mRNA_M-pyrifera_M_contig113198.2750.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig113198.2750.1 vs. uniprot
Match: UPI00069A9FBA (response regulator n=1 Tax=Desulfonatronum thioautotrophicum TaxID=617001 RepID=UPI00069A9FBA) HSP 1 Score: 108 bits (271), Expect = 4.990e-26 Identity = 63/130 (48.46%), Postives = 81/130 (62.31%), Query Frame = 1
Query: 1 IVIIEDDEVDTEAARRLLARADIGALEVDSYTRLGDAREQLARGEVDVILLDLGLPDVYGLEAVETAHRFAPATPIIVLSGNDDEELAVASLRCGAQDYILKASLDLDTLRRAVRLALARADSERSLRRS 390
++++EDD D R L IG+ E T LG+ARE + + DV+LLDL LPD GLE V A P++VL+G DDEELA+ L GAQDY++K D D L RA+R ALARA +ER+LRRS
Sbjct: 11 VLLVEDDPGDAGLIRNALKDKRIGSFEETWVTSLGEAREIMDAVQFDVVLLDLSLPDSQGLETVRGGLEAARDMPVVVLTGRDDEELALRILEMGAQDYLVKGRHDADALLRALRHALARARTERALRRS 140
BLAST of mRNA_M-pyrifera_M_contig113198.2750.1 vs. uniprot
Match: A0A7C3T8C5_9BACT (PAS domain S-box protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7C3T8C5_9BACT) HSP 1 Score: 111 bits (278), Expect = 8.390e-26 Identity = 51/128 (39.84%), Postives = 88/128 (68.75%), Query Frame = 1
Query: 1 IVIIEDDEVDTEAARRLLARADIGALEVDSYTRLGDAREQLARGEVDVILLDLGLPDVYGLEAVETAHRFAPATPIIVLSGNDDEELAVASLRCGAQDYILKASLDLDTLRRAVRLALARADSERSLR 384
I+IIEDD +D ++ +RL+AR+ + +V+S + DAR+ LA+G+ D++L DLGLPD +G++ ++ AP P+++LSG DDE A+ +++ G QDY++K +D L R+++ A+ R +ER +R
Sbjct: 14 ILIIEDDLIDRKSLQRLIARSSLADAQVESVGSIKDARDVLAKGQYDIVLSDLGLPDSHGMDTIKALRTLAPELPLVILSGLDDEATAILAVQQGVQDYLIKGQVDSQLLVRSIKYAIERKKAERQMR 141
BLAST of mRNA_M-pyrifera_M_contig113198.2750.1 vs. uniprot
Match: A0A2V8S939_9BACT (GGDEF domain-containing response regulator n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8S939_9BACT) HSP 1 Score: 107 bits (268), Expect = 1.490e-24 Identity = 56/127 (44.09%), Postives = 79/127 (62.20%), Query Frame = 1
Query: 1 IVIIEDDEVDTEAARRLLARADIGALEVDSYTRLGDAREQLARGEVDVILLDLGLPDVYGLEAVETAHRFAPATPIIVLSGNDDEELAVASLRCGAQDYILKASLDLDTLRRAVRLALARADSERSL 381
++++ED+ D R LL A E+ TRL +A L + D +LLDLGLPD YGLEAV+ APA PI+VLSG+ DE LAV +++CGAQDY++K + L R++R A+ R E+S+
Sbjct: 4 LLLVEDNPGDARMVRELLQEAGSAPFEITHVTRLSEAVRCLGQDGFDAVLLDLGLPDAYGLEAVDPIKNAAPAIPIVVLSGHQDERLAVQAVQCGAQDYLIKGRESGELLARSIRYAIERKRMEQSM 130
BLAST of mRNA_M-pyrifera_M_contig113198.2750.1 vs. uniprot
Match: A0A351CF86_9DELT (Uncharacterized protein n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A351CF86_9DELT) HSP 1 Score: 103 bits (257), Expect = 3.490e-24 Identity = 58/141 (41.13%), Postives = 86/141 (60.99%), Query Frame = 1
Query: 1 IVIIEDDEVDTEAARRLLARADIGALEVDSYTRLGDAREQLARGEVDVILLDLGLPDVYGLEAVETAHRFAPATPIIVLSGNDDEELAVASLRCGAQDYILKASLDLDTLRRAVRLALARADSERSLRRSVLKLLVRSDDL 423
I++IED+ D R LL+ + ++++ RL D R L E DV+LLDL LPD G+E + + AP ++VL+G DDEE A+ SLR GAQDY++K +D D L R +R +L R +E++L +S KL ++ DL
Sbjct: 7 ILLIEDNPGDIRLIRELLSESQRSSVDITVSERLSDGRSALVNQEFDVVLLDLTLPDSQGIETLRKVYPDAPHAAVVVLTGLDDEETALTSLREGAQDYLVKDRMDPDALWRTIRYSLERKQAEQALVQSERKLKAKTADL 147
BLAST of mRNA_M-pyrifera_M_contig113198.2750.1 vs. uniprot
Match: A0A2V9DQ63_9BACT (Hybrid sensor histidine kinase/response regulator (Fragment) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9DQ63_9BACT) HSP 1 Score: 100 bits (250), Expect = 8.510e-24 Identity = 51/120 (42.50%), Postives = 75/120 (62.50%), Query Frame = 1
Query: 1 IVIIEDDEVDTEAARRLLARADIGALEVDSYTRLGDAREQLARGEVDVILLDLGLPDVYGLEAVETAHRFAPATPIIVLSGNDDEELAVASLRCGAQDYILKASLDLDTLRRAVRLALAR 360
++++ED+ D R + + G+ E+ R+ +A LA+G VD+ LLDLGLPD GLE V AH AP P+IVL+G DDE LA +++ GAQDY++K ++ L RA+R A+ R
Sbjct: 8 VLLVEDNAGDARLLREMFSTERAGSFELTHLLRMSEAVAHLAKGGVDIALLDLGLPDAQGLETVRRAHAVAPDVPVIVLTGLDDEALAAEAMKEGAQDYLIKGQIENRALPRALRHAIER 127
BLAST of mRNA_M-pyrifera_M_contig113198.2750.1 vs. uniprot
Match: A0A533BK49_9BACT (Uncharacterized protein n=1 Tax=Nitrospira sp. TaxID=70125 RepID=A0A533BK49_9BACT) HSP 1 Score: 105 bits (262), Expect = 8.640e-24 Identity = 60/135 (44.44%), Postives = 88/135 (65.19%), Query Frame = 1
Query: 1 IVIIEDDEVDTEAARRLLA-RADIGALEVDSYTRLGDAREQLARGEVDVILLDLGLPDVYGLEAVETAHRFAPATPIIVLSGNDDEELAVASLRCGAQDYILKASLDLDTLRRAVRLALARADSERSLRRSVLKL 402
+++IED+E D R +LA + D+G +E++ RL +L G++D++LLDL LPD +GLE +T R AP PI+VL+G DDE +A ++R GAQDY++K LD L RA R A+ R +ER+LR S +L
Sbjct: 3 VLLIEDNEDDAILIREMLAEKKDLG-IELEWVDRLSRGLTELGSGKIDLVLLDLSLPDSHGLETFDTVQRCAPDVPIVVLTGLDDEAMANQAVRRGAQDYLVKGRLDSYLLTRAARYAVERKQAERALRESEAQL 136
BLAST of mRNA_M-pyrifera_M_contig113198.2750.1 vs. uniprot
Match: D6Z2H1_DESAT (Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) TaxID=589865 RepID=D6Z2H1_DESAT) HSP 1 Score: 105 bits (262), Expect = 1.050e-23 Identity = 60/134 (44.78%), Postives = 84/134 (62.69%), Query Frame = 1
Query: 1 IVIIEDDEVDTEAARRLLARADIGALEVDSYTRLGDAREQLARGEVDVILLDLGLPDVYGLEAVETAHRFAPATPIIVLSGNDDEELAVASLRCGAQDYILKASLDLDTLRRAVRLALARADSERSLRRSVLKL 402
++++ED+ D +R L A G V++ L + R+ +A + DV+LLDL LPD GLE VE+ R AP TPI+VL+G+DDEELA A+L GAQDY+ K +L +L RA+R A+ RA E L S +L
Sbjct: 14 VLVVEDEPGDALLVQRTLLGAGSGRYAVETAASLAETRQIIAGRQPDVLLLDLALPDSTGLETVESVRRQAPQTPIVVLTGHDDEELAQAALEAGAQDYLTKNTLGSYSLSRAIRYAVTRARLENRLLESNRRL 147
BLAST of mRNA_M-pyrifera_M_contig113198.2750.1 vs. uniprot
Match: UPI00069C1F65 (PAS domain-containing protein n=1 Tax=Desulfonatronum thioautotrophicum TaxID=617001 RepID=UPI00069C1F65) HSP 1 Score: 103 bits (256), Expect = 7.070e-23 Identity = 61/130 (46.92%), Postives = 79/130 (60.77%), Query Frame = 1
Query: 1 IVIIEDDEVDTEAARRLLARADIGALEVDSYTRLGDAREQLARGEVDVILLDLGLPDVYGLEAVETAHRFAPATPIIVLSGNDDEELAVASLRCGAQDYILKASLDLDTLRRAVRLALARADSERSLRRS 390
++++EDD D R L G E T LG+ARE+L+ D +LLDL LPD GLE V A P++VL+G +DEELA+ L GAQDY++K D D L RA+R ALARA +ER+LRRS
Sbjct: 11 LLLVEDDPGDAGLIRHALRDDRFGRFEATWVTTLGEARERLSARHFDAVLLDLTLPDSQGLETVLGGLEAARDVPVVVLTGWNDEELALRILEMGAQDYLVKGRHDTDALLRALRHALARARTERALRRS 140
BLAST of mRNA_M-pyrifera_M_contig113198.2750.1 vs. uniprot
Match: C6HW18_9BACT (Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptospirillum ferrodiazotrophum TaxID=412449 RepID=C6HW18_9BACT) HSP 1 Score: 103 bits (256), Expect = 7.440e-23 Identity = 56/124 (45.16%), Postives = 79/124 (63.71%), Query Frame = 1
Query: 1 IVIIEDDEVDTEAARRLLARADIGALEVDSYTRLGDAREQLARGEVDVILLDLGLPDVYGLEAVETAHRFAPATPIIVLSGNDDEELAVASLRCGAQDYILKASLDLDTLRRAVRLALARADSE 372
I+ +ED+ D R +L AD +E+ +R+G+ R +LA+G +DVILLDL LPD GL AVE H P P++VLS DEELAVASL+ GAQD+++K ++ L R++ A+ R D E
Sbjct: 8 ILFVEDNPGDIRLVREMLIAADEERIELSFVSRVGEVRTRLAQGGIDVILLDLNLPDANGLSAVEHIHADFPEIPLVVLSSVIDEELAVASLQAGAQDFLVKGMINGPLLTRSIFYAIKRKDLE 131
BLAST of mRNA_M-pyrifera_M_contig113198.2750.1 vs. uniprot
Match: A0A517Z600_9PLAN (Phosphoserine phosphatase RsbU n=1 Tax=Maioricimonas rarisocia TaxID=2528026 RepID=A0A517Z600_9PLAN) HSP 1 Score: 101 bits (251), Expect = 1.190e-22 Identity = 57/121 (47.11%), Postives = 75/121 (61.98%), Query Frame = 1
Query: 1 IVIIEDDEVDTEAARRLLARADIGALEVDSYTRLGDAREQLARGEVDVILLDLGLPDVYGLEAVETAHRFAPATPIIVLSGNDDEELAVASLRCGAQDYILKASLDLDTLRRAVRLALARA 363
I+++ED++ D E RR L R E+ L AR +A G D+I+LDL LPD GLE H A TPI+VLSG DDEE+A ++ GAQDY++K+SLD + L RA+R AL RA
Sbjct: 9 ILLVEDEQTDAELIRRTLQRRFSIPFELIHAPDLATARTLVAAGAPDLIVLDLSLPDSSGLETFRNLHAAAADTPIVVLSGYDDEEIAADAVGLGAQDYLVKSSLDANVLTRALRFALERA 129 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113198.2750.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig113198.2750.1 >prot_M-pyrifera_M_contig113198.2750.1 ID=prot_M-pyrifera_M_contig113198.2750.1|Name=mRNA_M-pyrifera_M_contig113198.2750.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=141bp IVIIEDDEVDTEAARRLLARADIGALEVDSYTRLGDAREQLARGEVDVILback to top mRNA from alignment at M-pyrifera_M_contig113198:37..459- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig113198.2750.1 ID=mRNA_M-pyrifera_M_contig113198.2750.1|Name=mRNA_M-pyrifera_M_contig113198.2750.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=423bp|location=Sequence derived from alignment at M-pyrifera_M_contig113198:37..459- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig113198:37..459- >mRNA_M-pyrifera_M_contig113198.2750.1 ID=mRNA_M-pyrifera_M_contig113198.2750.1|Name=mRNA_M-pyrifera_M_contig113198.2750.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=846bp|location=Sequence derived from alignment at M-pyrifera_M_contig113198:37..459- (Macrocystis pyrifera P11B4 male)back to top |