTCCCCCGTAATAGTACAGGCCAACACTGGCATG
AAGCGTTTGACGTTGAAGGAACCGATCGGAAGCTTGGGCGCCTCTGAATG
CTTTATTTATATCAAGGTTTGTACGCGAACACGGCGTCCTTGCTCACAAG
TTGAAGAAGTTGATGCGTGTCCCCTTAACAACAGGACTTTTTCGTGGACA
ATACGCTGCACGTCCTGGTGAGCAAGCTTCTCAACTGCCAAAACGAGCAG
GTGTCCGACAAAGACACCAAGCTAGACGTTTTCGCCATCCTGGCCAATCT
CGTGAGTACCACCCCAATAGCAAGAGCCGCTAAACATATGACTTTGGTGC
GACAATGTCTGCGTATCGTACCTGGTACCTTGTGCGTTGTAAACCTGGTT
TGGGCTGGACGTCACCATACATGAGGAAAGAGATGAGCCGGTAGTACGGA
ATGGACCCGATCCAGCTATCATTCGAAGAGGGGCCTAATGGTGCCGATTT
GCCACGAGCACTGCAAAAGAACGCAAGTCGGGACACAGCAGTGGAATCAC
CCCTCGTCGGCAGATTCTGTCTCCTGATAGCGCCCAAATAATCGCCAATA
TGGAACATTGGAATACGCTATCAGACACATGGTCTAAGTTGGAAATAAAA
TGTTTCGTGCTATATCATGTGCTCGTGGATGGCGATAGGTTGAATCAAAT
GACCCTGTCCTGCCCAATGTACAACCTTTTCCAGTCTGGCTCGGGGGATG
CCCGCACGAAGCAAGAAGTCCGGACTGCCTTACAGGGTGTAAGCGAGTGG
TTCGATGATTACCTAGGGGGGGAGCAAGGAGACGGCCTGGAACAGGTAGG
CATGCTGCTTACCGATACCACAGGGCATCGTTAGCTTGGAACCGCTCCCA
CGTTCAATTTGTTGTCGGGTGTGTATACTGGGCTACTTGGCACCGTAGAC
ACACAGGAATTCGATACAAAAATAATGCCACGGATTACTCCCTAGCACCG
AATTGTGTCGGGTACATAATTCGCTATTTGGCGCCGCCGGCGCACAGGAG
TGCGATATGTGCATATCCCTGCGGATTTCTCCCTAACATCGACTTGTGGT
ATTGTCATGGGCAGAACCGCATGTTCAAAATAATTAAACAGCACAGCAGC
AGCCAACTGACTCGTCTGCGATGCACACCTGCCAACACAGTTGTGAGAGC
GGAAAGTTGTACCAGGTTTGTCGATATATGTGTATTTGGTCAATGCTTGA
ATCCCCCCATCTCTTAGACCGGGTCGCCTGCGGCATGTTAGAGACTGAAC
TAGCTGTAGAGCCCTATGAAAAACGTTGAACGTTCACACCTGGCGTGTGT
TGTAAGCGAGAAAGTCGCTTTGTCCAGTGCATCAAAACAATATTCTAGAC
TAGCTCATGGTTTGCTCGGATGCTCCATGCAGACAGGGGGGTGCTACGGG
TTAATTATTAGCCGTTCGGATTGATCTCTTTTCCGCTACAATTATGCTCT
GACCGCTCCGCAGGAACCAGAGCTGCACAAGTCGATGCTTCTACTACTGG
CTAGGGCTTGGAGCTACAAGGTGCACGATCTACAAGCACGTTGGGGTTAC
AAAGAAATTTTGGGGCGAGTTAACTTGCACCAGATGGAAATAGCGTATTT
TCAGCCCGTTTTCCCATGCGCTCACCCGTCACCACGATACGAACACTTGT
TTCTTTCCGAATGTTGCGTTTGATGCCCAGATTGTCCCCTGACTTGCGCG
ATTCTCGCGTGCGTCTCCCGCGTTTTCACTCCGCACTTGACCAAACCCCG
CTGTCAAGTTTTACCTCAGCATCCCTGACTCGCCCCATAAACCGGCCGCC
GACGAGTAAACCAACCGGTTGATCAATCTACCGCAAGCCCGAACATTTAG
GATAATTGTTGACTGCAAACATTTATATCCGACTACCGCTCGGCCGATCA
AACGCCCGACCCGAAACAACTCTTGGGTCTGGAAGCTCAAGACTGAGGAT
CTGCTGGAACTGACCCGTGGCGATAGGGGTCTCGCTCTAGATTCGGTGAG
CGTACTTCTTGCTACTTGCAAGGTGACACGGACATTTGGTGCTGCCACAC
TAGGCCGGCATCTCACTTTCGGTAGATGTCTCTAGCTTGACTCCGGTACA
CAGACGCCATACGATGGCCTCGAAGAGTCTGAAGCGTAAGAAATGTATCA
TGTGTTCGTAAGGGCCCATCTTGTCGAGGACGTTCGGTTCTTTCAATTTG
AATTGAATTTTTTTCTAATTTAATTCAAGGGCCCATCTTATCGAGGACTT
TCGGTTCTTTCAATTTGACTTGATTTTTTTTTCTAATTAAATTTGCATCT
GATTGAACGAAATTTAGCGTTCCCCGTTAAGATGGGCTCTAAGGGTTTTT
TCTTTTCTGCCCGCAATACGTGAAACGATCTGCCCTGCCATCGCAGGTGG
TGGGAGTCCTCGAAGACGGAAAGACCTACGCGACCGAGCTCGTCCAAAGC
CGTAAGCCGAGAGAGGGGGCCGTGGCGCAGTGGGAGCACGAGCTGGTCAG
TTGTTCCCCATTCTGCGACTGTCAACCACTATACTGCTCTTCGATAGAGT
GATGGTGTTCGTATATGTAGCGAGACGGTAGACAGAAGTAGAGTTAGGGC
GCTCCTGTAAGGGTGTGTATTTCTGCTCCGGAGAGAGGCTACACACGCCT
CCAACTTCTACCTCTGTCCTAGACTTCTGAAACCCCACATTCGTGGGTAT
GCAAATGTACGCAGTAGGTAACCCTTGCGTCGTTGATTGTGGCCCACGTA
TTTTGAGAAACTCACAAACGACTAAAAAATACATGGCCAAGGGTACCAGC
GGCATCTGAAGGCGGTGCCGTGCTAGAATCGACGTTGACATGCTTCCGCC
AAGGGGGGAGCGACAATGAGCTGTGTTTGACAGTTGTAGTTTTGTAATCA
AGACGGGTCGGTTTCATGCACGGACTTGTGAAAAGAGAGCGAATGCTGCG
GCCACGACTACGTAACCGGAACACAATCGTGCACGGAACCGCCGCAAGAT
GCGCTTTGAAAAGTTGCGTTGGTTGTGTGTCCGCACCACGGTGCTTGGAA
CCTAACCCGGCACCCTCGCGACAAGAGGCTTCTGATTAATTTAGCCCCCA
TCACAGCAGGCCACCCCCATGAGCACACCATGATACCGAGACAGCCAGTA
GCATTAGCACGGTACCAAGGATAATCTGGCTAGCTAAAGCTACTACCAGC
CCCACCTCGCCAGCCAGAAAAACAAGTACTTAACGACACGTGTGATTCGA
GGTACAGCAGAAACAATACGGCGAGGACAGCAGTAATGGTTGTTTTGCCC
TTGCCCCCTGCTTGAAAACCCCGAATTCCGGCGTACTCTTTCGCTTCTGC
AGGTTTGCCGTCAGCACGAAAAACCTTTGGTTCTTCAGCTGTGCCGTCTG
GTGCGGGGCTTCACACACCCGGCCTCTTACTTCGCGGGGGAGGGTGACGC
CTGCAAAAGTAGTCGTGGTGGTGGGGTGGTCACCGGGGAAGATTTGGCCC
TGTTCTCGGTGGACGAATTCAGTACCGAAATGGTGAGCTCTTTCCCTGCC
GTATTCTACGCATCAACCAAGTCCCCTTCAGGAGGAAAACAGGTTGAAAG
GGTCGCAGCAAACGACAGCGAGAGCTCCCCGTTTAGGCCTCTGGAGGTGT
AGCGCTAAGTGCGCGGCGAGTGGCGCGTGGTCATTTTGCACCATGAAGAG
CGTTCATCTGAAGAATTGTTCCTGGGTTTTCGCCTGCGAGTGTGCACGCC
CTTTGTTGACAGGCGAAGGGGCATCCATTGCGTTCGTGGACCGCGTGCGA
TCCTTCCTTCGTCGTGCCTTTTTCGTTGCGTACCCTATCCGCCCCCTCAT
GGCTGATACCTCGTGCTACGCCTTGTATCCATGCGCCCTGCAGGATAGCT
TGTTGGAAATAACCCTGCGCTCGAGAGTGATCGAGAAGCTGTCCGTGGCC
CTCAACGTGTGCCTGTTTTCTCCGCAAGGCGAGAGGGAGCAGCATCCCGA
ACTTTTCCAGGATGAGGTAAGAGGGGAGGCAAGTACCTCGCACCTCTATC
TAATGGCGTAGAACAGCCGAATTATACTACAGTAGCACGGACACCGAGCA
AGGAGCATACTGGACACTGGGTATTCTGTAAGGATAAACATCGAAGCTAC
CGTATCAATGAAGAAACTCGATGAAACCCCGCCCCCTATTTTGGTAGGAA
GCACCTCGGTCTTGAGGCTATGATACGTGCAAACGGGCAGGAGTGAAAAG
CCTCGGTGGGATTTTTGCGTTTTATTTCTACGCCTCAGACGATGCGTGGG
CATGTCTATAGGGGGAAGTAGCCATACCTTTGCCTTCGCTGTAGCGCCCG
TATCAACGTAGCGCATGAAGAGCAATATCACCTTGATACCAAATGTACAA
CGGATAGTCTTATGAGGTCTCTTTTGTACCCATCAGATCTATAGCTAAAC
GGGGTGGGACAGAGAGCACTTCGGTACCTTAAACAGCTTCCCTCGCGAGA
CGTTTAGGTTTGCCTCAAATATGCGGTGTTTGGTAATAAACGCGACGGTC
GGCTTACACTGTTAACAGCGCCATTCTTTAGTCAGCAGCAACACATTCCG
AACAGTGCTCTTCGAGGAGACAACAGAATGCCCAAATCTCCAGACTGTAT
TTCTTTGTACTGCTGGAAAATGTATCCTACACAATTCCCAAGCAGTCGAC
TGTCTTCAAAAGCGTGGGTACAGACCTAAACATGTGATCGATCGAAAATT
CTCCACCCCCTCACGAGTCTACGGTCGTCCGACTACGGCCAAGCATGGTA
TCTAGTACACCCCCCCCCCGTTCTTAGCAGGATGCAGCTCACCGTCCACG
CCCAACGGCTCACGGCGCTCCGCGCTTGGTGCAAGCAATGCCTGCTTGGT
CGGTGAAAACCCGACGTGCTCCGTCCCAGCATTGTAGGGATGCGAGGGTC
TATGGTCCTACGACTACGGCCATGCATGCCAATCCCCCTCCGGCTGACCA
ACTTACTCTGAGAAGGAACGATCCTATCCTGCAGAACAAGTATACCTTTG
GAAGGCCTCGTTAGTCCTCGCCGGCACACGCCTTGCTGCAACGCTGTATT
GGAACCAAACCTCAGGGCAGCAATTCGGAAGGAAGACATGCCCAAGGCGT
CGAGGGTGGCAGCAGACGCCCTAACAGCGGCGCGCCCGATGATATTGGCG
TCAGTGGCGGATACGACGAGTGCCGGGCGCCTCTGGAGGATAGCGACCAC
CTCGCCGTGCACTGTGTGCACATCTTCATGCAGAACTTGTATCACTACGC
CACTCAGAACACGGTGAGCCTTGGCCTCCACTGGTGTACCGTGCAGCTAG
CTGCCCAATTCCTGCCTGGGACGTGGCGCCGCCTAGGGAGCTGCACTCTA
CAATGTTCGTGCGATTTGATACGAATAGCATGGGGAAAATATGTGTCTTT
TTCATAGTCAGTAGTTTACTCTGGTCTGGAGAGCATGGTATCAAGGCGGA
AATCAAGTACGTTCAAGTTCAGACCGCTACGCGATCGCTAGCACGTCATC
GGGGCCAAATATCTGTGGACCGCTTCGCGCTAGGTGCAGGCAATGTCTGC
CTGGTTGGTGAAAACCCGACGTGCTCCGTCCCGGCATAGTAGGAATGCGA
GGGTCTACGGTCATACGACTACGGCCATGCACGATATTGGGTACACCCCC
CCCCCACCCTACCGTCTCGAAAGGGATTCGTGGTCAATTGTCAAATGACT
AAGGCAAGCAACAAATGAGTACGCCCCCCCTCCCCCCCCCTACCGACCAC
CACCACCACCACTCAAGGACGCGTAGTCAACAGCCTAGCCGCTGAGGCAG
ATACCCTGTAAGCGCAACTTTCCTGTGCCCTCGCGTTGGACAGGATTTTT
ACCGGCAACACATGCTGAGCGATACATTGCTCGTGCCTAGGCTAATCCTA
CCATACCTGGACCAGTGCGTGCGGCAGGCACGACTTCTGTGCCACAGGTG
AGCCGTGAAATACCGATCTACGAAACAACATCCGACTAGCATGGTTTGTC
GAATGTTATTATTCAGAATGGTAGTTCTGGCCTTGGAGGTGGCCGATCTA
CGAAAGTGCGGCCAAACTCGATGGGTTTCCCGGATGCTGGCTCGTGGCTC
GGAGGTCGCCGATCCACGAAACTACATCCATCTGGCACAGCTTCTCGGAT
GCTAGGTCAGGCCTCGGAGATCGACGATCTACGAAATTACACCGAAATGG
GATGGTTGACCGAATGCTACAAGAGTAGCTCAGGCCTGGGAGGTGGCCGG
ATCTACGAAACTGCAGCCAAACTCGCATTAGTTCCCGAAAGCTAGCTCAG
GTCCCGGAGGTCGCCGATCTACCAAACTGCAGCCAAACTCACATTATTTC
CCGAATGCTATAGAAATAGCCCAGGCCCCGGTGGTCTCCGATCTACGAGA
TAACATCCGACTATTACGGGGGTCCGTAGTTAACAGGACCAAATATGGTT
AGTAAAAATACCTAAATATATAGGTTTTTATGTATACCATAGGTTCTGTT
AACTATAGACCCCCGTAATAGCATGGTTCCCCGAATGCCACTAATAGCTC
GGGCCTCGGACGTCTTCAGTGCACACGGCACCTACCTCAAATTTCACCGC
CTCGGCCGATTTTGTGGACTCCACGAGGCTGTATATTATCCGTAACTTCG
GGTGTGACGGCGGGGGGGGGGGGTTCGTTCGGTCCAAAACTCTGTTTCGC
GTGCAGCCACGTTGGGGGCGCATCTCGTGCAATGATCAAACTCGGACGCA
GGCCCTAGTCAAAGCGTAAACGCACTCACCACGTGAAGCTGTAGCAGGCA
CGATCAGAGAGAGTATCACGCGCAGCTTCCAGTTATAAGTTTCGACGAAG
TCTTCGATCTCACAGCTGAGTGAGAAGTGTATGTGTTATTCTCACTGAAA
AGAAATGACGAGCCCCCGCGAAACTGTTTCGCGCAGGAGGGGTCCGTCTT
CGAACAATCAAACTGGGAACGGATGGACGCATGAAGAGAGCGTCAGCGCG
GGGATTCAAGAGGAGGGAAGGGGGGGGGGGGGGGAGCAAGAAGCTGGGGC
CGAGGCCGCGCTCGCTCAAGGAATCGCCTCAAGCTTGAGG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig11331:1959..9948+

>mRNA_M-pyrifera_M_contig11331.2781.1 ID=mRNA_M-pyrifera_M_contig11331.2781.1|Name=mRNA_M-pyrifera_M_contig11331.2781.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2496bp|location=Sequence derived from alignment at M-pyrifera_M_contig11331:1959..9948+ (Macrocystis pyrifera P11B4 male)
ATGCTGTCGAAACCCGCAGATCTATCAGCTCTGGTAGCCTTAAGCCAGAG
CAAACCCAAGATGCTGTCGAAACCCGCAGATCTATCAGCTCTGGTAGCCT
TAAGCCAGAGCAAACCCAAGGACTTTTTCGTGGACAATACGCTGCACGTC
CTGGTGAGCAAGCTTCTCAACTGCCAAAACGAGCAGGTGTCCGACAAAGA
CACCAAGCTAGACGTTTTCGCCATCCTGGCCAATCTCGACTTTTTCGTGG
ACAATACGCTGCACGTCCTGGTGAGCAAGCTTCTCAACTGCCAAAACGAG
CAGGTGTCCGACAAAGACACCAAGCTAGACGTTTTCGCCATCCTGGCCAA
TCTCTCTGGCTCGGGGGATGCCCGCACGAAGCAAGAAGTCCGGACTGCCT
TACAGGGTGTAAGCGAGTGGTTCGATGATTACCTAGGGGGGGAGCAAGGA
GACGGCCTGGAACAGTCTGGCTCGGGGGATGCCCGCACGAAGCAAGAAGT
CCGGACTGCCTTACAGGGTGTAAGCGAGTGGTTCGATGATTACCTAGGGG
GGGAGCAAGGAGACGGCCTGGAACAGGAACCAGAGCTGCACAAGTCGATG
CTTCTACTACTGGCTAGGGCTTGGAGCTACAAGGAACCAGAGCTGCACAA
GTCGATGCTTCTACTACTGGCTAGGGCTTGGAGCTACAAGCTCAAGACTG
AGGATCTGCTGGAACTGACCCGTGGCGATAGGGGTCTCGCTCTAGATTCG
CTCAAGACTGAGGATCTGCTGGAACTGACCCGTGGCGATAGGGGTCTCGC
TCTAGATTCGGTGGTGGGAGTCCTCGAAGACGGAAAGACCTACGCGACCG
AGCTCGTCCAAAGCCGTAAGCCGAGAGAGGGGGCCGTGGCGCAGTGGGAG
CACGAGCTGGTGGTGGGAGTCCTCGAAGACGGAAAGACCTACGCGACCGA
GCTCGTCCAAAGCCGTAAGCCGAGAGAGGGGGCCGTGGCGCAGTGGGAGC
ACGAGCTGGTTTGCCGTCAGCACGAAAAACCTTTGGTTCTTCAGCTGTGC
CGTCTGGTGCGGGGCTTCACACACCCGGCCTCTTACTTCGCGGGGGAGGG
TGACGCCTGCAAAAGTAGTCGTGGTGGTGGGGTGGTCACCGGGGAAGATT
TGGCCCTGTTCTCGGTGGACGAATTCAGTACCGAAATGGTTTGCCGTCAG
CACGAAAAACCTTTGGTTCTTCAGCTGTGCCGTCTGGTGCGGGGCTTCAC
ACACCCGGCCTCTTACTTCGCGGGGGAGGGTGACGCCTGCAAAAGTAGTC
GTGGTGGTGGGGTGGTCACCGGGGAAGATTTGGCCCTGTTCTCGGTGGAC
GAATTCAGTACCGAAATGGATAGCTTGTTGGAAATAACCCTGCGCTCGAG
AGTGATCGAGAAGCTGTCCGTGGCCCTCAACGTGTGCCTGTTTTCTCCGC
AAGGCGAGAGGGAGCAGCATCCCGAACTTTTCCAGGATGAGGTAAGAGGG
GAGGCAAGATAGCTTGTTGGAAATAACCCTGCGCTCGAGAGTGATCGAGA
AGCTGTCCGTGGCCCTCAACGTGTGCCTGTTTTCTCCGCAAGGCGAGAGG
GAGCAGCATCCCGAACTTTTCCAGGATGAGGTAAGAGGGGAGGCAAGCGT
CGAGGGTGGCAGCAGACGCCCTAACAGCGGCGCGCCCGATGATATTGGCG
TCAGTGGCGGATACGACGAGTGCCGGGCGCCTCTGGAGGATAGCGACCAC
CTCGCCGTGCACTGTGTGCACATCTTCATGCAGAACTTGTATCACTACGC
CACTCAGAACACGGCGTCGAGGGTGGCAGCAGACGCCCTAACAGCGGCGC
GCCCGATGATATTGGCGTCAGTGGCGGATACGACGAGTGCCGGGCGCCTC
TGGAGGATAGCGACCACCTCGCCGTGCACTGTGTGCACATCTTCATGCAG
AACTTGTATCACTACGCCACTCAGAACACGGATTTTTACCGGCAACACAT
GCTGAGCGATACATTGCTCGTGCCTAGGCTAATCCTACCATACCTGGACC
AGTGCGTGCGGCAGGCACGACTTCTGTGCCACAGGATTTTTACCGGCAAC
ACATGCTGAGCGATACATTGCTCGTGCCTAGGCTAATCCTACCATACCTG
GACCAGTGCGTGCGGCAGGCACGACTTCTGTGCCACAGGAGGGGTCCGTC
TTCGAACAATCAAACTGGGAACGGATGGACGCATGAAGAGAGCGTCAGCG
CGGGGATTCAAGAGGAGGGAAGGGGGGGGGGGGGGGAGCAAGAAGCTGGG
GCCGAGGCCGCGCTCGCTCAAGGAATCGCCTCAAGCTTGAGGGAGGGGTC
CGTCTTCGAACAATCAAACTGGGAACGGATGGACGCATGAAGAGAGCGTC
AGCGCGGGGATTCAAGAGGAGGGAAGGGGGGGGGGGGGGGAGCAAGAAGC
TGGGGCCGAGGCCGCGCTCGCTCAAGGAATCGCCTCAAGCTTGAGG
back to top