mRNA_M-pyrifera_M_contig113035.2705.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig113035.2705.1 vs. uniprot
Match: A0A0L1JLB7_9RHOB (ABC transporter permease n=1 Tax=Pseudaestuariivita atlantica TaxID=1317121 RepID=A0A0L1JLB7_9RHOB) HSP 1 Score: 296 bits (759), Expect = 1.380e-98 Identity = 156/175 (89.14%), Postives = 168/175 (96.00%), Query Frame = 1
Query: 1 FLIGILLIYLFSVELDLLPSFGRGDVVKIGGWSTGFLTVSGLKALILPAITLGLYQMTLIMRLVRSEMLEVLRQDYIRFARARGLSQRAVYFHHALKNTLVPVITITGLQLGSIIAFAIVTETVFQWPGIGLLFVNAIQFVDIPVMAAYLMLISVVFVAINLIVDLLYFAVDPRL 525
FLIGILLIY+FSVELDLLPSFGRGD V +G WSTGFLT SGLKALILP+ITLGLYQMTLIMRLVR+EMLEVLRQDYIRFARARGL RA++F HALKNTLVPVIT+TGLQLGSIIAFAI+TETVFQWPG+GLLF+NAIQFVDIPVMAAYLMLISV+FVAINLIVDLLYFA+DPRL
Sbjct: 144 FLIGILLIYVFSVELDLLPSFGRGDTVNLGWWSTGFLTWSGLKALILPSITLGLYQMTLIMRLVRTEMLEVLRQDYIRFARARGLRDRAIHFRHALKNTLVPVITVTGLQLGSIIAFAIITETVFQWPGVGLLFINAIQFVDIPVMAAYLMLISVMFVAINLIVDLLYFAIDPRL 318
BLAST of mRNA_M-pyrifera_M_contig113035.2705.1 vs. uniprot
Match: UPI000D34A4E2 (ABC transporter permease n=1 Tax=Oceaniglobus ichthyenteri TaxID=2136177 RepID=UPI000D34A4E2) HSP 1 Score: 296 bits (759), Expect = 1.570e-98 Identity = 157/175 (89.71%), Postives = 167/175 (95.43%), Query Frame = 1
Query: 1 FLIGILLIYLFSVELDLLPSFGRGDVVKIGGWSTGFLTVSGLKALILPAITLGLYQMTLIMRLVRSEMLEVLRQDYIRFARARGLSQRAVYFHHALKNTLVPVITITGLQLGSIIAFAIVTETVFQWPGIGLLFVNAIQFVDIPVMAAYLMLISVVFVAINLIVDLLYFAVDPRL 525
FLIGILLIYLFSVELDLLPSFGRGD V +GGWSTGFLT SGL ALILP+ITLGLYQMTLIMRLVRSEMLEVLRQDYIRFARARGL +R V F HALKNTLVPVIT+TGLQ+GSIIAFAI+TETVFQWPG+GLLF+NAIQFVDIPVMAAYLMLISV+FVAINLIVDLLYFA+DPRL
Sbjct: 144 FLIGILLIYLFSVELDLLPSFGRGDTVMVGGWSTGFLTKSGLLALILPSITLGLYQMTLIMRLVRSEMLEVLRQDYIRFARARGLPERVVNFRHALKNTLVPVITVTGLQVGSIIAFAIITETVFQWPGVGLLFINAIQFVDIPVMAAYLMLISVMFVAINLIVDLLYFAIDPRL 318
BLAST of mRNA_M-pyrifera_M_contig113035.2705.1 vs. uniprot
Match: A8LRH6_DINSH (Binding-protein-dependent transport systems inner membrane component n=1 Tax=Dinoroseobacter shibae (strain DSM 16493 / NCIMB 14021 / DFL 12) TaxID=398580 RepID=A8LRH6_DINSH) HSP 1 Score: 296 bits (759), Expect = 1.790e-98 Identity = 155/184 (84.24%), Postives = 173/184 (94.02%), Query Frame = 1
Query: 1 FLIGILLIYLFSVELDLLPSFGRGDVVKIGGWSTGFLTVSGLKALILPAITLGLYQMTLIMRLVRSEMLEVLRQDYIRFARARGLSQRAVYFHHALKNTLVPVITITGLQLGSIIAFAIVTETVFQWPGIGLLFVNAIQFVDIPVMAAYLMLISVVFVAINLIVDLLYFAVDPRLGGEDAVAGN 552
FLIGILLIY+F+VEL+ LPSFGRG+VV +GGW+TGFLT SGLKALILPAITLGLYQMTLIMRLVRSEMLEVLRQDYIRFARARGL+++AV F HALKNTLVPVIT+TGLQLGSIIAFAI+TETVFQWPG+GLLF+NAIQFVDIPVMAAYLMLISV+FV INL+VDLLYFA+DPRL + + AG
Sbjct: 144 FLIGILLIYVFAVELNWLPSFGRGEVVDLGGWTTGFLTASGLKALILPAITLGLYQMTLIMRLVRSEMLEVLRQDYIRFARARGLTEKAVNFRHALKNTLVPVITVTGLQLGSIIAFAIITETVFQWPGVGLLFINAIQFVDIPVMAAYLMLISVMFVGINLVVDLLYFAIDPRLRVDRSAAGG 327
BLAST of mRNA_M-pyrifera_M_contig113035.2705.1 vs. uniprot
Match: UPI0010A9B82B (ABC transporter permease n=1 Tax=Nitratireductor sp. XY-223 TaxID=2561926 RepID=UPI0010A9B82B) HSP 1 Score: 296 bits (759), Expect = 1.790e-98 Identity = 158/184 (85.87%), Postives = 169/184 (91.85%), Query Frame = 1
Query: 1 FLIGILLIYLFSVELDLLPSFGRGDVVKIGGWSTGFLTVSGLKALILPAITLGLYQMTLIMRLVRSEMLEVLRQDYIRFARARGLSQRAVYFHHALKNTLVPVITITGLQLGSIIAFAIVTETVFQWPGIGLLFVNAIQFVDIPVMAAYLMLISVVFVAINLIVDLLYFAVDPRLGGEDAVAGN 552
FLIGILLIY+FSVEL LPSFGRG+ VK+G W+TGFLT SGLKALILPAITLGLYQMTLIMRLVRSEMLEVLRQDYIRFARARGLS R V+F HALKNTLVPVIT+TGLQLGSIIAFAI+TETVFQWPGIGLLF+NAIQFVDIPVMAAYL+LISV+FVAIN IVDLLYFAVDPRL + AG
Sbjct: 144 FLIGILLIYIFSVELGWLPSFGRGETVKVGDWTTGFLTESGLKALILPAITLGLYQMTLIMRLVRSEMLEVLRQDYIRFARARGLSDRIVHFRHALKNTLVPVITVTGLQLGSIIAFAIITETVFQWPGIGLLFINAIQFVDIPVMAAYLLLISVMFVAINFIVDLLYFAVDPRLRDDAVTAGE 327
BLAST of mRNA_M-pyrifera_M_contig113035.2705.1 vs. uniprot
Match: A0A0A0EI11_9RHOB (ABC transporter permease n=13 Tax=Rhodobacterales TaxID=204455 RepID=A0A0A0EI11_9RHOB) HSP 1 Score: 296 bits (757), Expect = 3.600e-98 Identity = 154/184 (83.70%), Postives = 171/184 (92.93%), Query Frame = 1
Query: 1 FLIGILLIYLFSVELDLLPSFGRGDVVKIGGWSTGFLTVSGLKALILPAITLGLYQMTLIMRLVRSEMLEVLRQDYIRFARARGLSQRAVYFHHALKNTLVPVITITGLQLGSIIAFAIVTETVFQWPGIGLLFVNAIQFVDIPVMAAYLMLISVVFVAINLIVDLLYFAVDPRLGGEDAVAGN 552
FLIGILLIYLFSVEL LPSFGRG+V ++GGW+TGFLT SGLKALILPAITLGLYQMTLIMRLVR+EMLEVLR DYIRFARARG+ +RA+ FHHALKNTLVPVITITGLQLGSIIAFAI+TETVFQWPG+GLLF+NA+QFVDIPVMAAYLM+ISV+FV INLIVDLLYFA+DPRL + + AG
Sbjct: 144 FLIGILLIYLFSVELGWLPSFGRGEVTRLGGWTTGFLTESGLKALILPAITLGLYQMTLIMRLVRTEMLEVLRMDYIRFARARGIRERAINFHHALKNTLVPVITITGLQLGSIIAFAIITETVFQWPGVGLLFINAVQFVDIPVMAAYLMMISVMFVGINLIVDLLYFAIDPRLRVDRSAAGG 327
BLAST of mRNA_M-pyrifera_M_contig113035.2705.1 vs. uniprot
Match: A0A4V0Z9B0_9RHOB (ABC transporter permease n=3 Tax=Rhodobacterales TaxID=204455 RepID=A0A4V0Z9B0_9RHOB) HSP 1 Score: 295 bits (756), Expect = 4.630e-98 Identity = 157/175 (89.71%), Postives = 167/175 (95.43%), Query Frame = 1
Query: 1 FLIGILLIYLFSVELDLLPSFGRGDVVKIGGWSTGFLTVSGLKALILPAITLGLYQMTLIMRLVRSEMLEVLRQDYIRFARARGLSQRAVYFHHALKNTLVPVITITGLQLGSIIAFAIVTETVFQWPGIGLLFVNAIQFVDIPVMAAYLMLISVVFVAINLIVDLLYFAVDPRL 525
FLIGILLIY+FSVELD LPSFGRG+ V IGGWSTGFLT SGL ALILPAITLGLYQMTLIMRLVRSEMLEVLRQDYIRFARARGL +RAV F HA+KNTLVPVIT+TGLQLGSIIAFAI+TETVFQWPG+GLLF+NAIQFVDIPVMAAYLMLISV+FVAINLIVDLLYFA+DPRL
Sbjct: 144 FLIGILLIYVFSVELDWLPSFGRGETVMIGGWSTGFLTQSGLMALILPAITLGLYQMTLIMRLVRSEMLEVLRQDYIRFARARGLRERAVNFRHAMKNTLVPVITVTGLQLGSIIAFAIITETVFQWPGVGLLFINAIQFVDIPVMAAYLMLISVMFVAINLIVDLLYFAIDPRL 318
BLAST of mRNA_M-pyrifera_M_contig113035.2705.1 vs. uniprot
Match: A0A5P9FCG3_9RHOB (Glutathione transport system permease protein GsiC n=8 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A5P9FCG3_9RHOB) HSP 1 Score: 295 bits (756), Expect = 4.790e-98 Identity = 155/178 (87.08%), Postives = 168/178 (94.38%), Query Frame = 1
Query: 1 FLIGILLIYLFSVELDLLPSFGRGDVVKIGGWSTGFLTVSGLKALILPAITLGLYQMTLIMRLVRSEMLEVLRQDYIRFARARGLSQRAVYFHHALKNTLVPVITITGLQLGSIIAFAIVTETVFQWPGIGLLFVNAIQFVDIPVMAAYLMLISVVFVAINLIVDLLYFAVDPRLGGE 534
FLIGILLIYLFSVEL LPSFGRGD V++GGWSTGFLT SGLKALILP+ITLGLYQMTLIMRLVRSEMLEVLRQDYIRFARARGL +RAV F HALKNTLVPVIT+TGLQLGSIIAFAI+TETVFQWPG+GLLF+NAIQFVDIPVMAAYLMLISV+FV INL+VDLLYF++DPRL +
Sbjct: 144 FLIGILLIYLFSVELGWLPSFGRGDTVRVGGWSTGFLTESGLKALILPSITLGLYQMTLIMRLVRSEMLEVLRQDYIRFARARGLRERAVNFRHALKNTLVPVITVTGLQLGSIIAFAIITETVFQWPGVGLLFINAIQFVDIPVMAAYLMLISVMFVGINLVVDLLYFSIDPRLRAD 321
BLAST of mRNA_M-pyrifera_M_contig113035.2705.1 vs. uniprot
Match: A0A369QUS7_9RHOB (ABC transporter permease n=1 Tax=Rhodovulum sp. 12E13 TaxID=2203891 RepID=A0A369QUS7_9RHOB) HSP 1 Score: 295 bits (756), Expect = 4.790e-98 Identity = 157/175 (89.71%), Postives = 167/175 (95.43%), Query Frame = 1
Query: 1 FLIGILLIYLFSVELDLLPSFGRGDVVKIGGWSTGFLTVSGLKALILPAITLGLYQMTLIMRLVRSEMLEVLRQDYIRFARARGLSQRAVYFHHALKNTLVPVITITGLQLGSIIAFAIVTETVFQWPGIGLLFVNAIQFVDIPVMAAYLMLISVVFVAINLIVDLLYFAVDPRL 525
FLIGILLIYLFSVELD+LPSFGRGDVV +G W+TG LT SGLKALILPAITLGLYQMTLIMRLVRSEMLEVLRQDYIRFARARGL +RAV F HALKNTLVPVIT+TGLQLGSIIAFAI+TETVFQWPG+GLLF+NAIQFVDIPVMAAYLMLISV+FV INLIVDLLYFA+DPRL
Sbjct: 144 FLIGILLIYLFSVELDMLPSFGRGDVVDLGWWTTGLLTESGLKALILPAITLGLYQMTLIMRLVRSEMLEVLRQDYIRFARARGLRERAVNFRHALKNTLVPVITVTGLQLGSIIAFAIITETVFQWPGVGLLFINAIQFVDIPVMAAYLMLISVMFVGINLIVDLLYFAIDPRL 318
BLAST of mRNA_M-pyrifera_M_contig113035.2705.1 vs. uniprot
Match: UPI00186730DE (ABC transporter permease n=1 Tax=Fluviibacterium sp. MJW13 TaxID=2720031 RepID=UPI00186730DE) HSP 1 Score: 295 bits (756), Expect = 4.950e-98 Identity = 157/184 (85.33%), Postives = 169/184 (91.85%), Query Frame = 1
Query: 1 FLIGILLIYLFSVELDLLPSFGRGDVVKIGGWSTGFLTVSGLKALILPAITLGLYQMTLIMRLVRSEMLEVLRQDYIRFARARGLSQRAVYFHHALKNTLVPVITITGLQLGSIIAFAIVTETVFQWPGIGLLFVNAIQFVDIPVMAAYLMLISVVFVAINLIVDLLYFAVDPRLGGEDAVAGN 552
FLIGILLIYLFSVEL LPSFGRGD V IGGWSTGFLT SGLKALILP+ITLGLYQMTLIMRLVRSEMLEVLRQDYIRFARARGL +R+V F HALKNTLVPVIT+TGLQLGSIIAFAI+TETVFQWPG+GLLF+NAIQFVDIPVMAAYLMLISV+FV INLIVDLLY A+DPRL + + G+
Sbjct: 144 FLIGILLIYLFSVELGWLPSFGRGDTVMIGGWSTGFLTTSGLKALILPSITLGLYQMTLIMRLVRSEMLEVLRQDYIRFARARGLRERSVNFRHALKNTLVPVITVTGLQLGSIIAFAIITETVFQWPGVGLLFINAIQFVDIPVMAAYLMLISVMFVGINLIVDLLYVAIDPRLRSDSSKRGH 327
BLAST of mRNA_M-pyrifera_M_contig113035.2705.1 vs. uniprot
Match: A0A6L8G8D0_9RHOB (ABC transporter permease n=5 Tax=unclassified Boseongicola TaxID=2634418 RepID=A0A6L8G8D0_9RHOB) HSP 1 Score: 295 bits (755), Expect = 6.570e-98 Identity = 154/178 (86.52%), Postives = 167/178 (93.82%), Query Frame = 1
Query: 1 FLIGILLIYLFSVELDLLPSFGRGDVVKIGGWSTGFLTVSGLKALILPAITLGLYQMTLIMRLVRSEMLEVLRQDYIRFARARGLSQRAVYFHHALKNTLVPVITITGLQLGSIIAFAIVTETVFQWPGIGLLFVNAIQFVDIPVMAAYLMLISVVFVAINLIVDLLYFAVDPRLGGE 534
FLIGILLIY+FSVELDLLPSFGRGDVV +GGWSTG LT SGLKAL+LP+ITLGLYQMTLIMRLVR+EMLEVLRQDYI FARARGLS+R V F HALKNTLVPVIT+TGLQLGSIIAFAI+TETVFQWPG+GLLF+NAIQFVDIPVMAAYLMLISV+FV INL+VDLLY A+DPRL G
Sbjct: 144 FLIGILLIYVFSVELDLLPSFGRGDVVDVGGWSTGLLTASGLKALVLPSITLGLYQMTLIMRLVRAEMLEVLRQDYINFARARGLSERVVNFRHALKNTLVPVITVTGLQLGSIIAFAIITETVFQWPGVGLLFINAIQFVDIPVMAAYLMLISVMFVGINLVVDLLYVAIDPRLRGN 321 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113035.2705.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig113035.2705.1 >prot_M-pyrifera_M_contig113035.2705.1 ID=prot_M-pyrifera_M_contig113035.2705.1|Name=mRNA_M-pyrifera_M_contig113035.2705.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=186bp FLIGILLIYLFSVELDLLPSFGRGDVVKIGGWSTGFLTVSGLKALILPAIback to top mRNA from alignment at M-pyrifera_M_contig113035:3..560+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig113035.2705.1 ID=mRNA_M-pyrifera_M_contig113035.2705.1|Name=mRNA_M-pyrifera_M_contig113035.2705.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=558bp|location=Sequence derived from alignment at M-pyrifera_M_contig113035:3..560+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig113035:3..560+ >mRNA_M-pyrifera_M_contig113035.2705.1 ID=mRNA_M-pyrifera_M_contig113035.2705.1|Name=mRNA_M-pyrifera_M_contig113035.2705.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1116bp|location=Sequence derived from alignment at M-pyrifera_M_contig113035:3..560+ (Macrocystis pyrifera P11B4 male)back to top |