mRNA_M-pyrifera_M_contig11294.2690.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig11294.2690.1
Unique NamemRNA_M-pyrifera_M_contig11294.2690.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig11294.2690.1 vs. uniprot
Match: A0A6H5KMQ7_9PHAE (PlsC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KMQ7_9PHAE)

HSP 1 Score: 197 bits (502), Expect = 4.250e-61
Identity = 93/139 (66.91%), Postives = 114/139 (82.01%), Query Frame = 1
Query:    1 PFLGGVSRMVGHFPVFFKTNDEHSFVVDKAKQAETMVKVKAYVESGGGLSLFPEGKINRNPETICPFRRGTFSLIEEMDMPVVVLSTVGCSDAWPRENAVGGLPARVLMKLIEVTKAGEGLSAATIQEKAEAIMQESVT 417
            PFLGGV RMVGHFPV F++ DE+SF VDK +QA+ M KVKA+VES G L LFPEGKINRNP  +CPFRRGTF + EEM+M VV L+TVGC ++WPRE+ VGGLPAR++++L E+ +AG GL+AA +QEKAEA MQ  VT
Sbjct:  122 PFLGGVCRMVGHFPVLFRSKDENSFAVDKPEQAKIMEKVKAHVESDGCLCLFPEGKINRNPAVLCPFRRGTFGVAEEMNMAVVSLTTVGCDESWPRESPVGGLPARIVIRLTEIAEAGHGLTAAALQEKAEASMQADVT 260          
BLAST of mRNA_M-pyrifera_M_contig11294.2690.1 vs. uniprot
Match: A0A835Z6S5_9STRA (Acyltransferase-like protein, copy 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6S5_9STRA)

HSP 1 Score: 126 bits (317), Expect = 4.020e-33
Identity = 59/141 (41.84%), Postives = 89/141 (63.12%), Query Frame = 1
Query:    1 PFLGGVSRMVGHFPVFFKTNDEHSFVVDKAKQAETMVKVKAYVESGGGLSLFPEGKINRNPETICPFRRGTFSLIEEMDMPVVVLSTVGCSDAWPRENAVGGLPARVLMKLIEVTKAGEGLSAATIQEKAEAIMQESVTFM 423
            P LGG+S   GHFPV F T  E  F VDK   A  M  V+A+V  GG LS+FPEG++NR+P+T+ PFR  + ++  +  M V  ++ +G +  WPR +A+GG+P  + ++L EV     GL AA ++++A+A MQ+ +  M
Sbjct:  124 PLLGGISACAGHFPVHFLTPREEEFSVDKMIMAGVMELVRAHVARGGCLSIFPEGRVNRSPDTLLPFRNSSLAIAADEGMAVATMTQLGNAACWPRASAMGGVPCAIRVRLTEVAPHAHGLDAAALRDRAQAAMQKDLDAM 264          
BLAST of mRNA_M-pyrifera_M_contig11294.2690.1 vs. uniprot
Match: A0A0N0DSH2_9TRYP (Putative mitochondrial acyltransferase-like protein, copy 2 n=1 Tax=Leptomonas pyrrhocoris TaxID=157538 RepID=A0A0N0DSH2_9TRYP)

HSP 1 Score: 110 bits (275), Expect = 2.670e-26
Identity = 54/140 (38.57%), Postives = 83/140 (59.29%), Query Frame = 1
Query:    1 PFLGGVSRMVGHFPVFFKTNDEHSFVVDKAKQAETMVKVKAYVESGGGLSLFPEGKINRNPETICPFRRGTFSLIEEMDMPVVVLSTVGCSDAWPRENAVGGLPARVLMKL----IEVTKAGEGLSAATIQEKAEAIMQE 408
            P  GG    VGHFPV+FK++++ +F VDK KQA     V  ++  GG + +FPEG +N+NPET+  FR GTF+ I E  MPV  L ++G    WP ++  GG PA + +++    I+  K    + AA +Q++ + +  E
Sbjct:  172 PIFGGCFDRVGHFPVYFKSDEDGNFHVDKEKQAVVATHVAGHLRRGGNIVVFPEGAVNKNPETLQTFRYGTFATIFEHRMPVYYLVSLGNERTWPAQHPYGGAPADIRVRIGAFPIDFDKENSKVVAARLQQRMQQVRDE 311          
BLAST of mRNA_M-pyrifera_M_contig11294.2690.1 vs. uniprot
Match: A0A0N1HTP4_LEPSE (PlsC domain-containing protein n=1 Tax=Leptomonas seymouri TaxID=5684 RepID=A0A0N1HTP4_LEPSE)

HSP 1 Score: 109 bits (272), Expect = 3.310e-26
Identity = 52/104 (50.00%), Postives = 66/104 (63.46%), Query Frame = 1
Query:    1 PFLGGVSRMVGHFPVFFKTNDEHSFVVDKAKQAETMVKVKAYVESGGGLSLFPEGKINRNPETICPFRRGTFSLIEEMDMPVVVLSTVGCSDAWPRENAVGGLP 312
            P  GG+   VG+FPV+FK+++E  F VDK KQA   V V A+V +GG L++FPEG INRNP  +  FR GTF+ I E  M V  L  +G    WPR   VGG+P
Sbjct:  150 PIFGGIFDRVGNFPVYFKSDEEGHFEVDKEKQAAVQVGVDAHVRNGGNLAIFPEGAINRNPRVLLSFRYGTFTTIFEHRMTVYYLVHLGAEKTWPRWTMVGGMP 253          
BLAST of mRNA_M-pyrifera_M_contig11294.2690.1 vs. uniprot
Match: A0A0N0VDN6_9TRYP (Putative mitochondrial acyltransferase n=1 Tax=Leptomonas pyrrhocoris TaxID=157538 RepID=A0A0N0VDN6_9TRYP)

HSP 1 Score: 108 bits (269), Expect = 1.030e-25
Identity = 50/104 (48.08%), Postives = 67/104 (64.42%), Query Frame = 1
Query:    1 PFLGGVSRMVGHFPVFFKTNDEHSFVVDKAKQAETMVKVKAYVESGGGLSLFPEGKINRNPETICPFRRGTFSLIEEMDMPVVVLSTVGCSDAWPRENAVGGLP 312
            P  GG+   VG+FPV+FK++++  F VDK KQA   V V+A++ SGG L++FPEG IN+NP  +  FR GTF+ I E  MPV     +G    WPR   VGG+P
Sbjct:  150 PIFGGIFDRVGNFPVYFKSDEDGHFEVDKEKQAAVQVGVEAHLSSGGSLAIFPEGAINKNPRVLQTFRYGTFATIFEHRMPVYYFVHLGAERTWPRWTMVGGMP 253          
BLAST of mRNA_M-pyrifera_M_contig11294.2690.1 vs. uniprot
Match: A0A0N0P455_LEPSE (Acyltransferase-like protein copy 2 n=1 Tax=Leptomonas seymouri TaxID=5684 RepID=A0A0N0P455_LEPSE)

HSP 1 Score: 107 bits (268), Expect = 2.250e-25
Identity = 48/111 (43.24%), Postives = 72/111 (64.86%), Query Frame = 1
Query:    1 PFLGGVSRMVGHFPVFFKTNDEHSFVVDKAKQAETMVKVKAYVESGGGLSLFPEGKINRNPETICPFRRGTFSLIEEMDMPVVVLSTVGCSDAWPRENAVGGLPARVLMKL 333
            P  GG+   VGHFPV+FK++ + +F VDK KQA  M  V  ++  GG + +FPEG +N++PET+  FR GTF+ I E  MPV  + ++G    WP + A GG+PA + +++
Sbjct:  171 PIFGGMFDRVGHFPVYFKSDGDGNFQVDKEKQAVVMKHVNWHLRQGGSIVVFPEGAVNKHPETLQTFRYGTFATIFEHRMPVYYMVSIGNEKTWPPQEAFGGMPADIRIRI 281          
BLAST of mRNA_M-pyrifera_M_contig11294.2690.1 vs. uniprot
Match: S9W582_9TRYP (Acyltransferase, putative n=1 Tax=Angomonas deanei TaxID=59799 RepID=S9W582_9TRYP)

HSP 1 Score: 107 bits (266), Expect = 3.700e-25
Identity = 48/110 (43.64%), Postives = 70/110 (63.64%), Query Frame = 1
Query:    1 PFLGGVSRMVGHFPVFFKTNDEHSFVVDKAKQAETMVKVKAYVESGGGLSLFPEGKINRNPETICPFRRGTFSLIEEMDMPVVVLSTVGCSDAWPRENAVGGLPARVLMK 330
            P  GG    VGHFPVFFK++++ +F VDK +QA   V V  ++E+GG L++FPEG +N+N   + PFR GTF+ I E  MP+  + +VG    WP +   GG PA + ++
Sbjct:  164 PIFGGCFDRVGHFPVFFKSDEDGNFQVDKERQAAVQVHVNQHIENGGNLAIFPEGAVNKNTAVLKPFRFGTFATIFEHKMPLYYVVSVGNEKTWPPQCVSGGFPADIRVR 273          
BLAST of mRNA_M-pyrifera_M_contig11294.2690.1 vs. uniprot
Match: A0A7S0DPX5_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DPX5_9EUKA)

HSP 1 Score: 105 bits (263), Expect = 4.230e-25
Identity = 50/130 (38.46%), Postives = 77/130 (59.23%), Query Frame = 1
Query:    7 LGGVSRMVGHFPVFFKTNDEHSFVVDKAKQAETMVKVKAYVESGGGLSLFPEGKINRNPETICPFRRGTFSLIEEMDMPVVVLSTVGCSDAWPRENAVGGLPARVLMKLIEVTKAGEGLSAATIQEKAEA 396
            +G + ++VGH PV+FK+ND  +F VDK KQA    K++ ++ +G  L   PEG+IN +P T+ PFRRG+F +  EM M +  L+T  C   WP+   +GG PA + + L ++         A++ E  EA
Sbjct:  126 VGRLWKLVGHLPVYFKSNDHGAFKVDKEKQAVVSKKLRGFMATGKILIFCPEGQINNDPRTLQPFRRGSFDMPSEMGMDIWALTTANCDKVWPKLAPMGGYPATIKISLKKIHSGNPRKKNASLDEVKEA 255          
BLAST of mRNA_M-pyrifera_M_contig11294.2690.1 vs. uniprot
Match: A0A836H9Y0_9TRYP (PlsC domain-containing protein n=1 Tax=Leishmania martiniquensis TaxID=1580590 RepID=A0A836H9Y0_9TRYP)

HSP 1 Score: 107 bits (266), Expect = 4.530e-25
Identity = 55/140 (39.29%), Postives = 79/140 (56.43%), Query Frame = 1
Query:    1 PFLGGVSRMVGHFPVFFKTNDEHSFVVDKAKQAETMVKVKAYVESGGGLSLFPEGKINRNPETICPFRRGTFSLIEEMDMPVVVLSTVGCSDAWPRENAVGGLPARVLMKL----IEVTKAGEGLSAATIQEKAEAIMQE 408
            P  GGV   VGHFPV+F ++ + +F VDK KQA    +V A++  GG L  FPEG +NR PET+  FR GTF+ I E  +PV  +  VG    WP +   GGLPA V +++    I+  +      A  +Q++ + +  E
Sbjct:  171 PIFGGVFNRVGHFPVYFTSDADGNFQVDKEKQAVVQERVNAHLRRGGSLVFFPEGTVNRTPETLKAFRFGTFATIMEHRLPVYYMVAVGGEKTWPPQMPYGGLPADVHIRIGRFPIDFDQESSKSVAVRLQQRMQQVRDE 310          
BLAST of mRNA_M-pyrifera_M_contig11294.2690.1 vs. uniprot
Match: S9V5Y4_9TRYP (Acyltransferase, copy 2 n=1 Tax=Strigomonas culicis TaxID=28005 RepID=S9V5Y4_9TRYP)

HSP 1 Score: 103 bits (257), Expect = 8.520e-24
Identity = 53/145 (36.55%), Postives = 81/145 (55.86%), Query Frame = 1
Query:    1 PFLGGVSRMVGHFPVFFKTNDEHSFVVDKAKQAETMVKVKAYVESGGGLSLFPEGKINRNPETICPFRRGTFSLIEEMDMPVVVLSTVGCSDAWPRENAVGGLPARVLMKL----IEVTKAGEGLSAATIQEKAEAIMQESVTFM 423
            P  GG    VGHFPV+FK++++  F VDK KQA   + V ++V  GG L++FPEG +NR PE + PFR GTF+ + +  M +  + +VG +  WP     GG PA + +++    ++         AA +QE  + +  E V  M
Sbjct:  164 PIFGGCFDRVGHFPVYFKSDEDGKFQVDKEKQAVVQLAVDSHVAHGGNLAIFPEGAVNRTPERLQPFRFGTFATVFQHKMELYYMVSVGNNVTWPANAPSGGFPADIRVRVGAYPVDFATQESKQVAAEMQEHMQKVYNEMVQEM 308          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11294.2690.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KMQ7_9PHAE4.250e-6166.91PlsC domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835Z6S5_9STRA4.020e-3341.84Acyltransferase-like protein, copy 2 n=1 Tax=Tribo... [more]
A0A0N0DSH2_9TRYP2.670e-2638.57Putative mitochondrial acyltransferase-like protei... [more]
A0A0N1HTP4_LEPSE3.310e-2650.00PlsC domain-containing protein n=1 Tax=Leptomonas ... [more]
A0A0N0VDN6_9TRYP1.030e-2548.08Putative mitochondrial acyltransferase n=1 Tax=Lep... [more]
A0A0N0P455_LEPSE2.250e-2543.24Acyltransferase-like protein copy 2 n=1 Tax=Leptom... [more]
S9W582_9TRYP3.700e-2543.64Acyltransferase, putative n=1 Tax=Angomonas deanei... [more]
A0A7S0DPX5_9EUKA4.230e-2538.46Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A836H9Y0_9TRYP4.530e-2539.29PlsC domain-containing protein n=1 Tax=Leishmania ... [more]
S9V5Y4_9TRYP8.520e-2436.55Acyltransferase, copy 2 n=1 Tax=Strigomonas culici... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11294contigM-pyrifera_M_contig11294:4933..6209 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score171.4
Seed ortholog evalue2.8e-40
Seed eggNOG ortholog2880.D7FWP2
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Acyltransferase
EggNOG OGs2DZHH@1,2S71D@2759
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size423
Cds size399
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11294.2690.1prot_M-pyrifera_M_contig11294.2690.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig11294 4933..6185 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815643.0284812-CDS-M-pyrifera_M_contig11294:4932..52411622815643.0284812-CDS-M-pyrifera_M_contig11294:4932..5241Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11294 4933..5241 -
1692277501.7228234-CDS-M-pyrifera_M_contig11294:4932..52411692277501.7228234-CDS-M-pyrifera_M_contig11294:4932..5241Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11294 4933..5241 -
1622815643.0457542-CDS-M-pyrifera_M_contig11294:6095..61851622815643.0457542-CDS-M-pyrifera_M_contig11294:6095..6185Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11294 6096..6185 -
1692277501.7394304-CDS-M-pyrifera_M_contig11294:6095..61851692277501.7394304-CDS-M-pyrifera_M_contig11294:6095..6185Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11294 6096..6185 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815643.0624464-UTR-M-pyrifera_M_contig11294:6185..62091622815643.0624464-UTR-M-pyrifera_M_contig11294:6185..6209Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11294 6186..6209 -
1692277501.7510014-UTR-M-pyrifera_M_contig11294:6185..62091692277501.7510014-UTR-M-pyrifera_M_contig11294:6185..6209Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11294 6186..6209 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig11294.2690.1

>prot_M-pyrifera_M_contig11294.2690.1 ID=prot_M-pyrifera_M_contig11294.2690.1|Name=mRNA_M-pyrifera_M_contig11294.2690.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=133bp
MVGHFPVFFKTNDEHSFVVDKAKQAETMVKVKAYVESGGGLSLFPEGKIN
RNPETICPFRRGTFSLIEEMDMPVVVLSTVGCSDAWPRENAVGGLPARVL
MKLIEVTKAGEGLSAATIQEKAEAIMQESVTFM
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mRNA from alignment at M-pyrifera_M_contig11294:4933..6209-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig11294.2690.1 ID=mRNA_M-pyrifera_M_contig11294.2690.1|Name=mRNA_M-pyrifera_M_contig11294.2690.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1277bp|location=Sequence derived from alignment at M-pyrifera_M_contig11294:4933..6209- (Macrocystis pyrifera P11B4 male)
CCGTTTCTCGGCGGCGTGAGCCGAATGGTGGGCCACTTCCCCGTGTTCTT CAAAACCAACGACGAACACTCTTTCGTCGTGGACAAAGCCAAGCAGGCGG AAACAATGGTCAAGGTGAATGCATCAATCGTTCTGTTGTGCACTGATTTG ATACGCACTCACTTGCGGCTGCTTTGCTGTACATACAACATATAGCTGCA GCAAGATACCTGGTAATGTTACATCATGTTTTTGATTGTAGTTTCGAAGT TGAAATGCCTCACTATTGGAATATGTACATATGCACAGGAATTGCAGCGT ATCTGGTACGTTTCATTGATATTTAACATGAACACGTGGTATTATTATGT GTTTTCGAGCTGTGAGTTGTGGACAGAGACTTGGAAACCCCTTGTTTGCC ATTCTACTTTGGCGACGATATGCAGCACGGAGGCACAACGACGGCGTTTT TTCGTGCCTCTTGGACGTGCGAACCGCTTCCTACACAAACGCCATTCTCA ACAAAAACGCGATGCAGTTGCGAGATGCGAGGTTGCGGGCGACCCTGCCT CTTCGTCCACCCGTAGCCGATGACTAGGGACTGACTGTGTGTCGCTTCAA AGGACGGCGAATTGGCTCATACTACACAGAAATACATTTTCACAACTTTC TTGCACGACCCTCAAGCATGATGCCTATCTAGCGGCTCAATTATTGTCCC CAAGCTTCATTTCAGGTCCCACGTAGGACACGACCGCTAGCAACGGCAAT TTACGCTCTTCAATGTGCTGTATGTGCTGTATGTACCAGTATAATATATA CACCATTAACCCTCCCACCCTTCACCTGCCGTAAAAGGAATCCTCGTGTT CGACCCCCCCCGCGCTGCCGCGATAGCCACTGGACTGGATCTTTTTTCTG TTATGCCCAAGGCGTCCTTATTCTTGTTCCTATATTATTGTTGTTGACTG ATCTCTACCCCTGTTAAGGTCAAAGCGTATGTTGAGTCGGGCGGGGGCCT GTCTCTGTTCCCCGAGGGGAAGATCAACCGGAACCCGGAAACTATCTGCC CTTTCAGGAGAGGGACGTTTTCCCTCATCGAGGAAATGGACATGCCCGTA GTCGTCCTCAGCACCGTTGGCTGCAGCGACGCCTGGCCCAGGGAGAACGC GGTGGGAGGGCTGCCCGCGAGAGTACTGATGAAGCTCATCGAAGTGACTA AGGCCGGGGAAGGGCTGTCTGCCGCGACTATCCAGGAGAAGGCGGAGGCG ATTATGCAGGAAAGCGTGACGTTCATG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig11294:4933..6209-

>mRNA_M-pyrifera_M_contig11294.2690.1 ID=mRNA_M-pyrifera_M_contig11294.2690.1|Name=mRNA_M-pyrifera_M_contig11294.2690.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=798bp|location=Sequence derived from alignment at M-pyrifera_M_contig11294:4933..6209- (Macrocystis pyrifera P11B4 male)
ATGGTGGGCCACTTCCCCGTGTTCTTCAAAACCAACGACGAACACTCTTT
CGTCGTGGACAAAGCCAAGCAGGCGGAAACAATGGTCAAGATGGTGGGCC
ACTTCCCCGTGTTCTTCAAAACCAACGACGAACACTCTTTCGTCGTGGAC
AAAGCCAAGCAGGCGGAAACAATGGTCAAGGTCAAAGCGTATGTTGAGTC
GGGCGGGGGCCTGTCTCTGTTCCCCGAGGGGAAGATCAACCGGAACCCGG
AAACTATCTGCCCTTTCAGGAGAGGGACGTTTTCCCTCATCGAGGAAATG
GACATGCCCGTAGTCGTCCTCAGCACCGTTGGCTGCAGCGACGCCTGGCC
CAGGGAGAACGCGGTGGGAGGGCTGCCCGCGAGAGTACTGATGAAGCTCA
TCGAAGTGACTAAGGCCGGGGAAGGGCTGTCTGCCGCGACTATCCAGGAG
AAGGCGGAGGCGATTATGCAGGAAAGCGTGACGTTCATGGTCAAAGCGTA
TGTTGAGTCGGGCGGGGGCCTGTCTCTGTTCCCCGAGGGGAAGATCAACC
GGAACCCGGAAACTATCTGCCCTTTCAGGAGAGGGACGTTTTCCCTCATC
GAGGAAATGGACATGCCCGTAGTCGTCCTCAGCACCGTTGGCTGCAGCGA
CGCCTGGCCCAGGGAGAACGCGGTGGGAGGGCTGCCCGCGAGAGTACTGA
TGAAGCTCATCGAAGTGACTAAGGCCGGGGAAGGGCTGTCTGCCGCGACT
ATCCAGGAGAAGGCGGAGGCGATTATGCAGGAAAGCGTGACGTTCATG
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